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  1. Article ; Online: An iterative and targeted sampling design informed by habitat suitability models for detecting focal plant species over extensive areas.

    Ophelia Wang / Luke J Zachmann / Steven E Sesnie / Aaryn D Olsson / Brett G Dickson

    PLoS ONE, Vol 9, Iss 7, p e

    2014  Volume 101196

    Abstract: Prioritizing areas for management of non-native invasive plants is critical, as invasive plants can negatively impact plant community structure. Extensive and multi-jurisdictional inventories are essential to prioritize actions aimed at mitigating the ... ...

    Abstract Prioritizing areas for management of non-native invasive plants is critical, as invasive plants can negatively impact plant community structure. Extensive and multi-jurisdictional inventories are essential to prioritize actions aimed at mitigating the impact of invasions and changes in disturbance regimes. However, previous work devoted little effort to devising sampling methods sufficient to assess the scope of multi-jurisdictional invasion over extensive areas. Here we describe a large-scale sampling design that used species occurrence data, habitat suitability models, and iterative and targeted sampling efforts to sample five species and satisfy two key management objectives: 1) detecting non-native invasive plants across previously unsampled gradients, and 2) characterizing the distribution of non-native invasive plants at landscape to regional scales. Habitat suitability models of five species were based on occurrence records and predictor variables derived from topography, precipitation, and remotely sensed data. We stratified and established field sampling locations according to predicted habitat suitability and phenological, substrate, and logistical constraints. Across previously unvisited areas, we detected at least one of our focal species on 77% of plots. In turn, we used detections from 2011 to improve habitat suitability models and sampling efforts in 2012, as well as additional spatial constraints to increase detections. These modifications resulted in a 96% detection rate at plots. The range of habitat suitability values that identified highly and less suitable habitats and their environmental conditions corresponded to field detections with mixed levels of agreement. Our study demonstrated that an iterative and targeted sampling framework can address sampling bias, reduce time costs, and increase detections. Other studies can extend the sampling framework to develop methods in other ecosystems to provide detection data. The sampling methods implemented here provide a meaningful tool when ...
    Keywords Medicine ; R ; Science ; Q
    Subject code 333 ; 580
    Language English
    Publishing date 2014-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  2. Article: WorldView-2 High Spatial Resolution Improves Desert Invasive Plant Detection

    Sankey, Temuulen / Brett Dickson / Steve Sesnie / Ophelia Wang / Aaron Olsson / Luke Zachmann

    Photogrammetric engineering and remote sensing. 2014 Sept. 1, v. 80, no. 9

    2014  

    Abstract: ... Sahara mustard (Brassica tournefortii) is an invasive species common to the Mojave and Sonoran Deserts in the southwestern US. Our objective was to assess WorldView-2 (WV2) satellite imagery potential to detect Sahara mustard presence, cover, and ... ...

    Abstract

    Sahara mustard (Brassica tournefortii) is an invasive species common to the Mojave and Sonoran Deserts in the southwestern US. Our objective was to assess WorldView-2 (WV2) satellite imagery potential to detect Sahara mustard presence, cover, and biomass. We compared WV2 images (2.4 m and 30 m resolution) to Landsat ETM+ image both classified using a mixture tuned matched filtering (MTMF). A total of 1,885 field plots (30 × 30 m) were established across a 8,715 km<sup>2</sup> study area in spring of 2012, an exceptionally dry year. Average target canopy cover (7.5 percent) and biomass (0.82 g/m<sup>2</sup>) were extremely low. The WV2 MTMF classification had a much greater overall accuracy of 88 percent, while the resampled WV2 and the Landsat ETM+ MTMF classification overall accuracies were 67 percent and 59 percent, respectively. Producer’s and user’s accuracies in target detection were 86 percent and 94 percent, respectively, although the exceptionally low canopy cover and biomass were not well correlated with image-based estimates.


    Keywords Brassica tournefortii ; Landsat ; biomass ; canopy ; deserts ; invasive species ; remote sensing ; spring ; Southwestern United States
    Language English
    Dates of publication 2014-0901
    Size p. 885-893.
    Publishing place American Society for Photogrammetry and Remote Sensing
    Document type Article
    ISSN 0099-1112
    DOI 10.14358%2FPERS.80.9.885
    Database NAL-Catalogue (AGRICOLA)

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  3. Article ; Online: A Predictive Spatial Model to Quantify the Risk of Air-Travel-Associated Dengue Importation into the United States and Europe

    Lauren M. Gardner / David Fajardo / S. Travis Waller / Ophelia Wang / Sahotra Sarkar

    Journal of Tropical Medicine, Vol

    2012  Volume 2012

    Abstract: The number of travel-acquired dengue infections has been on a constant rise in the United States and Europe over the past decade. An increased volume of international passenger air traffic originating from regions with endemic dengue contributes to the ... ...

