LIVIVO - The Search Portal for Life Sciences

zur deutschen Oberfläche wechseln
Advanced search

Search results

Result 1 - 9 of total 9

Search options

  1. Article ; Online: The hyperdominant tropical tree Eschweilera coriacea (Lecythidaceae) shows higher genetic heterogeneity than sympatric Eschweilera species in French Guiana

    Myriam Heuertz / Henri Caron / Caroline Scotti-Saintagne / Pascal Pétronelli / Julien Engel / Niklas Tysklind / Sana Miloudi / Fernanda Gaiotto / Jérôme Chave / Jean-François Molino / Daniel Sabatier / João Loureiro / Katharina Budde

    Plant Ecology and Evolution, Vol 153, Iss 1, Pp 67-

    2020  Volume 81

    Abstract: Background and aims – The evolutionary history of Amazonia’s hyperabundant tropical tree species, also known as “hyperdominant” species, remains poorly investigated. We assessed whether the hyperdominant Eschweilera coriacea (DC.) S.A.Mori (Lecythidaceae) ...

    Abstract Background and aims – The evolutionary history of Amazonia’s hyperabundant tropical tree species, also known as “hyperdominant” species, remains poorly investigated. We assessed whether the hyperdominant Eschweilera coriacea (DC.) S.A.Mori (Lecythidaceae) represents a single genetically cohesive species, and how its genetic constitution relates to other species from the same clade with which it occurs sympatrically in French Guiana.Methods – We sampled 152 individuals in nine forest sites in French Guiana, representing 11 species of the genus Eschweilera all belonging to the Parvifolia clade, with emphasis on E. coriacea. Samples were genotyped at four simple sequence repeat (SSR) markers. We delimited gene pools, i.e., genetically coherent putative taxa, using STRUCTURE software and principal component analysis. We compared the genetic assignment of individuals with their morphological species determination and estimated genetic diversity and differentiation for gene pools and species. We also estimated genome size using flow cytometry.Key results – SSR profiles commonly displayed up to four alleles per genotype, suggesting that the investigated Eschweilera species bear a paleopolyploid signature. Flow cytometry suggested that the studied species are diploid with haploid genome sizes of 871–1046 Mbp. We detected five gene pools and observed a good correspondence between morphological and genetic delimitation for Eschweilera sagotiana Miers and the undescribed morphospecies E. sp. 3 (which resembles E. grandiflora (Aubl.) Sandwith), and to a lesser extent for E. decolorans Sandwith and E. micrantha (O.Berg) Miers. Eschweilera coriacea was the most genetically diverse species and included individuals assigned to each gene pool. Conclusions – We found no conclusive evidence for cryptic species within E. coriacea in French Guiana. SSRs detected fewer gene pools than expected based on morphology in the Parvifolia clade but discriminated evolutionary relationships better than available plastid markers. A positive ...
    Keywords Eschweilera ; microsatellites ; species delimitation ; Plant ecology ; QK900-989
    Subject code 590 ; 580
    Language English
    Publishing date 2020-03-01T00:00:00Z
    Publisher Meise Botanic Garden
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  2. Article ; Online: Coordinated community structure among trees, fungi and invertebrate groups in Amazonian rainforests

    Jason Vleminckx / Heidy Schimann / Thibaud Decaëns / Mélanie Fichaux / Vincent Vedel / Gaëlle Jaouen / Mélanie Roy / Emmanuel Lapied / Julien Engel / Aurélie Dourdain / Pascal Petronelli / Jérôme Orivel / Christopher Baraloto

    Scientific Reports, Vol 9, Iss 1, Pp 1-

    2019  Volume 10

    Abstract: Abstract Little is known regarding how trophic interactions shape community assembly in tropical forests. Here we assess multi-taxonomic community assembly rules using a rare standardized coordinated inventory comprising exhaustive surveys of five highly- ...

    Abstract Abstract Little is known regarding how trophic interactions shape community assembly in tropical forests. Here we assess multi-taxonomic community assembly rules using a rare standardized coordinated inventory comprising exhaustive surveys of five highly-diverse taxonomic groups exerting key ecological functions: trees, fungi, earthworms, ants and spiders. We sampled 36 1.9-ha plots from four remote locations in French Guiana including precise soil measurements, and we tested whether species turnover was coordinated among groups across geographic and edaphic gradients. All species group pairs exhibited significant compositional associations that were independent from soil conditions. For some of the pairs, associations were also partly explained by soil properties, especially soil phosphorus availability. Our study provides evidence for coordinated turnover among taxonomic groups beyond simple relationships with environmental factors, thereby refining our understanding regarding the nature of interactions occurring among these ecologically important groups.
    Keywords Medicine ; R ; Science ; Q
    Language English
    Publishing date 2019-08-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  3. Article ; Online: Pervasive Local-Scale Tree-Soil Habitat Association in a Tropical Forest Community.

    Elodie Allié / Raphaël Pélissier / Julien Engel / Pascal Petronelli / Vincent Freycon / Vincent Deblauwe / Laure Soucémarianadin / Jean Weigel / Christopher Baraloto

    PLoS ONE, Vol 10, Iss 11, p e

    2015  Volume 0141488

    Abstract: We examined tree-soil habitat associations in lowland forest communities at Paracou, French Guiana. We analyzed a large dataset assembling six permanent plots totaling 37.5 ha, in which extensive LIDAR-derived topographical data and soil chemical and ... ...

