Article ; Online: Multi-Omics Strategies for Investigating the Microbiome in Toxicology Research.
Toxicological sciences : an official journal of the Society of Toxicology
2022 Volume 187, Issue 2, Page(s) 189–213
Abstract: Microbial communities on and within the host contact environmental pollutants, toxic compounds, and other xenobiotic compounds. These communities of bacteria, fungi, viruses, and archaea possess diverse metabolic potential to catabolize compounds and ... ...
Abstract | Microbial communities on and within the host contact environmental pollutants, toxic compounds, and other xenobiotic compounds. These communities of bacteria, fungi, viruses, and archaea possess diverse metabolic potential to catabolize compounds and produce new metabolites. Microbes alter chemical disposition thus making the microbiome a natural subject of interest for toxicology. Sequencing and metabolomics technologies permit the study of microbiomes altered by acute or long-term exposure to xenobiotics. These investigations have already contributed to and are helping to re-interpret traditional understandings of toxicology. The purpose of this review is to provide a survey of the current methods used to characterize microbes within the context of toxicology. This will include discussion of commonly used techniques for conducting omic-based experiments, their respective strengths and deficiencies, and how forward-looking techniques may address present shortcomings. Finally, a perspective will be provided regarding common assumptions that currently impede microbiome studies from producing causal explanations of toxicologic mechanisms. |
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MeSH term(s) | Bacteria ; Gastrointestinal Microbiome ; Metabolomics/methods ; Microbiota ; Xenobiotics/toxicity |
Chemical Substances | Xenobiotics |
Language | English |
Publishing date | 2022-03-14 |
Publishing country | United States |
Document type | Journal Article ; Review ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, N.I.H., Extramural |
ZDB-ID | 1420885-4 |
ISSN | 1096-0929 ; 1096-6080 |
ISSN (online) | 1096-0929 |
ISSN | 1096-6080 |
DOI | 10.1093/toxsci/kfac029 |
Database | MEDical Literature Analysis and Retrieval System OnLINE |
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