    Abstract The number of travel-acquired dengue infections has been on a constant rise in the United States and Europe over the past decade. An increased volume of international passenger air traffic originating from regions with endemic dengue contributes to the increasing number of dengue cases. This paper reports results from a network-based regression model which uses international passenger travel volumes, travel distances, predictive species distribution models (for the vector species), and infection data to quantify the relative risk of importing travel-acquired dengue infections into the US and Europe from dengue-endemic regions. Given the necessary data, this model can be used to identify optimal locations (origin cities, destination airports, etc.) for dengue surveillance. The model can be extended to other geographical regions and vector-borne diseases, as well as other network-based processes.
    Keywords Arctic medicine. Tropical medicine ; RC955-962
    Subject code 910
    Language English
    Publishing date 2012-01-01T00:00:00Z
    Publisher Hindawi Limited
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  4. Article: Drug Policy as Conservation Policy: Narco-Deforestation

    McSweeney, Kendra / David J. Wrathall / Erik A. Nielsen / Matthew J. Taylor / Ophelia Wang / Spencer T. Plumb / Zoe Pearson

    Science. 2014 Jan. 31, v. 343, no. 6170

    2014  

    Abstract: The watershed 2013 report, The Drug Problem in the Americas (1), highlights a shift toward multilateral support for hemispheric drug policy reform. This report by the Organization of American States (OAS) reviews failures of the U.S.-led prohibitionist †...

    Abstract The watershed 2013 report, The Drug Problem in the Americas (1), highlights a shift toward multilateral support for hemispheric drug policy reform. This report by the Organization of American States (OAS) reviews failures of the U.S.-led prohibitionist “war on drugs” and urges states to reconsider orthodox “supply-side” strategies (including interdiction and drug crop eradication), and to focus more on demand-side policy experimentation. In Central America, a key zone of drug transit that is being ripped apart by narco-fueled violence and corruption (2 , 3), the push for reform signals hope that the conditions fueling drug traffickers' profits and corrosive political influence may eventually be dismantled (4).
    Keywords drugs ; issues and policy ; politics ; profits and margins ; violence ; watersheds ; Central America ; North America ; South America
    Language English
    Dates of publication 2014-0131
    Size p. 489-490.
    Publishing place American Association for the Advancement of Science
    Document type Article
    ZDB-ID 128410-1
    ISSN 1095-9203 ; 0036-8075
    ISSN (online) 1095-9203
    ISSN 0036-8075
    DOI 10.1126/science.1244082
    Database NAL-Catalogue (AGRICOLA)

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  5. Article ; Online: Climate change and risk of leishmaniasis in north america

    Camila González / Ophelia Wang / Stavana E Strutz / Constantino González-Salazar / Víctor Sánchez-Cordero / Sahotra Sarkar

    PLoS Neglected Tropical Diseases, Vol 4, Iss 1, p e

    predictions from ecological niche models of vector and reservoir species.

    2010  Volume 585

    Abstract: BACKGROUND: Climate change is increasingly being implicated in species' range shifts throughout the world, including those of important vector and reservoir species for infectious diseases. In North America (México, United States, and Canada), ... ...

    Abstract BACKGROUND: Climate change is increasingly being implicated in species' range shifts throughout the world, including those of important vector and reservoir species for infectious diseases. In North America (México, United States, and Canada), leishmaniasis is a vector-borne disease that is autochthonous in México and Texas and has begun to expand its range northward. Further expansion to the north may be facilitated by climate change as more habitat becomes suitable for vector and reservoir species for leishmaniasis. METHODS AND FINDINGS: The analysis began with the construction of ecological niche models using a maximum entropy algorithm for the distribution of two sand fly vector species (Lutzomyia anthophora and L. diabolica), three confirmed rodent reservoir species (Neotoma albigula, N. floridana, and N. micropus), and one potential rodent reservoir species (N. mexicana) for leishmaniasis in northern México and the United States. As input, these models used species' occurrence records with topographic and climatic parameters as explanatory variables. Models were tested for their ability to predict correctly both a specified fraction of occurrence points set aside for this purpose and occurrence points from an independently derived data set. These models were refined to obtain predicted species' geographical distributions under increasingly strict assumptions about the ability of a species to disperse to suitable habitat and to persist in it, as modulated by its ecological suitability. Models successful at predictions were fitted to the extreme A2 and relatively conservative B2 projected climate scenarios for 2020, 2050, and 2080 using publicly available interpolated climate data from the Third Intergovernmental Panel on Climate Change Assessment Report. Further analyses included estimation of the projected human population that could potentially be exposed to leishmaniasis in 2020, 2050, and 2080 under the A2 and B2 scenarios. All confirmed vector and reservoir species will see an expansion of their ...
    Keywords Arctic medicine. Tropical medicine ; RC955-962 ; Public aspects of medicine ; RA1-1270
    Subject code 333
    Language English
    Publishing date 2010-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article ; Online: Are all species necessary to reveal ecologically important patterns?

