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Article ; Online: Fighting Bacterial Pathogens in the Lung: Platelets to the Rescue?

Olonisakin, Tolani F / Lee, Janet S

American journal of respiratory cell and molecular biology

2018 Volume 58, Issue 3, Page(s) 282–283

MeSH term(s)	Animals ; Blood Platelets/immunology ; Extracellular Traps/immunology ; Humans ; Lung/microbiology ; Mice ; Neutrophil Infiltration/immunology ; Neutrophils/immunology ; Pseudomonas aeruginosa/immunology ; Respiratory Tract Infections/immunology ; Respiratory Tract Infections/microbiology ; Respiratory Tract Infections/mortality ; Thrombocytopenia/immunology ; Thrombocytopenia/microbiology
Language	English
Publishing date	2018-03-14
Publishing country	United States
Document type	Editorial
ZDB-ID	1025960-0
ISSN	1535-4989 ; 1044-1549
ISSN (online)	1535-4989
ISSN	1044-1549
DOI	10.1165/rcmb.2017-0349ED
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Article ; Online: Local cytokine levels associate with SNOT-22 and UPSIT scores in chronic rhinosinusitis.

Yu, Sophie E / Chiang, Simon / Olonisakin, Tolani F / Moore, John A / Bergmark, Regan W / Maxfield, Alice Z / Roditi, Rachel E / Buchheit, Kathleen M / Lundberg, Marie / Mitchell, Margaret B / Lee, Stella E

International forum of allergy & rhinology

2023 Volume 14, Issue 1, Page(s) 114–118

Abstract: Key points: Elevated IL-5, IL-13, IL-33, and CCL2 correlate with lower UPSIT scores in CRS and AERD patients. Elevated IL-5, IL-13, TNF-α, CCL2, and CXCL-8 correlate with higher SNOT-22 scores in CRS and AERD patients. ...

Abstract	Key points: Elevated IL-5, IL-13, IL-33, and CCL2 correlate with lower UPSIT scores in CRS and AERD patients. Elevated IL-5, IL-13, TNF-α, CCL2, and CXCL-8 correlate with higher SNOT-22 scores in CRS and AERD patients.
MeSH term(s)	Humans ; Cytokines ; Interleukin-13 ; Sino-Nasal Outcome Test ; Interleukin-5 ; Rhinosinusitis ; Rhinitis/diagnosis ; Nasal Polyps ; Sinusitis/diagnosis ; Chronic Disease
Chemical Substances	Cytokines ; Interleukin-13 ; Interleukin-5
Language	English
Publishing date	2023-07-11
Publishing country	United States
Document type	Journal Article
ZDB-ID	2625826-2
ISSN	2042-6984 ; 2042-6976
ISSN (online)	2042-6984
ISSN	2042-6976
DOI	10.1002/alr.23222
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Zs.A 6927: Show issues

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Article ; Online: Fractional Exhaled Nitric Oxide as a Marker of Mucosal Inflammation in Chronic Rhinosinusitis.

Olonisakin, Tolani F / Moore, John A / Barel, Stephanie / Uribe, Bliss / Parker, Dana M / Bowers, Eve M R / Nouraie, Seyed M / Wenzel, Sally E / Lee, Stella E

American journal of rhinology & allergy

2022 Volume 36, Issue 4, Page(s) 465–472

Abstract: Background: Fractional exhaled nitric oxide (FeNO) is a cost-effective, noninvasive point-of-care test that has proven valuable in identifying patients with lower airway inflammation and predicting the likelihood of responsiveness to inhaled ... ...