    Abstract We examined tree-soil habitat associations in lowland forest communities at Paracou, French Guiana. We analyzed a large dataset assembling six permanent plots totaling 37.5 ha, in which extensive LIDAR-derived topographical data and soil chemical and physical data have been integrated with precise botanical determinations. Map of relative elevation from the nearest stream summarized both soil fertility and hydromorphic characteristics, with seasonally inundated bottomlands having higher soil phosphate content and base saturation, and plateaus having higher soil carbon, nitrogen and aluminum contents. We employed a statistical test of correlations between tree species density and environmental maps, by generating Monte Carlo simulations of random raster images that preserve autocorrelation of the original maps. Nearly three fourths of the 94 taxa with at least one stem per ha showed a significant correlation between tree density and relative elevation, revealing contrasted species-habitat associations in term of abundance, with seasonally inundated bottomlands (24.5% of species) and well-drained plateaus (48.9% of species). We also observed species preferences for environments with or without steep slopes (13.8% and 10.6%, respectively). We observed that closely-related species were frequently associated with different soil habitats in this region (70% of the 14 genera with congeneric species that have a significant association test) suggesting species-habitat associations have arisen multiple times in this tree community. We also tested if species with similar habitat preferences shared functional strategies. We found that seasonally inundated forest specialists tended to have smaller stature (maximum diameter) than species found on plateaus. Our results underline the importance of tree-soil habitat associations in structuring diverse communities at fine spatial scales and suggest that additional studies are needed to disentangle community assembly mechanisms related to dispersal limitation, biotic interactions ...
    Keywords Medicine ; R ; Science ; Q
    Language English
    Publishing date 2015-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  4. Article ; Online: Identification of Amazonian trees with DNA barcodes.

    Mailyn Adriana Gonzalez / Christopher Baraloto / Julien Engel / Scott A Mori / Pascal Pétronelli / Bernard Riéra / Aurélien Roger / Christophe Thébaud / Jérôme Chave

    PLoS ONE, Vol 4, Iss 10, p e

    2009  Volume 7483

    Abstract: BACKGROUND:Large-scale plant diversity inventories are critical to develop informed conservation strategies. However, the workload required for classic taxonomic surveys remains high and is particularly problematic for megadiverse tropical forests. ... ...

    Abstract BACKGROUND:Large-scale plant diversity inventories are critical to develop informed conservation strategies. However, the workload required for classic taxonomic surveys remains high and is particularly problematic for megadiverse tropical forests. METHODOLOGY/PRINCIPAL FINDINGS:Based on a comprehensive census of all trees in two hectares of a tropical forest in French Guiana, we examined whether plant DNA barcoding could contribute to increasing the quality and the pace of tropical plant biodiversity surveys. Of the eight plant DNA markers we tested (rbcLa, rpoC1, rpoB, matK, ycf5, trnL, psbA-trnH, ITS), matK and ITS had a low rate of sequencing success. More critically, none of the plastid markers achieved a rate of correct plant identification greater than 70%, either alone or combined. The performance of all barcoding markers was noticeably low in few species-rich clades, such as the Laureae, and the Sapotaceae. A field test of the approach enabled us to detect 130 molecular operational taxonomic units in a sample of 252 juvenile trees. Including molecular markers increased the identification rate of juveniles from 72% (morphology alone) to 96% (morphology and molecular) of the individuals assigned to a known tree taxon. CONCLUSION/SIGNIFICANCE:We conclude that while DNA barcoding is an invaluable tool for detecting errors in identifications and for identifying plants at juvenile stages, its limited ability to identify collections will constrain the practical implementation of DNA-based tropical plant biodiversity programs.
    Keywords Medicine ; R ; Science ; Q
    Subject code 580
    Language English
    Publishing date 2009-10-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  5. Article ; Online: Mapping density, diversity and species-richness of the Amazon tree flora