    Edwin Pos / Juan Ernesto Guevara Andino / Daniel Sabatier / Jean‐François Molino / Nigel Pitman / Hugo Mogollón / David Neill / Carlos Cerón / Gonzalo Rivas / Anthony Di Fiore / Raquel Thomas / Milton Tirado / Kenneth R. Young / Ophelia Wang / Rodrigo Sierra / Roosevelt García‐Villacorta / Roderick Zagt / Walter Palacios / Milton Aulestia /
    Hans ter Steege

    Ecology and Evolution, Vol 4, Iss 24, Pp 4626-

    2014  Volume 4636

    Abstract: Abstract While studying ecological patterns at large scales, ecologists are often unable to identify all collections, forcing them to either omit these unidentified records entirely, without knowing the effect of this, or pursue very costly and time‐ ... ...

    Abstract Abstract While studying ecological patterns at large scales, ecologists are often unable to identify all collections, forcing them to either omit these unidentified records entirely, without knowing the effect of this, or pursue very costly and time‐consuming efforts for identifying them. These “indets” may be of critical importance, but as yet, their impact on the reliability of ecological analyses is poorly known. We investigated the consequence of omitting the unidentified records and provide an explanation for the results. We used three large‐scale independent datasets, (Guyana/ Suriname, French Guiana, Ecuador) each consisting of records having been identified to a valid species name (identified morpho‐species – IMS) and a number of unidentified records (unidentified morpho‐species – UMS). A subset was created for each dataset containing only the IMS, which was compared with the complete dataset containing all morpho‐species (AMS: = IMS + UMS) for the following analyses: species diversity (Fisher's alpha), similarity of species composition, Mantel test and ordination (NMDS). In addition, we also simulated an even larger number of unidentified records for all three datasets and analyzed the agreement between similarities again with these simulated datasets. For all analyses, results were extremely similar when using the complete datasets or the truncated subsets. IMS predicted ≥91% of the variation in AMS in all tests/analyses. Even when simulating a larger fraction of UMS, IMS predicted the results for AMS rather well. Using only IMS also out‐performed using higher taxon data (genus‐level identification) for similarity analyses. Finding a high congruence for all analyses when using IMS rather than AMS suggests that patterns of similarity and composition are very robust. In other words, having a large number of unidentified species in a dataset may not affect our conclusions as much as is often thought.
    Keywords Beta‐diversity ; Fisher's alpha ; indets ; large‐scale ecological patterns ; Mantel test ; morpho‐species ; Ecology ; QH540-549.5
    Subject code 590
    Language English
    Publishing date 2014-12-01T00:00:00Z
    Publisher Wiley
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article: Seasonal drought limits tree species across the Neotropics

    Esquivel‐Muelbert, Adriane / Abel Monteagudo Mendoza / Alejandro Araujo Murakami / Alfonso Alonso / Alfredo Fuentes / Alvaro Javier Duque Montoya / Angela Cano / Anthony Di Fiore / Armando Torres‐Lezama / Bonifacio Mostacedo / César I. A. Vela / Carlos Alberto Quesada / Carlos Reynel Rodriguez / Casimiro Mendoza / Charles Eugene Zartman / Corine Vriesendorp / David Neill / Douglas C. Daly / Emilio Vilanova Torre /
    Esteban Álvarez Dávila / Euridice N. Honorio Coronado / Fernando Cornejo / Francisco Dallmeier / Gabriela Lopez‐Gonzalez / Geertje van der Heijden / Georgia Pickavance / Hans ter Steege / Henrik Balslev / Hirma Ramírez‐Angulo / Hugo Mogollón / Isau Huamantupa‐Chuquimaco / James A. Comiskey / John Terborgh / Joost F. Duivenvoorden / Jorcely Barroso / Juan Carlos Montero / Juan Ernesto Guevara Andino / Juan Fernando Phillips / Juliana Stropp / Julie Peacock / Kenneth R. Young / Kyle G. Dexter / Ligia Estela Urrego / Luis Valenzuela Gamarra / Luzmila Arroyo / Manuel Ahuite / María Natalia Umaña / Marcos Ríos Paredes / Marcos Silveira / Marielos Peña‐Claros / Marisol Toledo / Miguel Alexiaides / Milton Aulestia / Milton Tirado / Nadir Carolina Pallqui Camacho / Nallarett Dávila / Nigel Pitman / Oliver L. Phillips / Ophelia Wang / Pablo Stevenson / Patricio von Hildebrand / Percy Núñez Vargas / Peter Møller Jørgensen / Rene Boot / Rodolfo Vasquez Martinez / Rodrigo Sierra / Roel Brienen / Roosevelt García‐Villacorta / Simon L. Lewis / Sonia Palacios / Ted R. Feldpausch / Terry Erwin / Therany Gonzales / Timothy J. Killeen / Timothy R. Baker / Todd Fredericksen / Victor Chama Moscoso / Vincent Vos / Walter Palacios Cuenca / William Nauray / Yadvinder Malhi / Zorayda Restrepo

    Ecography. 2017 May, v. 40, no. 5

    2017  

    Abstract: Within the tropics, the species richness of tree communities is strongly and positively associated with precipitation. Previous research has suggested that this macroecological pattern is driven by the negative effect of water‐stress on the ... ...

