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  1. AU="O'Connell, Killian C"
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  1. Article ; Online: Integrated membranes within centrifugal microfluidic devices: a review.

    O'Connell, Killian C / Landers, James P

    Lab on a chip

    2023  Volume 23, Issue 14, Page(s) 3130–3159

    Abstract: Centrifugal microfluidics has evolved into a sophisticated technology capable of enabling the exploration of fundamental questions in such fields as protein analysis, environmental monitoring, and live cell handling. These microdevices also hold unique ... ...

    Abstract Centrifugal microfluidics has evolved into a sophisticated technology capable of enabling the exploration of fundamental questions in such fields as protein analysis, environmental monitoring, and live cell handling. These microdevices also hold unique potential for translating promising academic research into many real-world scenarios, with several products already available on the market. Yet, in order to fully realize this potentially transformative technology, there remains an outstanding need to incorporate simple to operate world-to-chip interfaces alongside the integration and automation of complex workflows. This requires cost-effective and versatile materials that are, ideally, already commercially available. Membranes not only meet these exigencies, they are also capable of enhancing the inherent advantages of microdevices when thoughtfully combined. This review provides an overview of the importance of these two technologies and the manifold benefits upon their unification. The fundamental principles governing fluid flow with centrifugal actuation, as well as within porous membranes, are briefly covered in addition to a comment on their relative advantages compared to classical microdevices and porous media. The major subtypes in membrane composition, preparation, and microfluidic integration strategies are next discussed in detail, along with their relativistic capabilities and drawbacks. This is followed by recent examples in the literature displaying the enormous versatility membranes have already demonstrated within microfluidic devices, highlighting recent centrifugal microdevices wherever possible. Finally, recommendations for areas where the incorporation of these materials still face challenges, as well as possible new avenues for exploration, are also provided.
    Language English
    Publishing date 2023-07-12
    Publishing country England
    Document type Journal Article ; Review
    ZDB-ID 2056646-3
    ISSN 1473-0189 ; 1473-0197
    ISSN (online) 1473-0189
    ISSN 1473-0197
    DOI 10.1039/d3lc00175j
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Dielectric heating of highly corrosive and oxidizing reagents on a hybrid glass microfiber-polymer centrifugal microfluidic device.

    O'Connell, Killian C / Lawless, Nicola K / Stewart, Brennan M / Landers, James P

    Lab on a chip

    2022  Volume 22, Issue 13, Page(s) 2549–2565

    Abstract: Many assays necessitate the use of highly concentrated acids, powerful oxidizing agents, or a combination of the two. Although microfluidic devices offer vast potential for rapid analytical interrogation at the point-of-need (PON), they cannot escape the ...

    Abstract Many assays necessitate the use of highly concentrated acids, powerful oxidizing agents, or a combination of the two. Although microfluidic devices offer vast potential for rapid analytical interrogation at the point-of-need (PON), they cannot escape the fundamental requirement for reagent compatibility. Worse, many innovative protocols have been developed that would represent a significant improvement to current field-forward practices within their respective disciplines, but adoption falters due to chemical incompatibility with challenging reagents. Polymeric centrifugal microfluidic devices meet many of the needs for accommodating complex chemical or biochemical protocols in a multiplexed and automatable format. Yet, they also struggle to accommodate highly reactive chemical components long term. In this work, we report on a simple and inexpensive reagent storage strategy that bypasses the typical complexity involved with integration of liquid reagents on microfluidic devices. Moreover, we demonstrate microdevice compatibility and operation after six months of corrosive reagent storage as well as post dielectric heating. This new strategy allows for storage of multiple highly corrosive and oxidative reagents simultaneously, enhancing the possibilities for multistep assay integration at the PON for a diverse array of applications. Successful detection after one week of corrosive reagent storage of an illicit drug and neurotransmitter metabolite, for forensic and clinical applications, is demonstrated. Furthermore, environmental sample preparation
    MeSH term(s) Caustics ; Heating ; Indicators and Reagents ; Lab-On-A-Chip Devices ; Microfluidic Analytical Techniques ; Polymers
    Chemical Substances Caustics ; Indicators and Reagents ; Polymers
    Language English
    Publishing date 2022-06-28
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2056646-3
    ISSN 1473-0189 ; 1473-0197
    ISSN (online) 1473-0189
    ISSN 1473-0197
    DOI 10.1039/d2lc00221c
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Comparative Evaluation and Quantitative Analysis of Loop-Mediated Isothermal Amplification Indicators.