    Hans ter Steege / Nigel C. A. Pitman / Iêda Leão do Amaral / Luiz de Souza Coelho / Francisca Dionízia de Almeida Matos / Diógenes de Andrade Lima Filho / Rafael P. Salomão / Florian Wittmann / Carolina V. Castilho / Juan Ernesto Guevara / Marcelo de Jesus Veiga Carim / Oliver L. Phillips / William E. Magnusson / Daniel Sabatier / Juan David Cardenas Revilla / Jean-François Molino / Mariana Victória Irume / Maria Pires Martins / José Renan da Silva Guimarães /
    José Ferreira Ramos / Olaf S. Bánki / Maria Teresa Fernandez Piedade / Dairon Cárdenas López / Domingos de Jesus Rodrigues / Layon O. Demarchi / Jochen Schöngart / Everton José Almeida / Luciane Ferreira Barbosa / Larissa Cavalheiro / Márcia Cléia Vilela dos Santos / Bruno Garcia Luize / Evlyn Márcia Moraes de Leão Novo / Percy Núñez Vargas / Thiago Sanna Freire Silva / Eduardo Martins Venticinque / Angelo Gilberto Manzatto / Neidiane Farias Costa Reis / John Terborgh / Katia Regina Casula / Euridice N. Honorio Coronado / Abel Monteagudo Mendoza / Juan Carlos Montero / Flávia R. C. Costa / Ted R. Feldpausch / Adriano Costa Quaresma / Nicolás Castaño Arboleda / Charles Eugene Zartman / Timothy J. Killeen / Beatriz S. Marimon / Ben Hur Marimon-Junior / Rodolfo Vasquez / Bonifacio Mostacedo / Rafael L. Assis / Chris Baraloto / Dário Dantas do Amaral / Julien Engel / Pascal Petronelli / Hernán Castellanos / Marcelo Brilhante de Medeiros / Marcelo Fragomeni Simon / Ana Andrade / José Luís Camargo / William F. Laurance / Susan G. W. Laurance / Lorena Maniguaje Rincón / Juliana Schietti / Thaiane R. Sousa / Emanuelle de Sousa Farias / Maria Aparecida Lopes / José Leonardo Lima Magalhães / Henrique Eduardo Mendonça Nascimento / Helder Lima de Queiroz / Gerardo A. Aymard C. / Roel Brienen / Pablo R. Stevenson / Alejandro Araujo-Murakami / Tim R. Baker / Bruno Barçante Ladvocat Cintra / Yuri Oliveira Feitosa / Hugo F. Mogollón / Joost F. Duivenvoorden / Carlos A. Peres / Miles R. Silman / Leandro Valle Ferreira / José Rafael Lozada / James A. Comiskey / Freddie C. Draper / José Julio de Toledo / Gabriel Damasco / Roosevelt García-Villacorta / Aline Lopes / Alberto Vicentini / Fernando Cornejo Valverde / Alfonso Alonso / Luzmila Arroyo / Francisco Dallmeier / Vitor H. F. Gomes / Eliana M. Jimenez / David Neill / Maria Cristina Peñuela Mora / Janaína Costa Noronha / Daniel P. P. de Aguiar / Flávia Rodrigues Barbosa / Yennie K. Bredin / Rainiellen de Sá Carpanedo / Fernanda Antunes Carvalho / Fernanda Coelho de Souza / Kenneth J. Feeley / Rogerio Gribel / Torbjørn Haugaasen / Joseph E. Hawes / Marcelo Petratti Pansonato / Marcos Ríos Paredes / Jos Barlow / Erika Berenguer / Izaias Brasil da Silva / Maria Julia Ferreira / Joice Ferreira / Paul V. A. Fine / Marcelino Carneiro Guedes / Carolina Levis / Juan Carlos Licona / Boris Eduardo Villa Zegarra / Vincent Antoine Vos / Carlos Cerón / Flávia Machado Durgante / Émile Fonty / Terry W. Henkel / John Ethan Householder / Isau Huamantupa-Chuquimaco / Edwin Pos / Marcos Silveira / Juliana Stropp / Raquel Thomas / Doug Daly / Kyle G. Dexter / William Milliken / Guido Pardo Molina / Toby Pennington / Ima Célia Guimarães Vieira / Bianca Weiss Albuquerque / Wegliane Campelo / Alfredo Fuentes / Bente Klitgaard / José Luis Marcelo Pena / J. Sebastián Tello / Corine Vriesendorp / Jerome Chave / Anthony Di Fiore / Renato Richard Hilário / Luciana de Oliveira Pereira / Juan Fernando Phillips / Gonzalo Rivas-Torres / Tinde R. van Andel / Patricio von Hildebrand / William Balee / Edelcilio Marques Barbosa / Luiz Carlos de Matos Bonates / Hilda Paulette Dávila Doza / Ricardo Zárate Gómez / Therany Gonzales / George Pepe Gallardo Gonzales / Bruce Hoffman / André Braga Junqueira / Yadvinder Malhi / Ires Paula de Andrade Miranda / Linder Felipe Mozombite Pinto / Adriana Prieto / Agustín Rudas / Ademir R. Ruschel / Natalino Silva / César I. A. Vela / Egleé L. Zent / Stanford Zent / Angela Cano / Yrma Andreina Carrero Márquez / Diego F. Correa / Janaina Barbosa Pedrosa Costa / Bernardo Monteiro Flores / David Galbraith / Milena Holmgren / Michelle Kalamandeen / Guilherme Lobo / Luis Torres Montenegro / Marcelo Trindade Nascimento / Alexandre A. Oliveira / Maihyra Marina Pombo / Hirma Ramirez-Angulo / Maira Rocha / Veridiana Vizoni Scudeller / Rodrigo Sierra / Milton Tirado / Maria Natalia Umaña / Geertje van der Heijden / Emilio Vilanova Torre / Manuel Augusto Ahuite Reategui / Cláudia Baider / Henrik Balslev / Sasha Cárdenas / Luisa Fernanda Casas / María José Endara / William Farfan-Rios / Cid Ferreira / Reynaldo Linares-Palomino / Casimiro Mendoza / Italo Mesones / Germaine Alexander Parada / Armando Torres-Lezama / Ligia Estela Urrego Giraldo / Daniel Villarroel / Roderick Zagt / Miguel N. Alexiades / Edmar Almeida de Oliveira / Karina Garcia-Cabrera / Lionel Hernandez / Walter Palacios Cuenca / Susamar Pansini / Daniela Pauletto / Freddy Ramirez Arevalo / Adeilza Felipe Sampaio / Elvis H. Valderrama Sandoval / Luis Valenzuela Gamarra / Aurora Levesley / Georgia Pickavance / Karina Melgaço

    Communications Biology, Vol 6, Iss 1, Pp 1-

    2023  Volume 14

    Abstract: Abstract Using 2.046 botanically-inventoried tree plots across the largest tropical forest on Earth, we mapped tree species-diversity and tree species-richness at 0.1-degree resolution, and investigated drivers for diversity and richness. Using only ... ...