Abstract	Background: Fractional exhaled nitric oxide (FeNO) is a cost-effective, noninvasive point-of-care test that has proven valuable in identifying patients with lower airway inflammation and predicting the likelihood of responsiveness to inhaled corticosteroid therapy in asthma. The utility of FeNO in upper airway disease, specifically in CRS, remains to be determined. Objective: The goal of this study was to test whether FeNO could serve as a noninvasive marker of sinonasal mucosal inflammation in CRS patients. Methods: FeNO was obtained using a nitric oxide analyzer (NIOX VERO) as well as nasal mucus, the 22-item Sinonasal Outcome Test (SNOT-22), University of Pennsylvania Smell Identification Test (UPSIT), and Lund-Kennedy endoscopic scores concurrently in 112 CRS patients. Nasal mucus was analyzed for cytokine expression using solid-phase sandwich ELISA. Linear regression with Spearman correlation coefficient was used to determine strength of relationship between variables. Results: CRS patients showed elevated FeNO levels with asthma (47.12 ± 5.21 ppb) or without asthma (43.24 ± 9.810 ppb). Elevated FeNO levels correlated with sinonasal mucosal inflammation, as determined by increased levels of CCL26 and TNFα in nasal mucus obtained from CRS patients. Furthermore, elevated FeNO levels selectively correlated with worsened SNOT-22 nasal symptoms (P = 0.03) and Lund-Kennedy endoscopic scores (P = 0.007), but did not correlate with UPSIT scores. Conclusions: FeNO levels correlated with increased sinonasal mucosal inflammation and symptom severity in CRS regardless of asthma status. FeNO measurements may serve as a quick and noninvasive marker in evaluating CRS patients.
MeSH term(s)	Humans ; Fractional Exhaled Nitric Oxide Testing ; Rhinitis/diagnosis ; Rhinitis/metabolism ; Nitric Oxide/metabolism ; Breath Tests ; Sinusitis/diagnosis ; Sinusitis/metabolism ; Asthma/diagnosis ; Inflammation/diagnosis ; Chronic Disease
Chemical Substances	Nitric Oxide (31C4KY9ESH)
Language	English
Publishing date	2022-03-03
Publishing country	United States
Document type	Journal Article
ZDB-ID	2482804-X
ISSN	1945-8932 ; 1945-8924
ISSN (online)	1945-8932
ISSN	1945-8924
DOI	10.1177/19458924221080260
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Zs.A 2542: Show issues

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Article ; Online: Inhibiting the type 2 inflammatory pathway with dupilumab is associated with an increase in interleukin-4 and interleukin-18 production.

Morris, Jymirah / Olonisakin, Tolani F / Moore, John A / Phan, BaDoi / Parker, Dana M / Uribe, Bliss A / Barel, Stephanie J / Bowers, Eve M R / Buchheit, Kathleen M / Laidlaw, Tanya M / Lee, Stella E

International forum of allergy & rhinology

2022 Volume 12, Issue 10, Page(s) 1313–1316

MeSH term(s)	Antibodies, Monoclonal, Humanized ; Chronic Disease ; Humans ; Interleukin-18 ; Interleukin-4/metabolism ; Nasal Polyps/complications ; Rhinitis/metabolism ; Sinusitis/metabolism
Chemical Substances	Antibodies, Monoclonal, Humanized ; Interleukin-18 ; Interleukin-4 (207137-56-2) ; dupilumab (420K487FSG)
Language	English
Publishing date	2022-04-29
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2625826-2
ISSN	2042-6984 ; 2042-6976
ISSN (online)	2042-6984
ISSN	2042-6976
DOI	10.1002/alr.23003
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Article ; Online: Response to Neoadjuvant Targeted Therapy in Operable Head and Neck Cancer Confers Survival Benefit.

Mascarella, Marco A / Olonisakin, Tolani F / Rumde, Purva / Vendra, Varun / Nance, Melonie A / Kim, Seungwon / Kubik, Mark W / Sridharan, Shaum S / Ferris, Robert L / Fenton, Moon J / Clayburgh, Daniel R / Ohr, James P / Joyce, Sonali C / Sen, Malabika / Herman, James G / Grandis, Jennifer R / Zandberg, Dan P / Duvvuri, Umamaheswar

Clinical cancer research : an official journal of the American Association for Cancer Research

2023 Volume 29, Issue 4, Page(s) 723–730

Abstract: Purpose: Neoadjuvant targeted therapy provides a brief, preoperative window of opportunity that can be exploited to individualize cancer care based on treatment response. We investigated whether response to neoadjuvant therapy during the preoperative ... ...

