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  1. Article ; Online: Arabidopsis GELP7 functions as a plasma membrane-localized acetyl xylan esterase, and its overexpression improves saccharification efficiency.

    Rastogi, Lavi / Chaudhari, Aniket Anant / Sharma, Raunak / Pawar, Prashant Anupama-Mohan

    Plant molecular biology

    2022  Volume 109, Issue 6, Page(s) 781–797

    Abstract: Acetyl substitution on the xylan chain is critical for stable interaction with cellulose and other cell wall polymers in the secondary cell wall. Xylan acetylation pattern is governed by Golgi and extracellular localized acetyl xylan esterase (AXE). We ... ...

    Abstract Acetyl substitution on the xylan chain is critical for stable interaction with cellulose and other cell wall polymers in the secondary cell wall. Xylan acetylation pattern is governed by Golgi and extracellular localized acetyl xylan esterase (AXE). We investigated the role of Arabidopsis clade Id from the GDSL esterase/lipase or GELP family in polysaccharide deacetylation. The investigation of the AtGELP7 T-DNA mutant line showed a decrease in stem esterase activity and an increase in stem acetyl content. We further generated overexpressor AtGELP7 transgenic lines, and these lines showed an increase in AXE activity and a decrease in xylan acetylation compared to wild-type plants. Therefore, we have named this enzyme as AtAXE1. The subcellular localization and immunoblot studies showed that the AtAXE1 enzyme is secreted out, associated with the plasma membrane and involved in xylan de-esterification post-synthesis. The cellulose digestibility was improved in AtAXE1 overexpressor lines without pre-treatment, after alkali and xylanases pre-treatment. Furthermore, we have also established that the AtGELP7 gene is upregulated in the overexpressor line of AtMYB46, a secondary cell wall specific transcription factor. This transcriptional regulation can drive AtGELP7 or AtAXE1 to perform de-esterification of xylan in a tissue-specific manner. Overall, these data suggest that AtGELP7 overexpression in Arabidopsis reduces xylan acetylation and improves digestibility properties of polysaccharides of stem lignocellulosic biomass.
    MeSH term(s) Acetylesterase ; Arabidopsis/genetics ; Arabidopsis/metabolism ; Cell Membrane/metabolism ; Cell Wall/metabolism ; Cellulose/metabolism ; Esterases/genetics ; Polysaccharides/metabolism ; Xylans/metabolism
    Chemical Substances Polysaccharides ; Xylans ; Cellulose (9004-34-6) ; Esterases (EC 3.1.-) ; Acetylesterase (EC 3.1.1.6) ; acetylxylan esterase (EC 3.1.1.72)
    Language English
    Publishing date 2022-05-17
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 778032-1
    ISSN 1573-5028 ; 0167-4412
    ISSN (online) 1573-5028
    ISSN 0167-4412
    DOI 10.1007/s11103-022-01275-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Arabidopsis GELP7 functions as a plasma membrane-localized acetyl xylan esterase, and its overexpression improves saccharification efficiency

    Rastogi, Lavi / Chaudhari, Aniket Anant / Sharma, Raunak / Pawar, Prashant Anupama-Mohan

    Plant molecular biology. 2022 Aug., v. 109, no. 6

    2022  

    Abstract: Acetyl substitution on the xylan chain is critical for stable interaction with cellulose and other cell wall polymers in the secondary cell wall. Xylan acetylation pattern is governed by Golgi and extracellular localized acetyl xylan esterase (AXE). We ... ...

    Abstract Acetyl substitution on the xylan chain is critical for stable interaction with cellulose and other cell wall polymers in the secondary cell wall. Xylan acetylation pattern is governed by Golgi and extracellular localized acetyl xylan esterase (AXE). We investigated the role of Arabidopsis clade Id from the GDSL esterase/lipase or GELP family in polysaccharide deacetylation. The investigation of the AtGELP7 T-DNA mutant line showed a decrease in stem esterase activity and an increase in stem acetyl content. We further generated overexpressor AtGELP7 transgenic lines, and these lines showed an increase in AXE activity and a decrease in xylan acetylation compared to wild-type plants. Therefore, we have named this enzyme as AtAXE1. The subcellular localization and immunoblot studies showed that the AtAXE1 enzyme is secreted out, associated with the plasma membrane and involved in xylan de-esterification post-synthesis. The cellulose digestibility was improved in AtAXE1 overexpressor lines without pre-treatment, after alkali and xylanases pre-treatment. Furthermore, we have also established that the AtGELP7 gene is upregulated in the overexpressor line of AtMYB46, a secondary cell wall specific transcription factor. This transcriptional regulation can drive AtGELP7 or AtAXE1 to perform de-esterification of xylan in a tissue-specific manner. Overall, these data suggest that AtGELP7 overexpression in Arabidopsis reduces xylan acetylation and improves digestibility properties of polysaccharides of stem lignocellulosic biomass.
    Keywords Arabidopsis ; acetylation ; biomass ; carboxylic ester hydrolases ; cell walls ; cellulose ; digestibility ; genes ; genetically modified organisms ; lignocellulose ; molecular biology ; mutants ; plasma membrane ; saccharification ; transcription (genetics) ; transcription factors ; xylan ; xylanases
    Language English
    Dates of publication 2022-08
    Size p. 781-797.
    Publishing place Springer Netherlands
    Document type Article
    ZDB-ID 778032-1
    ISSN 1573-5028 ; 0167-4412
    ISSN (online) 1573-5028
    ISSN 0167-4412
    DOI 10.1007/s11103-022-01275-8
    Database NAL-Catalogue (AGRICOLA)

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  3. Article ; Online: Xylobiose treatment triggers a defense-related response and alters cell wall composition.

