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  1. Article ; Online: Respiratory syncytial virus burden and risk factors for severe disease in patients presenting to the emergency department with flu-like symptoms or acute respiratory failure.

    Santus, Pierachille / Radovanovic, Dejan / Gismondo, Maria Rita / Rimoldi, Sara Giordana / Lombardi, Alessandra / Danzo, Fiammetta / Gori, Andrea / Antinori, Spinello / Rizzardini, Giuliano

    Respiratory medicine

    2023  Volume 218, Page(s) 107404

    Abstract: Background: Predictors of Respiratory Syncytial Virus (RSV) infection and determinants of RSV unfavorable outcomes are still unclear. We assessed RSV burden and investigated the risk factors associated with RSV positive swab and RSV severe disease.: ... ...

    Abstract Background: Predictors of Respiratory Syncytial Virus (RSV) infection and determinants of RSV unfavorable outcomes are still unclear. We assessed RSV burden and investigated the risk factors associated with RSV positive swab and RSV severe disease.
    Methods: A retrospective, single center, cohort study included all consecutive patients referred to the emergency department of L. Sacco University Hospital (Milan) with flu-like symptoms or acute respiratory failure (aRF) tested per protocol for SARS-CoV-2, RSV, Influenza A (InvA) during the 2022-2023 autumn/winter season. Clinical characteristics and patients' outcomes were registered. Respiratory failure, need for respiratory support, shock, sepsis or in-hospital death defined severe disease.
    Main findings: The analysis included 717 patients (65.1% negative swab, 14.1% InvA, 8.5% RSV, 8.6% SARS-CoV-2, 3.6% other viruses). Compared with the study cohort, RSV patients had the highest occurrence of aRF (62.7%) and severe disease (70.5%); mortality was similar to InvA (6.6% vs 5.9%, p = 0.874). Compared with InvA patients, RSV patients were older (p = 0.009), had higher Charlson index (p = 0.001), higher prevalence of chronic heart failure (p = 0.001) and were more frequently on ICS (p = 0.026) and immunosuppressants (p = 0.018). Heart failure [OR (95%CI):3.286 (1.031-10.835); p = 0.041], chronic exposure to ICS [OR (95%CI):2.377 (1.254-4.505); p = 0.008] and immunosuppressants [OR (95%CI):3.661 (1.246-10.754); p = 0.018] predicted RSV infection. Glycaemia ≥120 mg/dL [OR (95%CI):5.839 (1.155-29.519); p = 0.033], leucocytes ≥8000 cells/μL [OR (95%CI):5.929 (1.090-32.268); p = 0.039], and past/active smoking [OR (95%CI):7.347 (1.301-41.500); p = 0.024] predicted severe RSV disease.
    Conclusions: RSV infection is associated with significant mortality and morbidity. Preventive strategies for RSV infection such as vaccination are highly warranted, especially in older patients with cardiovascular and chronic respiratory conditions.
    MeSH term(s) Humans ; Aged ; Cohort Studies ; Retrospective Studies ; Hospital Mortality ; Respiratory Syncytial Virus, Human ; Respiratory Syncytial Virus Infections/complications ; Respiratory Syncytial Virus Infections/epidemiology ; Influenza, Human/complications ; Influenza, Human/epidemiology ; Heart Failure/epidemiology ; Respiratory Distress Syndrome ; Risk Factors ; Emergency Service, Hospital ; Respiratory Insufficiency/epidemiology ; Immunosuppressive Agents
    Chemical Substances Immunosuppressive Agents
    Language English
    Publishing date 2023-09-06
    Publishing country England
    Document type Journal Article
    ZDB-ID 1003348-8
    ISSN 1532-3064 ; 0954-6111
    ISSN (online) 1532-3064
    ISSN 0954-6111
    DOI 10.1016/j.rmed.2023.107404
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Pediatric Lyme Disease in Northern Italy: An 18-Year Single-Center Case Series.

    Forlanini, Federica / Di Tonno, Raffaella / Caiazzo, Roberta / David, Daniela / Valentino, Maria Sole / Rimoldi, Sara Giordana / Zuccotti, Gian Vincenzo / Trevisan, Giusto / Basile, Francesca Wanda / Giacomet, Vania

    Microorganisms

    2024  Volume 12, Issue 3

    Abstract: Tracing the profile of pediatric Lyme borreliosis (LB) in Europe is difficult due to the interregional variation in its incidence and lack in notifications. Moreover, the identification of LB can be challenging. This study is an 18-year case series of ... ...

    Abstract Tracing the profile of pediatric Lyme borreliosis (LB) in Europe is difficult due to the interregional variation in its incidence and lack in notifications. Moreover, the identification of LB can be challenging. This study is an 18-year case series of 130 children and adolescents aged under 18 years referred to the Pediatric Infectious Diseases Unit at L. Sacco Hospital, Milan, with suspicion of LB, between January 2005 and July 2023. The routine serological workup consisted of a two-step process: an initial screening test followed by Western blot (WB). Forty-four (34%) patients were diagnosed with LB. The median age was six years, and 45% were females. Of the children with erythema migrans (EM), 33 (57%) were confirmed as having true EM, and, of these, 4 (12%) were atypical. Ten (23%) patients had early disseminated/late diseases, including facial nerve palsy (
    Language English
    Publishing date 2024-02-23
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2720891-6
    ISSN 2076-2607
    ISSN 2076-2607
    DOI 10.3390/microorganisms12030455
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: First imported case of Candida auris infection in Milan, Italy: genomic characterisation.