Abstract	Purpose: Neoadjuvant targeted therapy provides a brief, preoperative window of opportunity that can be exploited to individualize cancer care based on treatment response. We investigated whether response to neoadjuvant therapy during the preoperative window confers survival benefit in patients with operable head and neck squamous cell carcinoma (HNSCC). Patients and methods: A pooled analysis of treatment-naïve patients with operable HNSCC enrolled in one of three clinical trials from 2009 to 2020 (NCT00779389, NCT01218048, NCT02473731). Neoadjuvant regimens consisted of EGFR inhibitors (n = 83) or anti-ErbB3 antibody therapy (n = 9) within 28 days of surgery. Clinical to pathologic stage migration was compared with disease-free survival (DFS) and overall survival (OS) while adjusting for confounding factors using multivariable Cox regression. Circulating tumor markers validated in other solid tumor models were analyzed. Results: 92 of 118 patients were analyzed; all patients underwent surgery following neoadjuvant therapy. Clinical to pathologic downstaging was more frequent in patients undergoing neoadjuvant targeted therapy compared with control cohort (P = 0.048). Patients with pathologic downstage migration had the highest OS [89.5%; 95% confidence interval (CI), 75.7-100] compared with those with no stage change (58%; 95% CI, 46.2-69.8) or upstage (40%; 95% CI, 9.6-70.4; P = 0.003). Downstage migration remained a positive prognostic factor for OS (HR, 0.22; 95% CI, 0.05-0.90) while adjusting for measured confounders. Downstage migration correlated with decreased circulating tumor markers, SOX17 and TAC1 (P = 0.0078). Conclusions: Brief neoadjuvant therapy achieved pathologic downstaging in a subset of patients and was associated with significantly better DFS and OS as well as decreased circulating methylated SOX17 and TAC1.
MeSH term(s)	Humans ; Neoadjuvant Therapy ; Squamous Cell Carcinoma of Head and Neck/drug therapy ; Head and Neck Neoplasms/drug therapy ; Disease-Free Survival ; Biomarkers, Tumor
Chemical Substances	Biomarkers, Tumor
Language	English
Publishing date	2023-01-03
Publishing country	United States
Document type	Journal Article ; Research Support, N.I.H., Extramural ; Research Support, U.S. Gov't, Non-P.H.S.
ZDB-ID	1225457-5
ISSN	1557-3265 ; 1078-0432
ISSN (online)	1557-3265
ISSN	1078-0432
DOI	10.1158/1078-0432.CCR-22-1768
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Zs.A 4223: Show issues

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Article ; Online: In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection.

Bain, William / Ahn, Brian / Peñaloza, Hernán F / McElheny, Christi L / Tolman, Nathanial / van der Geest, Rick / Gonzalez-Ferrer, Shekina / Chen, Nathalie / An, Xiaojing / Hosuru, Ria / Tabary, Mohammadreza / Papke, Erin / Kohli, Naina / Farooq, Nauman / Bachman, William / Olonisakin, Tolani F / Xiong, Zeyu / Griffith, Marissa P / Sullivan, Mara /

Franks, Jonathan / Mustapha, Mustapha M / Iovleva, Alina / Suber, Tomeka / Shanks, Robert Q / Ferreira, Viviana P / Stolz, Donna B / Van Tyne, Daria / Doi, Yohei / Lee, Janet S

The Journal of infectious diseases

2024

Abstract: Background: Klebsiella pneumoniae carbapenemase-producing K. pneumoniae (KPC-Kp) bloodstream infections are associated with high mortality. We studied clinical bloodstream KPC-Kp isolates to investigate mechanisms of resistance to complement, a key host ...

Abstract	Background: Klebsiella pneumoniae carbapenemase-producing K. pneumoniae (KPC-Kp) bloodstream infections are associated with high mortality. We studied clinical bloodstream KPC-Kp isolates to investigate mechanisms of resistance to complement, a key host defense against bloodstream infection. Methods: We tested growth of KPC-Kp isolates in human serum. In serial isolates from a single patient, we performed whole genome sequencing and tested for complement resistance and binding by mixing study, direct ELISA, flow cytometry, and electron microscopy. We utilized an isogenic deletion mutant in phagocytosis assays and an acute lung infection model. Results: We found serum resistance in 16 of 59 (27%) KPC-Kp clinical bloodstream isolates. In five genetically-related bloodstream isolates from a single patient, we noted a loss-of-function mutation in the capsule biosynthesis gene, wcaJ. Disruption of wcaJ was associated with decreased polysaccharide capsule, resistance to complement-mediated killing, and surprisingly, increased binding of complement proteins. Furthermore, an isogenic wcaJ deletion mutant exhibited increased opsono-phagocytosis in vitro and impaired in vivo control in the lung after airspace macrophage depletion in mice. Conclusions: Loss of function in wcaJ led to increased complement resistance, complement binding, and opsono-phagocytosis, which may promote KPC-Kp persistence by enabling co-existence of increased bloodstream fitness and reduced tissue virulence.
Language	English
Publishing date	2024-01-25
Publishing country	United States
Document type	Journal Article
ZDB-ID	3019-3
ISSN	1537-6613 ; 0022-1899
ISSN (online)	1537-6613
ISSN	0022-1899
DOI	10.1093/infdis/jiae003
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Article ; Online: Thrombospondin-1 Restricts Interleukin-36γ-Mediated Neutrophilic Inflammation during Pseudomonas aeruginosa Pulmonary Infection.