    Abstract Within the tropics, the species richness of tree communities is strongly and positively associated with precipitation. Previous research has suggested that this macroecological pattern is driven by the negative effect of water‐stress on the physiological processes of most tree species. This implies that the range limits of taxa are defined by their ability to occur under dry conditions, and thus in terms of species distributions predicts a nested pattern of taxa distribution from wet to dry areas. However, this ‘dry‐tolerance’ hypothesis has yet to be adequately tested at large spatial and taxonomic scales. Here, using a dataset of 531 inventory plots of closed canopy forest distributed across the western Neotropics we investigated how precipitation, evaluated both as mean annual precipitation and as the maximum climatological water deficit, influences the distribution of tropical tree species, genera and families. We find that the distributions of tree taxa are indeed nested along precipitation gradients in the western Neotropics. Taxa tolerant to seasonal drought are disproportionally widespread across the precipitation gradient, with most reaching even the wettest climates sampled; however, most taxa analysed are restricted to wet areas. Our results suggest that the ‘dry tolerance' hypothesis has broad applicability in the world's most species‐rich forests. In addition, the large number of species restricted to wetter conditions strongly indicates that an increased frequency of drought could severely threaten biodiversity in this region. Overall, this study establishes a baseline for exploring how tropical forest tree composition may change in response to current and future environmental changes in this region.
    Keywords atmospheric precipitation ; data collection ; drought ; forest trees ; inventories ; Neotropics ; species diversity ; tropical forests ; water stress
    Language English
    Dates of publication 2017-05
    Size p. 618-629.
    Publishing place Blackwell Publishing Ltd
    Document type Article
    Note JOURNAL ARTICLE
    ZDB-ID 1112659-0
    ISSN 0906-7590
    ISSN 0906-7590
    DOI 10.1111/ecog.01904
    Database NAL-Catalogue (AGRICOLA)

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  8. Article ; Online: Biased-corrected richness estimates for the Amazonian tree flora