    Abstract Abstract Using 2.046 botanically-inventoried tree plots across the largest tropical forest on Earth, we mapped tree species-diversity and tree species-richness at 0.1-degree resolution, and investigated drivers for diversity and richness. Using only location, stratified by forest type, as predictor, our spatial model, to the best of our knowledge, provides the most accurate map of tree diversity in Amazonia to date, explaining approximately 70% of the tree diversity and species-richness. Large soil-forest combinations determine a significant percentage of the variation in tree species-richness and tree alpha-diversity in Amazonian forest-plots. We suggest that the size and fragmentation of these systems drive their large-scale diversity patterns and hence local diversity. A model not using location but cumulative water deficit, tree density, and temperature seasonality explains 47% of the tree species-richness in the terra-firme forest in Amazonia. Over large areas across Amazonia, residuals of this relationship are small and poorly spatially structured, suggesting that much of the residual variation may be local. The Guyana Shield area has consistently negative residuals, showing that this area has lower tree species-richness than expected by our models. We provide extensive plot meta-data, including tree density, tree alpha-diversity and tree species-richness results and gridded maps at 0.1-degree resolution.
    Keywords Biology (General) ; QH301-705.5
    Subject code 580
    Language English
    Publishing date 2023-11-01T00:00:00Z
    Publisher Nature Portfolio
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  6. Article ; Online: Biased-corrected richness estimates for the Amazonian tree flora

    Hans ter Steege / Paulo I. Prado / Renato A. F. de Lima / Edwin Pos / Luiz de Souza Coelho / Diogenes de Andrade Lima Filho / Rafael P. Salomão / Iêda Leão Amaral / Francisca Dionízia de Almeida Matos / Carolina V. Castilho / Oliver L. Phillips / Juan Ernesto Guevara / Marcelo de Jesus Veiga Carim / Dairon Cárdenas López / William E. Magnusson / Florian Wittmann / Maria Pires Martins / Daniel Sabatier / Mariana Victória Irume /
    José Renan da Silva Guimarães / Jean-François Molino / Olaf S. Bánki / Maria Teresa Fernandez Piedade / Nigel C. A. Pitman / José Ferreira Ramos / Abel Monteagudo Mendoza / Eduardo Martins Venticinque / Bruno Garcia Luize / Percy Núñez Vargas / Thiago Sanna Freire Silva / Evlyn Márcia Moraes de Leão Novo / Neidiane Farias Costa Reis / John Terborgh / Angelo Gilberto Manzatto / Katia Regina Casula / Euridice N. Honorio Coronado / Juan Carlos Montero / Alvaro Duque / Flávia R. C. Costa / Nicolás Castaño Arboleda / Jochen Schöngart / Charles Eugene Zartman / Timothy J. Killeen / Beatriz S. Marimon / Ben Hur Marimon-Junior / Rodolfo Vasquez / Bonifacio Mostacedo / Layon O. Demarchi / Ted R. Feldpausch / Julien Engel / Pascal Petronelli / Chris Baraloto / Rafael L. Assis / Hernán Castellanos / Marcelo Fragomeni Simon / Marcelo Brilhante de Medeiros / Adriano Quaresma / Susan G. W. Laurance / Lorena M. Rincón / Ana Andrade / Thaiane R. Sousa / José Luís Camargo / Juliana Schietti / William F. Laurance / Helder Lima de Queiroz / Henrique Eduardo Mendonça Nascimento / Maria Aparecida Lopes / Emanuelle de Sousa Farias / José Leonardo Lima Magalhães / Roel Brienen / Gerardo A. Aymard C. / Juan David Cardenas Revilla / Ima Célia Guimarães Vieira / Bruno Barçante Ladvocat Cintra / Pablo R. Stevenson / Yuri Oliveira Feitosa / Joost F. Duivenvoorden / Hugo F. Mogollón / Alejandro Araujo-Murakami / Leandro Valle Ferreira / José Rafael Lozada / James A. Comiskey / José Julio de Toledo / Gabriel Damasco / Nállarett Dávila / Aline Lopes / Roosevelt García-Villacorta / Freddie Draper / Alberto Vicentini / Fernando Cornejo Valverde / Jon Lloyd / Vitor H. F. Gomes / David Neill / Alfonso Alonso / Francisco Dallmeier / Fernanda Coelho de Souza / Rogerio Gribel / Luzmila Arroyo / Fernanda Antunes Carvalho / Daniel Praia Portela de Aguiar / Dário Dantas do Amaral / Marcelo Petratti Pansonato / Kenneth J. Feeley / Erika Berenguer / Paul V. A. Fine / Marcelino Carneiro Guedes / Jos Barlow / Joice Ferreira / Boris Villa / Maria Cristina Peñuela Mora / Eliana M. Jimenez / Juan Carlos Licona / Carlos Cerón / Raquel Thomas / Paul Maas / Marcos Silveira / Terry W. Henkel / Juliana Stropp / Marcos Ríos Paredes / Kyle G. Dexter / Doug Daly / Tim R. Baker / Isau Huamantupa-Chuquimaco / William Milliken / Toby Pennington / J. Sebastián Tello / José Luis Marcelo Pena / Carlos A. Peres / Bente Klitgaard / Alfredo Fuentes / Miles R. Silman / Anthony Di Fiore / Patricio von Hildebrand / Jerome Chave / Tinde R. van Andel / Renato Richard Hilário / Juan Fernando Phillips / Gonzalo Rivas-Torres / Janaína Costa Noronha / Adriana Prieto / Therany Gonzales / Rainiellene de Sá Carpanedo / George Pepe Gallardo Gonzales / Ricardo Zárate Gómez / Domingos de Jesus Rodrigues / Egleé L. Zent / Ademir R. Ruschel / Vincent Antoine Vos / Émile Fonty / André Braga Junqueira / Hilda Paulette Dávila Doza / Bruce Hoffman / Stanford Zent / Edelcilio Marques Barbosa / Yadvinder Malhi / Luiz Carlos de Matos Bonates / Ires Paula de Andrade Miranda / Natalino Silva / Flávia Rodrigues Barbosa / César I. A. Vela / Linder Felipe Mozombite Pinto / Agustín Rudas / Bianca Weiss Albuquerque / Maria Natalia Umaña / Yrma Andreina Carrero Márquez / Geertje van der Heijden / Kenneth R. Young / Milton Tirado / Diego F. Correa / Rodrigo Sierra / Janaina Barbosa Pedrosa Costa / Maira Rocha / Emilio Vilanova Torre / Ophelia Wang / Alexandre A. Oliveira / Michelle Kalamandeen / Corine Vriesendorp / Hirma Ramirez-Angulo / Milena Holmgren / Marcelo Trindade Nascimento / David Galbraith / Bernardo Monteiro Flores / Veridiana Vizoni Scudeller / Angela Cano / Manuel Augusto Ahuite Reategui / Italo Mesones / Cláudia Baider / Casimiro Mendoza / Roderick Zagt / Ligia Estela Urrego Giraldo / Cid Ferreira / Daniel Villarroel / Reynaldo Linares-Palomino / William Farfan-Rios / Luisa Fernanda Casas / Sasha Cárdenas / Henrik Balslev / Armando Torres-Lezama / Miguel N. Alexiades / Karina Garcia-Cabrera / Luis Valenzuela Gamarra / Elvis H. Valderrama Sandoval / Freddy Ramirez Arevalo / Lionel Hernandez / Adeilza Felipe Sampaio / Susamar Pansini / Walter Palacios Cuenca / Edmar Almeida de Oliveira / Daniela Pauletto / Aurora Levesley / Karina Melgaço / Georgia Pickavance