    Dewangan, Bhagwat Prasad / Gupta, Arunima / Sah, Rajan Kumar / Das, Shouvik / Kumar, Sandeep / Bhattacharjee, Saikat / Pawar, Prashant Anupama-Mohan

    Plant molecular biology

    2023  Volume 113, Issue 6, Page(s) 383–400

    Abstract: Plant cell wall-derived oligosaccharides, i.e., damage-associated molecular patterns (DAMPs), could be generated after pathogen attack or during normal plant development, perceived by cell wall receptors, and can alter immunity and cell wall composition. ...

    Abstract Plant cell wall-derived oligosaccharides, i.e., damage-associated molecular patterns (DAMPs), could be generated after pathogen attack or during normal plant development, perceived by cell wall receptors, and can alter immunity and cell wall composition. Therefore, we hypothesised that xylo-oligosaccharides (XOS) could act as an elicitor and trigger immune responses. To test this, we treated Arabidopsis with xylobiose (XB) and investigated different parameters. XB-treatment significantly triggered the generation of reactive oxygen species (ROS), activated MAPK protein phosphorylation, and induced callose deposition. The combination of XB (DAMP) and flg22 a microbe-associated molecular pattern (MAMP) further enhanced ROS response and gene expression of PTI marker genes. RNA sequencing analysis revealed that more genes were differentially regulated after 30 min compared to 24 h XB-treated leaves, which correlated with ROS response. Increased xylosidase activity and soluble xylose level after 30 min and 3 h of XB-treatment were observed which might have weakened the DAMP response. However, an increase in total cell wall sugar and a decrease in uronic acid level was observed at both 30 min and 24 h. Additionally, arabinose, rhamnose, and xylose levels were increased in 30 min, and glucose was increased in 24 h compared to mock-treated leaves. The level of jasmonic acid, abscisic acid, auxin, and cytokinin were also affected after XB treatment. Overall, our data revealed that the shortest XOS can act as a DAMP, which triggers the PTI response and alters cell wall composition and hormone level.
    MeSH term(s) Arabidopsis Proteins/genetics ; Arabidopsis Proteins/metabolism ; Reactive Oxygen Species/metabolism ; Xylose/metabolism ; Arabidopsis/metabolism ; Cell Wall/metabolism ; Oligosaccharides/metabolism ; Plant Immunity/genetics ; Gene Expression Regulation, Plant
    Chemical Substances Arabidopsis Proteins ; xylobiose (ID02R0EG7P) ; Reactive Oxygen Species ; Xylose (A1TA934AKO) ; Oligosaccharides
    Language English
    Publishing date 2023-11-22
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 778032-1
    ISSN 1573-5028 ; 0167-4412
    ISSN (online) 1573-5028
    ISSN 0167-4412
    DOI 10.1007/s11103-023-01391-z
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Morpho-biochemical characterization of a RIL population for seed parameters and identification of candidate genes regulating seed size trait in lentil (

    Dutta, Haragopal / K M, Shivaprasad / Aski, Muraleedhar S / Mishra, Gyan P / Sinha, Subodh Kumar / Vijay, Dunna / C T, Manjunath Prasad / Das, Shouvik / Pawar, Prashant Anupama-Mohan / Mishra, Dwijesh C / Singh, Amit Kumar / Kumar, Atul / Tripathi, Kuldeep / Kumar, Ranjeet Ranjan / Gupta, Sanjeev / Kumar, Shiv / Dikshit, Harsh Kumar

    Frontiers in plant science

    2023  Volume 14, Page(s) 1091432

    Abstract: The seed size and shape in lentil ( ...

    Abstract The seed size and shape in lentil (
    Language English
    Publishing date 2023-02-15
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2613694-6
    ISSN 1664-462X
    ISSN 1664-462X
    DOI 10.3389/fpls.2023.1091432
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Comparative transcriptome analysis, unfolding the pathways regulating the seed-size trait in cultivated lentil (

    Dutta, Haragopal / Mishra, Gyan P / Aski, Muraleedhar S / Bosamia, Tejas C / Mishra, Dwijesh C / Bhati, Jyotika / Sinha, Subodh Kumar / Vijay, Dunna / C T, Manjunath Prasad / Das, Shouvik / Pawar, Prashant Anupama-Mohan / Kumar, Atul / Tripathi, Kuldeep / Kumar, Ranjeet Ranjan / Yadava, Devendra Kumar / Kumar, Shiv / Dikshit, Harsh Kumar

    Frontiers in genetics

    2022  Volume 13, Page(s) 942079

    Abstract: Market class, cooking time, quality, and milled grain yield are largely influenced by the seed size and shape of the lentil ( ...

    Abstract Market class, cooking time, quality, and milled grain yield are largely influenced by the seed size and shape of the lentil (
    Language English
    Publishing date 2022-08-10
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2606823-0
    ISSN 1664-8021
    ISSN 1664-8021
    DOI 10.3389/fgene.2022.942079
    Database MEDical Literature Analysis and Retrieval System OnLINE

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