    Hans ter Steege / Paulo I. Prado / Renato A. F. de Lima / Edwin Pos / Luiz de Souza Coelho / Diogenes de Andrade Lima Filho / Rafael P. Salomão / Iêda Leão Amaral / Francisca Dionízia de Almeida Matos / Carolina V. Castilho / Oliver L. Phillips / Juan Ernesto Guevara / Marcelo de Jesus Veiga Carim / Dairon Cárdenas López / William E. Magnusson / Florian Wittmann / Maria Pires Martins / Daniel Sabatier / Mariana Victória Irume /
    José Renan da Silva Guimarães / Jean-François Molino / Olaf S. Bánki / Maria Teresa Fernandez Piedade / Nigel C. A. Pitman / José Ferreira Ramos / Abel Monteagudo Mendoza / Eduardo Martins Venticinque / Bruno Garcia Luize / Percy Núñez Vargas / Thiago Sanna Freire Silva / Evlyn Márcia Moraes de Leão Novo / Neidiane Farias Costa Reis / John Terborgh / Angelo Gilberto Manzatto / Katia Regina Casula / Euridice N. Honorio Coronado / Juan Carlos Montero / Alvaro Duque / Flávia R. C. Costa / Nicolás Castaño Arboleda / Jochen Schöngart / Charles Eugene Zartman / Timothy J. Killeen / Beatriz S. Marimon / Ben Hur Marimon-Junior / Rodolfo Vasquez / Bonifacio Mostacedo / Layon O. Demarchi / Ted R. Feldpausch / Julien Engel / Pascal Petronelli / Chris Baraloto / Rafael L. Assis / Hernán Castellanos / Marcelo Fragomeni Simon / Marcelo Brilhante de Medeiros / Adriano Quaresma / Susan G. W. Laurance / Lorena M. Rincón / Ana Andrade / Thaiane R. Sousa / José Luís Camargo / Juliana Schietti / William F. Laurance / Helder Lima de Queiroz / Henrique Eduardo Mendonça Nascimento / Maria Aparecida Lopes / Emanuelle de Sousa Farias / José Leonardo Lima Magalhães / Roel Brienen / Gerardo A. Aymard C. / Juan David Cardenas Revilla / Ima Célia Guimarães Vieira / Bruno Barçante Ladvocat Cintra / Pablo R. Stevenson / Yuri Oliveira Feitosa / Joost F. Duivenvoorden / Hugo F. Mogollón / Alejandro Araujo-Murakami / Leandro Valle Ferreira / José Rafael Lozada / James A. Comiskey / José Julio de Toledo / Gabriel Damasco / Nállarett Dávila / Aline Lopes / Roosevelt García-Villacorta / Freddie Draper / Alberto Vicentini / Fernando Cornejo Valverde / Jon Lloyd / Vitor H. F. Gomes / David Neill / Alfonso Alonso / Francisco Dallmeier / Fernanda Coelho de Souza / Rogerio Gribel / Luzmila Arroyo / Fernanda Antunes Carvalho / Daniel Praia Portela de Aguiar / Dário Dantas do Amaral / Marcelo Petratti Pansonato / Kenneth J. Feeley / Erika Berenguer / Paul V. A. Fine / Marcelino Carneiro Guedes / Jos Barlow / Joice Ferreira / Boris Villa / Maria Cristina Peñuela Mora / Eliana M. Jimenez / Juan Carlos Licona / Carlos Cerón / Raquel Thomas / Paul Maas / Marcos Silveira / Terry W. Henkel / Juliana Stropp / Marcos Ríos Paredes / Kyle G. Dexter / Doug Daly / Tim R. Baker / Isau Huamantupa-Chuquimaco / William Milliken / Toby Pennington / J. Sebastián Tello / José Luis Marcelo Pena / Carlos A. Peres / Bente Klitgaard / Alfredo Fuentes / Miles R. Silman / Anthony Di Fiore / Patricio von Hildebrand / Jerome Chave / Tinde R. van Andel / Renato Richard Hilário / Juan Fernando Phillips / Gonzalo Rivas-Torres / Janaína Costa Noronha / Adriana Prieto / Therany Gonzales / Rainiellene de Sá Carpanedo / George Pepe Gallardo Gonzales / Ricardo Zárate Gómez / Domingos de Jesus Rodrigues / Egleé L. Zent / Ademir R. Ruschel / Vincent Antoine Vos / Émile Fonty / André Braga Junqueira / Hilda Paulette Dávila Doza / Bruce Hoffman / Stanford Zent / Edelcilio Marques Barbosa / Yadvinder Malhi / Luiz Carlos de Matos Bonates / Ires Paula de Andrade Miranda / Natalino Silva / Flávia Rodrigues Barbosa / César I. A. Vela / Linder Felipe Mozombite Pinto / Agustín Rudas / Bianca Weiss Albuquerque / Maria Natalia Umaña / Yrma Andreina Carrero Márquez / Geertje van der Heijden / Kenneth R. Young / Milton Tirado / Diego F. Correa / Rodrigo Sierra / Janaina Barbosa Pedrosa Costa / Maira Rocha / Emilio Vilanova Torre / Ophelia Wang / Alexandre A. Oliveira / Michelle Kalamandeen / Corine Vriesendorp / Hirma Ramirez-Angulo / Milena Holmgren / Marcelo Trindade Nascimento / David Galbraith / Bernardo Monteiro Flores / Veridiana Vizoni Scudeller / Angela Cano / Manuel Augusto Ahuite Reategui / Italo Mesones / Cláudia Baider / Casimiro Mendoza / Roderick Zagt / Ligia Estela Urrego Giraldo / Cid Ferreira / Daniel Villarroel / Reynaldo Linares-Palomino / William Farfan-Rios / Luisa Fernanda Casas / Sasha Cárdenas / Henrik Balslev / Armando Torres-Lezama / Miguel N. Alexiades / Karina Garcia-Cabrera / Luis Valenzuela Gamarra / Elvis H. Valderrama Sandoval / Freddy Ramirez Arevalo / Lionel Hernandez / Adeilza Felipe Sampaio / Susamar Pansini / Walter Palacios Cuenca / Edmar Almeida de Oliveira / Daniela Pauletto / Aurora Levesley / Karina Melgaço / Georgia Pickavance

    Scientific Reports, Vol 10, Iss 1, Pp 1-

    2020  Volume 13

    Abstract: Abstract Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended ... ...