    Scientific Reports, Vol 10, Iss 1, Pp 1-

    2020  Volume 13

    Abstract: Abstract Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended ... ...

    Abstract Abstract Amazonian forests are extraordinarily diverse, but the estimated species richness is very much debated. Here, we apply an ensemble of parametric estimators and a novel technique that includes conspecific spatial aggregation to an extended database of forest plots with up-to-date taxonomy. We show that the species abundance distribution of Amazonia is best approximated by a logseries with aggregated individuals, where aggregation increases with rarity. By averaging several methods to estimate total richness, we confirm that over 15,000 tree species are expected to occur in Amazonia. We also show that using ten times the number of plots would result in an increase to just ~50% of those 15,000 estimated species. To get a more complete sample of all tree species, rigorous field campaigns may be needed but the number of trees in Amazonia will remain an estimate for years to come.
    Keywords Medicine ; R ; Science ; Q
    Language English
    Publishing date 2020-06-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  7. Article ; Online: Rarity of monodominance in hyperdiverse Amazonian forests

    Hans ter Steege / Terry W. Henkel / Nora Helal / Beatriz S. Marimon / Ben Hur Marimon-Junior / Andreas Huth / Jürgen Groeneveld / Daniel Sabatier / Luiz de Souza Coelho / Diogenes de Andrade Lima Filho / Rafael P. Salomão / Iêda Leão Amaral / Francisca Dionízia de Almeida Matos / Carolina V. Castilho / Oliver L. Phillips / Juan Ernesto Guevara / Marcelo de Jesus Veiga Carim / Dairon Cárdenas López / William E. Magnusson /
    Florian Wittmann / Mariana Victória Irume / Maria Pires Martins / José Renan da Silva Guimarães / Jean-François Molino / Olaf S. Bánki / Maria Teresa Fernandez Piedade / Nigel C. A. Pitman / Abel Monteagudo Mendoza / José Ferreira Ramos / Bruno Garcia Luize / Evlyn Márcia Moraes de Leão Novo / Percy Núñez Vargas / Thiago Sanna Freire Silva / Eduardo Martins Venticinque / Angelo Gilberto Manzatto / Neidiane Farias Costa Reis / John Terborgh / Katia Regina Casula / Euridice N. Honorio Coronado / Juan Carlos Montero / Ted R. Feldpausch / Alvaro Duque / Flávia R. C. Costa / Nicolás Castaño Arboleda / Jochen Schöngart / Timothy J. Killeen / Rodolfo Vasquez / Bonifacio Mostacedo / Layon O. Demarchi / Rafael L. Assis / Chris Baraloto / Julien Engel / Pascal Petronelli / Hernán Castellanos / Marcelo Brilhante de Medeiros / Adriano Quaresma / Marcelo Fragomeni Simon / Ana Andrade / José Luís Camargo / Susan G. W. Laurance / William F. Laurance / Lorena M. Rincón / Juliana Schietti / Thaiane R. Sousa / Emanuelle de Sousa Farias / Maria Aparecida Lopes / José Leonardo Lima Magalhães / Henrique Eduardo Mendonça Nascimento / Helder Lima de Queiroz / Gerardo A. Aymard C. / Roel Brienen / Juan David Cardenas Revilla / Ima Célia Guimarães Vieira / Bruno Barçante Ladvocat Cintra / Pablo R. Stevenson / Yuri Oliveira Feitosa / Joost F. Duivenvoorden / Hugo F. Mogollón / Alejandro Araujo-Murakami / Leandro Valle Ferreira / José Rafael Lozada / James A. Comiskey / José Julio de Toledo / Gabriel Damasco / Nállarett Dávila / Freddie Draper / Roosevelt García-Villacorta / Aline Lopes / Alberto Vicentini / Alfonso Alonso / Francisco Dallmeier / Vitor H. F. Gomes / Jon Lloyd / David Neill / Daniel Praia Portela de Aguiar / Luzmila Arroyo / Fernanda Antunes Carvalho / Fernanda Coelho de Souza / Dário Dantas do Amaral / Kenneth J. Feeley / Rogerio Gribel / Marcelo Petratti Pansonato / Jos Barlow / Erika Berenguer / Joice Ferreira / Paul V. A. Fine / Marcelino Carneiro Guedes / Eliana M. Jimenez / Juan Carlos Licona / Maria Cristina Peñuela Mora / Boris Villa / Carlos Cerón / Paul Maas / Marcos Silveira / Juliana Stropp / Raquel Thomas / Tim R. Baker / Doug Daly / Kyle G. Dexter / Isau Huamantupa-Chuquimaco / William Milliken / Toby Pennington / Marcos Ríos Paredes / Alfredo Fuentes / Bente Klitgaard / José Luis Marcelo Pena / Carlos A. Peres / Miles R. Silman / J. Sebastián Tello / Jerome Chave / Fernando Cornejo Valverde / Anthony Di Fiore / Renato Richard Hilário / Juan Fernando Phillips / Gonzalo Rivas-Torres / Tinde R. van Andel / Patricio von Hildebrand / Janaína Costa Noronha / Edelcilio Marques Barbosa / Flávia Rodrigues Barbosa / Luiz Carlos de Matos Bonates / Rainiellen de Sá Carpanedo / Hilda Paulette Dávila Doza / Émile Fonty / Ricardo GómeZárate z / Therany Gonzales / George Pepe Gallardo Gonzales / Bruce Hoffman / André Braga Junqueira / Yadvinder Malhi / Ires Paula de Andrade Miranda / Linder Felipe Mozombite Pinto / Adriana Prieto / Domingos de Jesus Rodrigues / Agustín Rudas / Ademir R. Ruschel / Natalino Silva / César I. A. Vela / Vincent Antoine Vos / Egleé L. Zent / Stanford Zent / Bianca Weiss Albuquerque / Angela Cano / Yrma Andreina Carrero Márquez / Diego F. Correa / Janaina Barbosa Pedrosa Costa / Bernardo Monteiro Flores / David Galbraith / Milena Holmgren / Michelle Kalamandeen / Marcelo Trindade Nascimento / Alexandre A. Oliveira / Hirma Ramirez-Angulo / Maira Rocha / Veridiana Vizoni Scudeller / Rodrigo Sierra / Milton Tirado / Maria Natalia Umaña Medina / Geertje van der Heijden / Emilio Vilanova Torre / Corine Vriesendorp / Ophelia Wang / Kenneth R. Young / Manuel Augusto Ahuite Reategui / Cláudia Baider / Henrik Balslev / Sasha Cárdenas / Luisa Fernanda Casas / William Farfan-Rios / Cid Ferreira / Reynaldo Linares-Palomino / Casimiro Mendoza / Italo Mesones / Armando Torres-Lezama / Ligia Estela Urrego Giraldo / Daniel Villarroel / Roderick Zagt / Miguel N. Alexiades / Edmar Almeida de Oliveira / Karina Garcia-Cabrera / Lionel Hernandez / Walter Palacios Cuenca / Susamar Pansini / Daniela Pauletto / Freddy Ramirez Arevalo / Adeilza Felipe Sampaio / Elvis H. Valderrama Sandoval / Luis Valenzuela Gamarra / Aurora Levesley / Georgia Pickavance / Karina Melgaço

    Scientific Reports, Vol 9, Iss 1, Pp 1-

    2019  Volume 15

    Abstract: Abstract Tropical forests are known for their high diversity. Yet, forest patches do occur in the tropics where a single tree species is dominant. Such “monodominant” forests are known from all of the main tropical regions. For Amazonia, we sampled the ... ...

    Abstract Abstract Tropical forests are known for their high diversity. Yet, forest patches do occur in the tropics where a single tree species is dominant. Such “monodominant” forests are known from all of the main tropical regions. For Amazonia, we sampled the occurrence of monodominance in a massive, basin-wide database of forest-inventory plots from the Amazon Tree Diversity Network (ATDN). Utilizing a simple defining metric of at least half of the trees ≥ 10 cm diameter belonging to one species, we found only a few occurrences of monodominance in Amazonia, and the phenomenon was not significantly linked to previously hypothesized life history traits such wood density, seed mass, ectomycorrhizal associations, or Rhizobium nodulation. In our analysis, coppicing (the formation of sprouts at the base of the tree or on roots) was the only trait significantly linked to monodominance. While at specific locales coppicing or ectomycorrhizal associations may confer a considerable advantage to a tree species and lead to its monodominance, very few species have these traits. Mining of the ATDN dataset suggests that monodominance is quite rare in Amazonia, and may be linked primarily to edaphic factors.
    Keywords Medicine ; R ; Science ; Q
    Subject code 580
    Language English
    Publishing date 2019-09-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  8. Article ; Online: Species Distribution Modelling

