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  1. Article ; Online: Immunoinformatics approach to design next-generation epitope-based peptide vaccine against Peste des Petits Ruminants Virus (PPRV)

    Riaz, Rimsha / Zahid, Saira / Khan, Muhammad Sarwar

    Process Biochemistry. 2023 Apr. 11,

    2023  

    Abstract: PPR is a small ruminant infectious illness that is wreaking havoc on economies in South Asia and Africa. Due to several hurdles, such as resistant strains and a limited regulatory framework, existing therapeutic vaccinations have failed to eradicate the ... ...

    Abstract PPR is a small ruminant infectious illness that is wreaking havoc on economies in South Asia and Africa. Due to several hurdles, such as resistant strains and a limited regulatory framework, existing therapeutic vaccinations have failed to eradicate the disease. To overcome these challenges, a peptide-based vaccination with distinct immunological characteristics and less vulnerability to contamination, autoimmunity, and inflammatory diseases would be useful in accomplishing the suggested eradication goal. The possible CTL and B-cell epitopes of PPRV's four immunogenic proteins (H, F, M, and N) were predicted using a variety of immunoinformatic methods. Protein-protein docking confirmed that the proposed chimeric vaccine has a considerable affinity for the ovine toll-like receptor. In a biological system, the molecular dynamic simulation confirmed the in vivo stability of the protein. The immune simulation predicted the induction of immunoglobulins, interleukins, interferons, helper T cells, and cytotoxic T cells, which is critical for boosting host immunity during infection. Moreover, the translation efficiency was verified through in silico cloning of the vaccine in a bacterial expression system following codon optimization. Thus, our findings suggest that the candidate vaccine will help in provoking a robust and long-lasting immunity in animals against PPRV infection.
    Keywords B-lymphocytes ; Toll-like receptors ; autoimmunity ; computer simulation ; cytotoxicity ; epitopes ; immunoglobulins ; immunoinformatics ; interleukins ; recombinant vaccines ; sheep ; vaccination ; Africa ; South Asia ; CTL epitopes ; B-cell epitopes ; Multi-Epitope Vaccine (MEV) ; Molecular docking ; Immune simulation
    Language English
    Dates of publication 2023-0411
    Publishing place Elsevier Ltd
    Document type Article ; Online
    Note Pre-press version
    ISSN 1359-5113
    DOI 10.1016/j.procbio.2023.04.009
    Database NAL-Catalogue (AGRICOLA)

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  2. Article: The tobacco chloroplast

    Khan, Muhammad Sarwar / Riaz, Rimsha / Majid, Muhammad / Mehmood, Kashif / Mustafa, Ghulam / Joyia, Faiz Ahmad

    Frontiers in plant science

    2022  Volume 13, Page(s) 1014236

    Abstract: A tobacco chloroplast hypothetical open reading frame 4 (YCF4) has been reported as a non-essential assembly factor for photosynthesis based on an incomplete knockout of YCF4, just 93 of 184 amino acids from the N-terminus were knocked out. On the other ... ...

    Abstract A tobacco chloroplast hypothetical open reading frame 4 (YCF4) has been reported as a non-essential assembly factor for photosynthesis based on an incomplete knockout of YCF4, just 93 of 184 amino acids from the N-terminus were knocked out. On the other hand, we removed the complete sequence of
    Language English
    Publishing date 2022-10-24
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2613694-6
    ISSN 1664-462X
    ISSN 1664-462X
    DOI 10.3389/fpls.2022.1014236
    Database MEDical Literature Analysis and Retrieval System OnLINE

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