    Abstract Abstract Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended database of forest plots with up-to-date taxonomy. We show that the species abundance distribution of Amazonia is best approximated by a logseries with aggregated individuals, where aggregation increases with rarity. By averaging several methods to estimate total richness, we confirm that over 15,000 tree species are expected to occur in Amazonia. We also show that using ten times the number of plots would result in an increase to just ~50% of those 15,000 estimated species. To get a more complete sample of all tree species, rigorous field campaigns may be needed but the number of trees in Amazonia will remain an estimate for years to come.
    Keywords Medicine ; R ; Science ; Q
    Language English
    Publishing date 2020-06-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article ; Online: Rarity of monodominance in hyperdiverse Amazonian forests

    Hans ter Steege / Terry W. Henkel / Nora Helal / Beatriz S. Marimon / Ben Hur Marimon-Junior / Andreas Huth / Jürgen Groeneveld / Daniel Sabatier / Luiz de Souza Coelho / Diogenes de Andrade Lima Filho / Rafael P. Salomão / Iêda Leão Amaral / Francisca Dionízia de Almeida Matos / Carolina V. Castilho / Oliver L. Phillips / Juan Ernesto Guevara / Marcelo de Jesus Veiga Carim / Dairon Cárdenas López / William E. Magnusson /
    Florian Wittmann / Mariana Victória Irume / Maria Pires Martins / José Renan da Silva Guimarães / Jean-François Molino / Olaf S. Bánki / Maria Teresa Fernandez Piedade / Nigel C. A. Pitman / Abel Monteagudo Mendoza / José Ferreira Ramos / Bruno Garcia Luize / Evlyn Márcia Moraes de Leão Novo / Percy Núñez Vargas / Thiago Sanna Freire Silva / Eduardo Martins Venticinque / Angelo Gilberto Manzatto / Neidiane Farias Costa Reis / John Terborgh / Katia Regina Casula / Euridice N. Honorio Coronado / Juan Carlos Montero / Ted R. Feldpausch / Alvaro Duque / Flávia R. C. Costa / Nicolás Castaño Arboleda / Jochen Schöngart / Timothy J. Killeen / Rodolfo Vasquez / Bonifacio Mostacedo / Layon O. Demarchi / Rafael L. Assis / Chris Baraloto / Julien Engel / Pascal Petronelli / Hernán Castellanos / Marcelo Brilhante de Medeiros / Adriano Quaresma / Marcelo Fragomeni Simon / Ana Andrade / José Luís Camargo / Susan G. W. Laurance / William F. Laurance / Lorena M. Rincón / Juliana Schietti / Thaiane R. Sousa / Emanuelle de Sousa Farias / Maria Aparecida Lopes / José Leonardo Lima Magalhães / Henrique Eduardo Mendonça Nascimento / Helder Lima de Queiroz / Gerardo A. Aymard C. / Roel Brienen / Juan David Cardenas Revilla / Ima Célia Guimarães Vieira / Bruno Barçante Ladvocat Cintra / Pablo R. Stevenson / Yuri Oliveira Feitosa / Joost F. Duivenvoorden / Hugo F. Mogollón / Alejandro Araujo-Murakami / Leandro Valle Ferreira / José Rafael Lozada / James A. Comiskey / José Julio de Toledo / Gabriel Damasco / Nállarett Dávila / Freddie Draper / Roosevelt García-Villacorta / Aline Lopes / Alberto Vicentini / Alfonso Alonso / Francisco Dallmeier / Vitor H. F. Gomes / Jon Lloyd / David Neill / Daniel Praia Portela de Aguiar / Luzmila Arroyo / Fernanda Antunes Carvalho / Fernanda Coelho de Souza / Dário Dantas do Amaral / Kenneth J. Feeley / Rogerio Gribel / Marcelo Petratti Pansonato / Jos Barlow / Erika Berenguer / Joice Ferreira / Paul V. A. Fine / Marcelino Carneiro Guedes / Eliana M. Jimenez / Juan Carlos Licona / Maria Cristina Peñuela Mora / Boris Villa / Carlos Cerón / Paul Maas / Marcos Silveira / Juliana Stropp / Raquel Thomas / Tim R. Baker / Doug Daly / Kyle G. Dexter / Isau Huamantupa-Chuquimaco / William Milliken / Toby Pennington / Marcos Ríos Paredes / Alfredo Fuentes / Bente Klitgaard / José Luis Marcelo Pena / Carlos A. Peres / Miles R. Silman / J. Sebastián Tello / Jerome Chave / Fernando Cornejo Valverde / Anthony Di Fiore / Renato Richard Hilário / Juan Fernando Phillips / Gonzalo Rivas-Torres / Tinde R. van Andel / Patricio von Hildebrand / Janaína Costa Noronha / Edelcilio Marques Barbosa / Flávia Rodrigues Barbosa / Luiz Carlos de Matos Bonates / Rainiellen de Sá Carpanedo / Hilda Paulette Dávila Doza / Émile Fonty / Ricardo GómeZárate z / Therany Gonzales / George Pepe Gallardo Gonzales / Bruce Hoffman / André Braga Junqueira / Yadvinder Malhi / Ires Paula de Andrade Miranda / Linder Felipe Mozombite Pinto / Adriana Prieto / Domingos de Jesus Rodrigues / Agustín Rudas / Ademir R. Ruschel / Natalino Silva / César I. A. Vela / Vincent Antoine Vos / Egleé L. Zent / Stanford Zent / Bianca Weiss Albuquerque / Angela Cano / Yrma Andreina Carrero Márquez / Diego F. Correa / Janaina Barbosa Pedrosa Costa / Bernardo Monteiro Flores / David Galbraith / Milena Holmgren / Michelle Kalamandeen / Marcelo Trindade Nascimento / Alexandre A. Oliveira / Hirma Ramirez-Angulo / Maira Rocha / Veridiana Vizoni Scudeller / Rodrigo Sierra / Milton Tirado / Maria Natalia Umaña Medina / Geertje van der Heijden / Emilio Vilanova Torre / Corine Vriesendorp / Ophelia Wang / Kenneth R. Young / Manuel Augusto Ahuite Reategui / Cláudia Baider / Henrik Balslev / Sasha Cárdenas / Luisa Fernanda Casas / William Farfan-Rios / Cid Ferreira / Reynaldo Linares-Palomino / Casimiro Mendoza / Italo Mesones / Armando Torres-Lezama / Ligia Estela Urrego Giraldo / Daniel Villarroel / Roderick Zagt / Miguel N. Alexiades / Edmar Almeida de Oliveira / Karina Garcia-Cabrera / Lionel Hernandez / Walter Palacios Cuenca / Susamar Pansini / Daniela Pauletto / Freddy Ramirez Arevalo / Adeilza Felipe Sampaio / Elvis H. Valderrama Sandoval / Luis Valenzuela Gamarra / Aurora Levesley / Georgia Pickavance / Karina Melgaço