Peñaloza, Hernán F / Olonisakin, Tolani F / Bain, William G / Qu, Yanyan / van der Geest, Rick / Zupetic, Jill / Hulver, Mei / Xiong, Zeyu / Newstead, Michael W / Zou, Chunbin / Alder, Jonathan K / Ybe, Joel A / Standiford, Theodore J / Lee, Janet S

mBio

2021 Volume 12, Issue 2

Abstract: Interleukin-36γ (IL-36γ), a member of the IL-1 cytokine superfamily, amplifies lung inflammation and impairs host defense during acute ... ...

Abstract	Interleukin-36γ (IL-36γ), a member of the IL-1 cytokine superfamily, amplifies lung inflammation and impairs host defense during acute pulmonary
MeSH term(s)	Animals ; Female ; Host-Pathogen Interactions ; Inflammation/microbiology ; Interleukin-1/classification ; Interleukin-1/immunology ; Lung/immunology ; Lung/microbiology ; Male ; Mice ; Mice, Inbred C57BL ; Mice, Knockout ; Neutrophil Infiltration ; Neutrophils/enzymology ; Neutrophils/immunology ; Pseudomonas Infections/immunology ; Pseudomonas Infections/microbiology ; Pseudomonas aeruginosa/immunology ; Pseudomonas aeruginosa/pathogenicity ; Thrombospondin 1/genetics ; Thrombospondin 1/immunology
Chemical Substances	Interleukin-1 ; Thrombospondin 1 ; interleukin-36, mouse ; Thbs1 protein, mouse
Language	English
Publishing date	2021-04-06
Publishing country	United States
Document type	Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
ZDB-ID	2557172-2
ISSN	2150-7511 ; 2161-2129
ISSN (online)	2150-7511
ISSN	2161-2129
DOI	10.1128/mBio.03336-20
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Article: In vivo

Franks, Jonathan / Mustapha, Mustapha M / Iovleva, Alina / Suber, Tomeka / Shanks, Robert Q / Ferreira, Viviana P / Stolz, Donna B / Van Tyne, Daria / Doi, Yohei / Lee, Janet S

bioRxiv : the preprint server for biology

2023

Abstract: Klebsiella ... ...

Abstract	Klebsiella pneumoniae
Language	English
Publishing date	2023-06-01
Publishing country	United States
Document type	Preprint
DOI	10.1101/2023.05.31.542722
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Article ; Online: A checklist is associated with increased quality of reporting preclinical biomedical research: A systematic review.

Han, SeungHye / Olonisakin, Tolani F / Pribis, John P / Zupetic, Jill / Yoon, Joo Heung / Holleran, Kyle M / Jeong, Kwonho / Shaikh, Nader / Rubio, Doris M / Lee, Janet S

PloS one

2017 Volume 12, Issue 9, Page(s) e0183591

Abstract: Irreproducibility of preclinical biomedical research has gained recent attention. It is suggested that requiring authors to complete a checklist at the time of manuscript submission would improve the quality and transparency of scientific reporting, and ... ...

