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  1. Article ; Online: Comparison of LC-MS-MS and GC-MS Analysis of Benzodiazepine Compounds Included in the Drug Demand Reduction Urinalysis Program.

    Perez, Erick Roman / Knapp, Joshua A / Horn, Carl K / Stillman, Stedra L / Evans, James E / Arfsten, Darryl P

    Journal of analytical toxicology

    2016  Volume 40, Issue 3, Page(s) 201–207

    Abstract: Liquid chromatography-tandem mass spectrometry (LC-MS-MS) offers specific advantages over gas chromatography-mass spectrometry (GC-MS) such as the ability to identify and measure a broader range of compounds with minimal sample preparation. Comparative ... ...

    Abstract Liquid chromatography-tandem mass spectrometry (LC-MS-MS) offers specific advantages over gas chromatography-mass spectrometry (GC-MS) such as the ability to identify and measure a broader range of compounds with minimal sample preparation. Comparative analysis of LC-MS-MS versus GC-MS was performed for urinalysis detection of five benzodiazepine compounds currently part of the Department of Defense (DoD) Drug Demand Reduction Program (DDRP) testing panel; alpha-hydroxyalprazolam, oxazepam, lorazepam, nordiazepam and temazepam. In the analyses of internally prepared control urine samples at concentrations around the DDRP administrative decision point for benzodiazepines (100 ng/mL), both technologies produced comparable results with average accuracies between 99.7 and 107.3% and average coefficients of variation (%CV) <9%. Analysis of service member specimens that screened positive for benzodiazepines using both technologies produced comparable results for all analytes. Different degrees of matrix effect were observed for all analytes in the LC-MS-MS analysis. However, the effects were controlled by using deuterated internal standards (ISTDs). Additionally, there was a 39% increase in nordiazepam mean concentration analyzed by LC-MS-MS due to suppression of the ISTD ion by the flurazepam metabolite 2-hydroxyethylflurazepam. The ease and speed of sample extraction, the broader range of compounds that can be analyzed and shorter run time make the LC-MS-MS technology a suitable and expedient alternative confirmation technology for benzodiazepine testing.
    MeSH term(s) Benzodiazepines/urine ; Chromatography, Liquid/methods ; Gas Chromatography-Mass Spectrometry/methods ; Humans ; Limit of Detection ; Tandem Mass Spectrometry/methods
    Chemical Substances Benzodiazepines (12794-10-4)
    Language English
    Publishing date 2016-04
    Publishing country England
    Document type Comparative Study ; Journal Article
    ZDB-ID 752391-9
    ISSN 1945-2403 ; 0146-4760
    ISSN (online) 1945-2403
    ISSN 0146-4760
    DOI 10.1093/jat/bkv140
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Activation of host wound responses in breast cancer microenvironment.

    Troester, Melissa A / Lee, Myung Hee / Carter, Matthew / Fan, Cheng / Cowan, David W / Perez, Erick Roman / Pirone, Jason R / Perou, Charles M / Jerry, D Joseph / Schneider, Sallie Smith

    Clinical cancer research : an official journal of the American Association for Cancer Research

    2009  Volume 15, Issue 22, Page(s) 7020–7028

    Abstract: Purpose: Cancer progression is mediated by processes that are also important in wound repair. As a result, cancers have been conceptualized as overhealing wounds or "wounds that do not heal," and gene expression signatures reflective of wound repair ... ...

    Abstract Purpose: Cancer progression is mediated by processes that are also important in wound repair. As a result, cancers have been conceptualized as overhealing wounds or "wounds that do not heal," and gene expression signatures reflective of wound repair have shown value as predictors of breast cancer survival. Despite the widespread acknowledgment of commonalities between host responses to wounds and host responses to cancer, the gene expression responses of normal tissue adjacent to cancers have not been well characterized.
    Experimental design: Using RNA extracted from histologically normal breast tissue from 107 patients, including 60 reduction mammoplasty patients and 47 cancer patients, we measured whole genome expression profiles and identified a gene expression signature that is induced in response to breast cancer.
    Results: This signature represents an in vivo "wound response" signature that is differentially expressed in the normal tissue of breast cancer patients compared with those without disease and is highly accurate (at least 92% sensitivity and 98% specificity) in distinguishing diseased and nondiseased. The in vivo wound response signature is highly prognostic of breast cancer survival, and there is a strong association between the groups identified by this signature and those identified using serum-treated fibroblasts and other microenvironment-derived or microenvironment-related signatures.
    Conclusions: The prevalence of the wound response signature in histologically normal tissue adjacent to breast cancer suggests that microenvironment response is an important variable in breast cancer progression and may be an important target for clinical interventions.
    MeSH term(s) Breast/pathology ; Breast/surgery ; Breast Neoplasms/metabolism ; Breast Neoplasms/pathology ; Breast Neoplasms/surgery ; Cyclooxygenase 2/metabolism ; Cysteine-Rich Protein 61/metabolism ; Disease Progression ; Female ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic ; Genome, Human ; Humans ; Immunohistochemistry/methods ; Mammaplasty ; Neovascularization, Pathologic ; Reproducibility of Results ; Wound Healing
    Chemical Substances CCN1 protein, human ; Cysteine-Rich Protein 61 ; Cyclooxygenase 2 (EC 1.14.99.1) ; PTGS2 protein, human (EC 1.14.99.1)
    Language English
    Publishing date 2009-11-03
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 1225457-5
    ISSN 1557-3265 ; 1078-0432
    ISSN (online) 1557-3265
    ISSN 1078-0432
    DOI 10.1158/1078-0432.CCR-09-1126
    Database MEDical Literature Analysis and Retrieval System OnLINE

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