    Scientific Reports, Vol 9, Iss 1, Pp 1-

    2019  Volume 15

    Abstract: Abstract Tropical forests are known for their high diversity. Yet, forest patches do occur in the tropics where a single tree species is dominant. Such “monodominant” forests are known from all of the main tropical regions. For Amazonia, we sampled the ... ...

    Abstract Abstract Tropical forests are known for their high diversity. Yet, forest patches do occur in the tropics where a single tree species is dominant. Such “monodominant” forests are known from all of the main tropical regions. For Amazonia, we sampled the occurrence of monodominance in a massive, basin-wide database of forest-inventory plots from the Amazon Tree Diversity Network (ATDN). Utilizing a simple defining metric of at least half of the trees ≥ 10 cm diameter belonging to one species, we found only a few occurrences of monodominance in Amazonia, and the phenomenon was not significantly linked to previously hypothesized life history traits such wood density, seed mass, ectomycorrhizal associations, or Rhizobium nodulation. In our analysis, coppicing (the formation of sprouts at the base of the tree or on roots) was the only trait significantly linked to monodominance. While at specific locales coppicing or ectomycorrhizal associations may confer a considerable advantage to a tree species and lead to its monodominance, very few species have these traits. Mining of the ATDN dataset suggests that monodominance is quite rare in Amazonia, and may be linked primarily to edaphic factors.
    Keywords Medicine ; R ; Science ; Q
    Subject code 580
    Language English
    Publishing date 2019-09-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article ; Online: Species Distribution Modelling