Abstract	Irreproducibility of preclinical biomedical research has gained recent attention. It is suggested that requiring authors to complete a checklist at the time of manuscript submission would improve the quality and transparency of scientific reporting, and ultimately enhance reproducibility. Whether a checklist enhances quality and transparency in reporting preclinical animal studies, however, has not been empirically studied. Here we searched two highly cited life science journals, one that requires a checklist at submission (Nature) and one that does not (Cell), to identify in vivo animal studies. After screening 943 articles, a total of 80 articles were identified in 2013 (pre-checklist) and 2015 (post-checklist), and included for the detailed evaluation of reporting methodological and analytical information. We compared the quality of reporting preclinical animal studies between the two journals, accounting for differences between journals and changes over time in reporting. We find that reporting of randomization, blinding, and sample-size estimation significantly improved when comparing Nature to Cell from 2013 to 2015, likely due to implementation of a checklist. Specifically, improvement in reporting of the three methodological information was at least three times greater when a mandatory checklist was implemented than when it was not. Reporting the sex of animals and the number of independent experiments performed also improved from 2013 to 2015, likely from factors not related to a checklist. Our study demonstrates that completing a checklist at manuscript submission is associated with improved reporting of key methodological information in preclinical animal studies.
MeSH term(s)	Animals ; Biomedical Research/standards ; Biomedical Research/statistics & numerical data ; Checklist ; Data Accuracy ; Drug Evaluation, Preclinical/standards ; Humans ; Models, Animal ; Publications/standards ; Publications/statistics & numerical data ; Reproducibility of Results ; Research Design/standards
Language	English
Publishing date	2017-09-13
Publishing country	United States
Document type	Journal Article ; Review ; Systematic Review
ISSN	1932-6203
ISSN (online)	1932-6203
DOI	10.1371/journal.pone.0183591
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Article ; Online: Severe Acute Respiratory Syndrome Coronavirus 2 Viremia Is Associated With Coronavirus Disease 2019 Severity and Predicts Clinical Outcomes.

Jacobs, Jana L / Bain, William / Naqvi, Asma / Staines, Brittany / Castanha, Priscila M S / Yang, Haopu / Boltz, Valerie F / Barratt-Boyes, Simon / Marques, Ernesto T A / Mitchell, Stephanie L / Methé, Barbara / Olonisakin, Tolani F / Haidar, Ghady / Burke, Thomas W / Petzold, Elizabeth / Denny, Thomas / Woods, Chris W / McVerry, Bryan J / Lee, Janet S /

Watkins, Simon C / St Croix, Claudette M / Morris, Alison / Kearney, Mary F / Ladinsky, Mark S / Bjorkman, Pamela J / Kitsios, Georgios D / Mellors, John W

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

2021 Volume 74, Issue 9, Page(s) 1525–1533

Abstract: Background: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral RNA (vRNA) is detected in the bloodstream of some patients with coronavirus disease 2019 (COVID-19), but it is not clear whether this RNAemia reflects viremia (ie, virus ... ...

Abstract	Background: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral RNA (vRNA) is detected in the bloodstream of some patients with coronavirus disease 2019 (COVID-19), but it is not clear whether this RNAemia reflects viremia (ie, virus particles) and how it relates to host immune responses and outcomes. Methods: SARS-CoV-2 vRNA was quantified in plasma samples from observational cohorts of 51 COVID-19 patients including 9 outpatients, 19 hospitalized (non-intensive care unit [ICU]), and 23 ICU patients. vRNA levels were compared with cross-sectional indices of COVID-19 severity and prospective clinical outcomes. We used multiple imaging methods to visualize virions in plasma. Results: SARS-CoV-2 vRNA was detected in plasma of 100%, 52.6%, and 11.1% of ICU, non-ICU, and outpatients, respectively. Virions were detected in plasma pellets using electron tomography and immunostaining. Plasma vRNA levels were significantly higher in ICU > non-ICU > outpatients (P < .0001); for inpatients, plasma vRNA levels were strongly associated with higher World Health Organization (WHO) score at admission (P = .01), maximum WHO score (P = .002), and discharge disposition (P = .004). A plasma vRNA level >6000 copies/mL was strongly associated with mortality (hazard ratio, 10.7). Levels of vRNA were significantly associated with several inflammatory biomarkers (P < .01) but not with plasma neutralizing antibody titers (P = .8). Conclusions: Visualization of virus particles in plasma indicates that SARS-CoV-2 RNAemia is due, at least in part, to viremia. The levels of SARS-CoV-2 RNAemia correlate strongly with disease severity, patient outcome, and specific inflammatory biomarkers but not with neutralizing antibody titers.
MeSH term(s)	Antibodies, Neutralizing ; Biomarkers ; COVID-19/diagnosis ; Cross-Sectional Studies ; Humans ; Prospective Studies ; RNA, Viral ; SARS-CoV-2 ; Viremia
Chemical Substances	Antibodies, Neutralizing ; Biomarkers ; RNA, Viral
Language	English
Publishing date	2021-08-11
Publishing country	United States
Document type	Journal Article ; Observational Study
ZDB-ID	1099781-7
ISSN	1537-6591 ; 1058-4838
ISSN (online)	1537-6591
ISSN	1058-4838
DOI	10.1093/cid/ciab686
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