    Vitor H. F. Gomes / Stéphanie D. IJff / Niels Raes / Iêda Leão Amaral / Rafael P. Salomão / Luiz de Souza Coelho / Francisca Dionízia de Almeida Matos / Carolina V. Castilho / Diogenes de Andrade Lima Filho / Dairon Cárdenas López / Juan Ernesto Guevara / William E. Magnusson / Oliver L. Phillips / Florian Wittmann / Marcelo de Jesus Veiga Carim / Maria Pires Martins / Mariana Victória Irume / Daniel Sabatier / Jean-François Molino /
    Olaf S. Bánki / José Renan da Silva Guimarães / Nigel C. A. Pitman / Maria Teresa Fernandez Piedade / Abel Monteagudo Mendoza / Bruno Garcia Luize / Eduardo Martins Venticinque / Evlyn Márcia Moraes de Leão Novo / Percy Núñez Vargas / Thiago Sanna Freire Silva / Angelo Gilberto Manzatto / John Terborgh / Neidiane Farias Costa Reis / Juan Carlos Montero / Katia Regina Casula / Beatriz S. Marimon / Ben-Hur Marimon / Euridice N. Honorio Coronado / Ted R. Feldpausch / Alvaro Duque / Charles Eugene Zartman / Nicolás Castaño Arboleda / Timothy J. Killeen / Bonifacio Mostacedo / Rodolfo Vasquez / Jochen Schöngart / Rafael L. Assis / Marcelo Brilhante Medeiros / Marcelo Fragomeni Simon / Ana Andrade / William F. Laurance / José Luís Camargo / Layon O. Demarchi / Susan G. W. Laurance / Emanuelle de Sousa Farias / Henrique Eduardo Mendonça Nascimento / Juan David Cardenas Revilla / Adriano Quaresma / Flavia R. C. Costa / Ima Célia Guimarães Vieira / Bruno Barçante Ladvocat Cintra / Hernán Castellanos / Roel Brienen / Pablo R. Stevenson / Yuri Feitosa / Joost F. Duivenvoorden / Gerardo A. Aymard C. / Hugo F. Mogollón / Natalia Targhetta / James A. Comiskey / Alberto Vicentini / Aline Lopes / Gabriel Damasco / Nállarett Dávila / Roosevelt García-Villacorta / Carolina Levis / Juliana Schietti / Priscila Souza / Thaise Emilio / Alfonso Alonso / David Neill / Francisco Dallmeier / Leandro Valle Ferreira / Alejandro Araujo-Murakami / Daniel Praia / Dário Dantas do Amaral / Fernanda Antunes Carvalho / Fernanda Coelho de Souza / Kenneth Feeley / Luzmila Arroyo / Marcelo Petratti Pansonato / Rogerio Gribel / Boris Villa / Juan Carlos Licona / Paul V. A. Fine / Carlos Cerón / Chris Baraloto / Eliana M. Jimenez / Juliana Stropp / Julien Engel / Marcos Silveira / Maria Cristina Peñuela Mora / Pascal Petronelli / Paul Maas / Raquel Thomas-Caesar / Terry W. Henkel / Doug Daly / Marcos Ríos Paredes / Tim R. Baker / Alfredo Fuentes / Carlos A. Peres / Jerome Chave / Jose Luis Marcelo Pena / Kyle G. Dexter / Miles R. Silman / Peter Møller Jørgensen / Toby Pennington / Anthony Di Fiore / Fernando Cornejo Valverde / Juan Fernando Phillips / Gonzalo Rivas-Torres / Patricio von Hildebrand / Tinde R. van Andel / Ademir R. Ruschel / Adriana Prieto / Agustín Rudas / Bruce Hoffman / César I. A. Vela / Edelcilio Marques Barbosa / Egleé L. Zent / George Pepe Gallardo Gonzales / Hilda Paulette Dávila Doza / Ires Paula de Andrade Miranda / Jean-Louis Guillaumet / Linder Felipe Mozombite Pinto / Luiz Carlos de Matos Bonates / Natalino Silva / Ricardo Zárate Gómez / Stanford Zent / Therany Gonzales / Vincent A. Vos / Yadvinder Malhi / Alexandre A. Oliveira / Angela Cano / Bianca Weiss Albuquerque / Corine Vriesendorp / Diego Felipe Correa / Emilio Vilanova Torre / Geertje van der Heijden / Hirma Ramirez-Angulo / José Ferreira Ramos / Kenneth R. Young / Maira Rocha / Marcelo Trindade Nascimento / Maria Natalia Umaña Medina / Milton Tirado / Ophelia Wang / Rodrigo Sierra / Armando Torres-Lezama / Casimiro Mendoza / Cid Ferreira / Cláudia Baider / Daniel Villarroel / Henrik Balslev / Italo Mesones / Ligia Estela Urrego Giraldo / Luisa Fernanda Casas / Manuel Augusto Ahuite Reategui / Reynaldo Linares-Palomino / Roderick Zagt / Sasha Cárdenas / William Farfan-Rios / Adeilza Felipe Sampaio / Daniela Pauletto / Elvis H. Valderrama Sandoval / Freddy Ramirez Arevalo / Isau Huamantupa-Chuquimaco / Karina Garcia-Cabrera / Lionel Hernandez / Luis Valenzuela Gamarra / Miguel N. Alexiades / Susamar Pansini / Walter Palacios Cuenca / William Milliken / Joana Ricardo / Gabriela Lopez-Gonzalez / Edwin Pos / Hans ter Steege

    Scientific Reports, Vol 8, Iss 1, Pp 1-

    Contrasting presence-only models with plot abundance data

    2018  Volume 12

    Abstract: Abstract Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often ... ...