    Vitor H. F. Gomes / Stéphanie D. IJff / Niels Raes / Iêda Leão Amaral / Rafael P. Salomão / Luiz de Souza Coelho / Francisca Dionízia de Almeida Matos / Carolina V. Castilho / Diogenes de Andrade Lima Filho / Dairon Cárdenas López / Juan Ernesto Guevara / William E. Magnusson / Oliver L. Phillips / Florian Wittmann / Marcelo de Jesus Veiga Carim / Maria Pires Martins / Mariana Victória Irume / Daniel Sabatier / Jean-François Molino /
    Olaf S. Bánki / José Renan da Silva Guimarães / Nigel C. A. Pitman / Maria Teresa Fernandez Piedade / Abel Monteagudo Mendoza / Bruno Garcia Luize / Eduardo Martins Venticinque / Evlyn Márcia Moraes de Leão Novo / Percy Núñez Vargas / Thiago Sanna Freire Silva / Angelo Gilberto Manzatto / John Terborgh / Neidiane Farias Costa Reis / Juan Carlos Montero / Katia Regina Casula / Beatriz S. Marimon / Ben-Hur Marimon / Euridice N. Honorio Coronado / Ted R. Feldpausch / Alvaro Duque / Charles Eugene Zartman / Nicolás Castaño Arboleda / Timothy J. Killeen / Bonifacio Mostacedo / Rodolfo Vasquez / Jochen Schöngart / Rafael L. Assis / Marcelo Brilhante Medeiros / Marcelo Fragomeni Simon / Ana Andrade / William F. Laurance / José Luís Camargo / Layon O. Demarchi / Susan G. W. Laurance / Emanuelle de Sousa Farias / Henrique Eduardo Mendonça Nascimento / Juan David Cardenas Revilla / Adriano Quaresma / Flavia R. C. Costa / Ima Célia Guimarães Vieira / Bruno Barçante Ladvocat Cintra / Hernán Castellanos / Roel Brienen / Pablo R. Stevenson / Yuri Feitosa / Joost F. Duivenvoorden / Gerardo A. Aymard C. / Hugo F. Mogollón / Natalia Targhetta / James A. Comiskey / Alberto Vicentini / Aline Lopes / Gabriel Damasco / Nállarett Dávila / Roosevelt García-Villacorta / Carolina Levis / Juliana Schietti / Priscila Souza / Thaise Emilio / Alfonso Alonso / David Neill / Francisco Dallmeier / Leandro Valle Ferreira / Alejandro Araujo-Murakami / Daniel Praia / Dário Dantas do Amaral / Fernanda Antunes Carvalho / Fernanda Coelho de Souza / Kenneth Feeley / Luzmila Arroyo / Marcelo Petratti Pansonato / Rogerio Gribel / Boris Villa / Juan Carlos Licona / Paul V. A. Fine / Carlos Cerón / Chris Baraloto / Eliana M. Jimenez / Juliana Stropp / Julien Engel / Marcos Silveira / Maria Cristina Peñuela Mora / Pascal Petronelli / Paul Maas / Raquel Thomas-Caesar / Terry W. Henkel / Doug Daly / Marcos Ríos Paredes / Tim R. Baker / Alfredo Fuentes / Carlos A. Peres / Jerome Chave / Jose Luis Marcelo Pena / Kyle G. Dexter / Miles R. Silman / Peter Møller Jørgensen / Toby Pennington / Anthony Di Fiore / Fernando Cornejo Valverde / Juan Fernando Phillips / Gonzalo Rivas-Torres / Patricio von Hildebrand / Tinde R. van Andel / Ademir R. Ruschel / Adriana Prieto / Agustín Rudas / Bruce Hoffman / César I. A. Vela / Edelcilio Marques Barbosa / Egleé L. Zent / George Pepe Gallardo Gonzales / Hilda Paulette Dávila Doza / Ires Paula de Andrade Miranda / Jean-Louis Guillaumet / Linder Felipe Mozombite Pinto / Luiz Carlos de Matos Bonates / Natalino Silva / Ricardo Zárate Gómez / Stanford Zent / Therany Gonzales / Vincent A. Vos / Yadvinder Malhi / Alexandre A. Oliveira / Angela Cano / Bianca Weiss Albuquerque / Corine Vriesendorp / Diego Felipe Correa / Emilio Vilanova Torre / Geertje van der Heijden / Hirma Ramirez-Angulo / José Ferreira Ramos / Kenneth R. Young / Maira Rocha / Marcelo Trindade Nascimento / Maria Natalia Umaña Medina / Milton Tirado / Ophelia Wang / Rodrigo Sierra / Armando Torres-Lezama / Casimiro Mendoza / Cid Ferreira / Cláudia Baider / Daniel Villarroel / Henrik Balslev / Italo Mesones / Ligia Estela Urrego Giraldo / Luisa Fernanda Casas / Manuel Augusto Ahuite Reategui / Reynaldo Linares-Palomino / Roderick Zagt / Sasha Cárdenas / William Farfan-Rios / Adeilza Felipe Sampaio / Daniela Pauletto / Elvis H. Valderrama Sandoval / Freddy Ramirez Arevalo / Isau Huamantupa-Chuquimaco / Karina Garcia-Cabrera / Lionel Hernandez / Luis Valenzuela Gamarra / Miguel N. Alexiades / Susamar Pansini / Walter Palacios Cuenca / William Milliken / Joana Ricardo / Gabriela Lopez-Gonzalez / Edwin Pos / Hans ter Steege

    Scientific Reports, Vol 8, Iss 1, Pp 1-

    Contrasting presence-only models with plot abundance data

    2018  Volume 12

    Abstract: Abstract Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often ... ...

    Abstract Abstract Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often spatially biased which may generate inaccuracies in SDMs. Here, we test how the distribution of NHCs and MaxEnt predictions relates to a spatial abundance model, based on a large plot dataset for Amazonian tree species, using inverse distance weighting (IDW). We also propose a new pipeline to deal with inconsistencies in NHCs and to limit the area of occupancy of the species. We found a significant but weak positive relationship between the distribution of NHCs and IDW for 66% of the species. The relationship between SDMs and IDW was also significant but weakly positive for 95% of the species, and sensitivity for both analyses was high. Furthermore, the pipeline removed half of the NHCs records. Presence-only SDM applications should consider this limitation, especially for large biodiversity assessments projects, when they are automatically generated without subsequent checking. Our pipeline provides a conservative estimate of a species’ area of occupancy, within an area slightly larger than its extent of occurrence, compatible to e.g. IUCN red list assessments.
    Keywords Medicine ; R ; Science ; Q
    Subject code 590
    Language English
    Publishing date 2018-01-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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