    Scott, Anchi T / Layne, Tiffany R / O'Connell, Killian C / Tanner, Nathan A / Landers, James P

    Analytical chemistry

    2020  Volume 92, Issue 19, Page(s) 13343–13353

    Abstract: Loop-mediated isothermal amplification (LAMP) as a diagnostic tool is rapidly gaining recognition and maturity. Among various advantages over traditional polymerase chain reaction, the ability to visually detect amplification by the incorporation of ... ...

    Abstract Loop-mediated isothermal amplification (LAMP) as a diagnostic tool is rapidly gaining recognition and maturity. Among various advantages over traditional polymerase chain reaction, the ability to visually detect amplification by the incorporation of colorimetric indicators is one of its most unique features. There is an overwhelming variety of LAMP indicators in the literature, yet a comprehensive comparative study is lacking. This study evaluates the use of hydroxynaphthol blue, phenol red, calcein, leuco crystal violet, malachite green, and a fluorescent dye for visual detection. A method for objective quantitative analysis using ImageJ is described that is readily implemented in standard and microfluidic workflows. The work here also includes the largest inter-reader variability study involving 24 participants to evaluate these indicators. We found inaccuracies in visual assessment as bias and/or individual-based perception can exist, solidifying the need for objective analysis. There was not a "universal" indicator, although considerations in sample preparation, storage, and applicability are discussed in length.
    MeSH term(s) Colorimetry ; Fluoresceins/analysis ; Fluoresceins/chemistry ; Fluorescent Dyes/chemistry ; Gentian Violet/chemistry ; Humans ; Indicators and Reagents/chemistry ; Lab-On-A-Chip Devices ; Molecular Diagnostic Techniques ; Naphthalenesulfonates/chemistry ; Nucleic Acid Amplification Techniques ; Phenolsulfonphthalein/chemistry ; Rosaniline Dyes/chemistry
    Chemical Substances Fluoresceins ; Fluorescent Dyes ; Indicators and Reagents ; Naphthalenesulfonates ; Rosaniline Dyes ; malachite green (12058M7ORO) ; trisodium 3-hydroxy-4-((2Z)-2-(2-oxo-4-sulfonatonaphthalen-1-ylidene)hydrazinyl)naphthalene-2,7-disulfonate (63451-35-4) ; Phenolsulfonphthalein (I6G9Y0J1OJ) ; Gentian Violet (J4Z741D6O5) ; fluorexon (V0YM2B16TS)
    Language English
    Publishing date 2020-09-21
    Publishing country United States
    Document type Comparative Study ; Journal Article ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 1508-8
    ISSN 1520-6882 ; 0003-2700
    ISSN (online) 1520-6882
    ISSN 0003-2700
    DOI 10.1021/acs.analchem.0c02666
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Microchip Electrophoresis for Fluorescence-Based Measurement of Polynucleic Acids: Recent Developments.

    Nouwairi, Renna L / O'Connell, Killian C / Gunnoe, Leah M / Landers, James P

    Analytical chemistry

    2020  Volume 93, Issue 1, Page(s) 367–387

    Language English
    Publishing date 2020-12-22
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1508-8
    ISSN 1520-6882 ; 0003-2700
    ISSN (online) 1520-6882
    ISSN 0003-2700
    DOI 10.1021/acs.analchem.0c04596
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Comparative Evaluation and Quantitative Analysis of Loop-Mediated Isothermal Amplification Indicators

    Scott, Anchi T / Layne, Tiffany R / O’Connell, Killian C / Tanner, Nathan A / Landers, James P

    Analytical chemistry. 2020 Aug. 25, v. 92, no. 19

    2020  

    Abstract: Loop-mediated isothermal amplification (LAMP) as a diagnostic tool is rapidly gaining recognition and maturity. Among various advantages over traditional polymerase chain reaction, the ability to visually detect amplification by the incorporation of ... ...