    Abstract Abstract Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often spatially biased which may generate inaccuracies in SDMs. Here, we test how the distribution of NHCs and MaxEnt predictions relates to a spatial abundance model, based on a large plot dataset for Amazonian tree species, using inverse distance weighting (IDW). We also propose a new pipeline to deal with inconsistencies in NHCs and to limit the area of occupancy of the species. We found a significant but weak positive relationship between the distribution of NHCs and IDW for 66% of the species. The relationship between SDMs and IDW was also significant but weakly positive for 95% of the species, and sensitivity for both analyses was high. Furthermore, the pipeline removed half of the NHCs records. Presence-only SDM applications should consider this limitation, especially for large biodiversity assessments projects, when they are automatically generated without subsequent checking. Our pipeline provides a conservative estimate of a species’ area of occupancy, within an area slightly larger than its extent of occurrence, compatible to e.g. IUCN red list assessments.
    Keywords Medicine ; R ; Science ; Q
    Subject code 590
    Language English
    Publishing date 2018-01-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  9. Article: Hyperdominance in the Amazonian Tree Flora

    ter Steege, Hans / Abel Monteagudo / Ademir R. Ruschell / Adriana Prieto / Agustín Rudas / Alejandro Araujo-Murakami / Alexandre A. Oliveira / Alfonso Alonso / Alfredo Fuentes / Alvaro Javier Duque Montoya / Ana Andrade / Angela Cano Schutz / Anthony Di Fiore / Armando Torres-Lezama / Beatriz S. Marimon / Ben-Hur Marimon / Bonifacio Mostacedo / Bruce Hoffman / César I. A. Vela /
    Carlos A. Peres / Carlos Cerón / Carolina Levis / Carolina V. Castilho / Charles Eugene Zartman / Christopher Baraloto / Cid Ferreira / Claudia Baider / Corine Vriesendorp / Dairon Cárdenas López / Daniel Sabatier / Daniela Pauletto / David Neill / Diógenes de Andrade Lima Filho / Doug Daly / Eglée L. Zent / Eliana M. Jimenez / Elvis Valderrama Sandoval / Emilio Vilanova Torre / Eurídice N. Honorio Coronado / Fernando Cornejo Valverde / Flávia Costa / Florian Wittmann / Francisca Dionízia de Almeida Matos / Francisco Dallmeier / Gabriela Lopez-Gonzalez / Geertje van der Heijden / Gerardo A. Aymard C / Gonzalo Rivas / Henrik Balslev / Hernán Castellanos / Hirma Ramirez-Angulo / Hugo F. Mogollón / Iêda Leão Amaral / Ima Célia Guimarães Vieira / Isau Huamantupa-Chuquimaco / Italo Mesones / Jean-François Molino / Jerome Chave / Jochen Schöngart / John Terborgh / Joost F. Duivenvoorden / Juan Carlos Montero / Juan Ernesto Guevara / Juan Fernando Phillips / Juliana Schietti / Juliana Stropp / Julien Engel / Ken Feeley / Kenneth R. Young / Kyle G. Dexter / Ligia Estela Urrego Giraldo / Lionel Hernandez / Luis Valenzuela Gamarra / Luzmila Arroyo / María Natalia Umaña Medina / Marcelo Trindade Nascimento / Marcos Ríos Paredes / Marcos Silveira / Maria Cristina Peñuela Mora / Maria Teresa Fernandez Piedade / Marisol Toledo / Miguel N. Alexiades / Miles R. Silman / Milton Tirado / Nállarett Dávila / Natalino Silva / Nigel C. A. Pitman / Oliver L. Phillips / Ophelia Wang / Pablo Roberto Stevenson Diaz / Pascal Petronelli / Patricio von Hildebrand / Paul Maas / Paul V. A. Fine / Percy Núñez Vargas / Peter Møller Jørgensen / Priscila Souza / Rafael L. Assis / Rafael P. Salomão / Roderick Zagt / Rodolfo Vasquez / Rodrigo Sierra / Roel Brienen / Rogerio Gribel / Roosevelt García-Villacorta / Stanford Zent / Susan G. W. Laurance / Ted R. Feldpausch / Terry W. Henkel / Thaise Emilio / Therany Gonzales / Tim J. Killeen / Tim R. Baker / Tinde R. van Andel / Vincent Vos / Walter Palacios Cuenca / William E. Magnusson / William F. Laurance / William Milliken / Yadvinder Malhi

    Science. 2013 Oct. 18, v. 342, no. 6156

    2013  

    Abstract: Seeing the Trees in the Forest Despite botanical exploration over two centuries, knowledge of the species composition and quantitative distribution of the trees of the Amazonian forest has remained decidedly patchy. Ter Steege et al. (1243092) report the ...

    Abstract Seeing the Trees in the Forest Despite botanical exploration over two centuries, knowledge of the species composition and quantitative distribution of the trees of the Amazonian forest has remained decidedly patchy. Ter Steege et al. (1243092) report the results from a network of 1170 tree plots arrayed across the Amazon Basin and Guiana Shield, in which the species of all trees with stem diameter >10 centimeters were identified. The tree flora comprised a total of about 16,000 species. However, just 227 very common Amazonian species accounted for half of the trees in the Amazon—the world's most diverse forest.
    Keywords basins ; flora ; forests ; species diversity ; trees
    Language English
    Dates of publication 2013-1018
    Size p. 1243092.
    Publishing place American Association for the Advancement of Science
    Document type Article
    ZDB-ID 128410-1
    ISSN 1095-9203 ; 0036-8075
    ISSN (online) 1095-9203
    ISSN 0036-8075
    DOI 10.1126/science.1243092
    Database NAL-Catalogue (AGRICOLA)

    More links

    Kategorien

To top