    Abstract Loop-mediated isothermal amplification (LAMP) as a diagnostic tool is rapidly gaining recognition and maturity. Among various advantages over traditional polymerase chain reaction, the ability to visually detect amplification by the incorporation of colorimetric indicators is one of its most unique features. There is an overwhelming variety of LAMP indicators in the literature, yet a comprehensive comparative study is lacking. This study evaluates the use of hydroxynaphthol blue, phenol red, calcein, leuco crystal violet, malachite green, and a fluorescent dye for visual detection. A method for objective quantitative analysis using ImageJ is described that is readily implemented in standard and microfluidic workflows. The work here also includes the largest inter-reader variability study involving 24 participants to evaluate these indicators. We found inaccuracies in visual assessment as bias and/or individual-based perception can exist, solidifying the need for objective analysis. There was not a “universal” indicator, although considerations in sample preparation, storage, and applicability are discussed in length.
    Keywords analytical chemistry ; colorimetry ; comparative study ; diagnostic techniques ; fluorescent dyes ; gentian violet ; loop-mediated isothermal amplification ; malachite green ; phenolsulfonphthalein ; polymerase chain reaction ; quantitative analysis
    Language English
    Dates of publication 2020-0825
    Size p. 13343-13353.
    Publishing place American Chemical Society
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 1508-8
    ISSN 1520-6882 ; 0003-2700
    ISSN (online) 1520-6882
    ISSN 0003-2700
    DOI 10.1021/acs.analchem.0c02666
    Database NAL-Catalogue (AGRICOLA)

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  6. Article ; Online: An ultrafast SARS-CoV-2 virus enrichment and extraction method compatible with multiple modalities for RNA detection.

    Dignan, Leah M / Turiello, Rachelle / Layne, Tiffany R / O'Connell, Killian C / Hickey, Jeff / Chapman, Jeff / Poulter, Melinda D / Landers, James P

    Analytica chimica acta

    2021  Volume 1180, Page(s) 338846

    Abstract: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a zoonotic RNA virus characterized by high transmission rates and pathogenicity worldwide. Continued control of the COVID-19 pandemic requires the diversification of rapid, easy to use, ... ...

    Abstract Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a zoonotic RNA virus characterized by high transmission rates and pathogenicity worldwide. Continued control of the COVID-19 pandemic requires the diversification of rapid, easy to use, sensitive, and portable methods for SARS-CoV-2 sample preparation and analysis. Here, we propose a method for SARS-CoV-2 viral enrichment and enzymatic extraction of RNA from clinically relevant matrices in under 10 min. This technique utilizes affinity-capture hydrogel particles to concentrate SARS-CoV-2 from solution, and leverages existing PDQeX technology for RNA isolation. Characterization of our method is accomplished with reverse transcription real-time polymerase chain reaction (RT-PCR) for relative, comparative RNA detection. In a double-blind study analyzing viral transport media (VTM) obtained from clinical nasopharyngeal swabs, our sample preparation method demonstrated both comparable results to a routinely used commercial extraction kit and 100% concordance with laboratory diagnoses. Compatibility of eluates with alternative forms of analysis was confirmed using microfluidic RT-PCR (μRT-PCR), recombinase polymerase amplification (RPA), and loop-mediated isothermal amplification (LAMP). The alternative methods explored here conveyed successful amplification from all RNA eluates originating from positive clinical samples. Finally, this method demonstrated high performance within a saliva matrix across a broad range of viral titers and dilutions up to 90% saliva matrix, and sets the stage for miniaturization to the microscale.
    MeSH term(s) COVID-19 ; COVID-19 Testing ; Humans ; Molecular Diagnostic Techniques ; Nucleic Acid Amplification Techniques ; Pandemics ; RNA, Viral/genetics ; SARS-CoV-2
    Chemical Substances RNA, Viral
    Language English
    Publishing date 2021-07-13
    Publishing country Netherlands
    Document type Journal Article ; Randomized Controlled Trial
    ZDB-ID 1483436-4
    ISSN 1873-4324 ; 0003-2670
    ISSN (online) 1873-4324
    ISSN 0003-2670
    DOI 10.1016/j.aca.2021.338846
    Database MEDical Literature Analysis and Retrieval System OnLINE

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