    Rimoldi, Sara Giordana / Nodari, Riccardo / Rizzo, Alberto / Tamoni, Alessandro / Longobardi, Concetta / Pagani, Cristina / Grosso, Silvia / Salari, Federica / Galimberti, Laura / Olivieri, Pietro / Rizzardini, Giuliano / Catena, Emanuele / Antinori, Spinello / Comandatore, Francesco / Castelli, Antonio / Gismondo, Maria Rita

    Infection

    2024  

    Abstract: Purpose: Candida auris, an emerging multidrug-resistant yeast, has been reported worldwide. In Italy, the first case was reported in 2019. We describe the first case of C. auris, imported from Greece, in Milan, using whole genome sequencing to ... ...

    Abstract Purpose: Candida auris, an emerging multidrug-resistant yeast, has been reported worldwide. In Italy, the first case was reported in 2019. We describe the first case of C. auris, imported from Greece, in Milan, using whole genome sequencing to characterise mutations associated with antifungal resistance.
    Case presentation: On October 2022 an 80-year-old Italian man was hospitalised in Greece. In the absence of clinical improvement, the patient was transferred to our hospital, in Italy, where blood culture resulted positive for C. auris. Despite therapy, the patient died of septic shock. In a phylogenetic analysis the genome was assigned to Clade I with strains from Kenya, United Arab Emirates and India. D1/D2 region resulted identical to a Greek strain, as for many other strains from different World regions, highlighting the diffusion of this strain.
    Conclusion: Importation of C. auris from abroad has been previously described. We report the first case of C. auris imported into Italy from Greece, according to phylogenetic analysis. This case reinforces the need for monitoring critically ill hospitalised patients also for fungi and addresses the need for the standardisation of susceptibility testing and strategies for diagnosis and therapy.
    Language English
    Publishing date 2024-04-01
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 185104-4
    ISSN 1439-0973 ; 0300-8126 ; 0173-2129
    ISSN (online) 1439-0973
    ISSN 0300-8126 ; 0173-2129
    DOI 10.1007/s15010-024-02232-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Genetic barriers more than environmental associations explain Serratia marcescens population structure.

    Sterzi, Lodovico / Nodari, Riccardo / Di Marco, Federico / Ferrando, Maria Laura / Saluzzo, Francesca / Spitaleri, Andrea / Allahverdi, Hamed / Papaleo, Stella / Panelli, Simona / Rimoldi, Sara Giordana / Batisti Biffignandi, Gherard / Corbella, Marta / Cavallero, Annalisa / Prati, Paola / Farina, Claudio / Cirillo, Daniela Maria / Zuccotti, Gianvincenzo / Bandi, Claudio / Comandatore, Francesco

    Communications biology

    2024  Volume 7, Issue 1, Page(s) 468

    Abstract: Bacterial species often comprise well-separated lineages, likely emerged and maintained by genetic isolation and/or ecological divergence. How these two evolutionary actors interact in the shaping of bacterial population structure is currently not fully ... ...

    Abstract Bacterial species often comprise well-separated lineages, likely emerged and maintained by genetic isolation and/or ecological divergence. How these two evolutionary actors interact in the shaping of bacterial population structure is currently not fully understood. In this study, we investigate the genetic and ecological drivers underlying the evolution of Serratia marcescens, an opportunistic pathogen with high genomic flexibility and able to colonise diverse environments. Comparative genomic analyses reveal a population structure composed of five deeply-demarcated genetic clusters with open pan-genome but limited inter-cluster gene flow, partially explained by Restriction-Modification (R-M) systems incompatibility. Furthermore, a large-scale research on hundred-thousands metagenomic datasets reveals only a partial habitat separation of the clusters. Globally, two clusters only show a separate gene composition coherent with ecological adaptations. These results suggest that genetic isolation has preceded ecological adaptations in the shaping of the species diversity, an evolutionary scenario coherent with the Evolutionary Extended Synthesis.
    MeSH term(s) Serratia marcescens/genetics ; Genetic Variation ; Ecosystem ; Gene Flow ; Genomics
    Language English
    Publishing date 2024-04-17
    Publishing country England
    Document type Journal Article
    ISSN 2399-3642
    ISSN (online) 2399-3642
    DOI 10.1038/s42003-024-06069-w
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Traditional Cultures versus Next Generation Sequencing for Suspected Orthopedic Infection: Experience Gained from a Reference Centre.

    Rimoldi, Sara Giordana / Brioschi, Davide / Curreli, Daniele / Salari, Federica / Pagani, Cristina / Tamoni, Alessandro / Longobardi, Concetta / Bosari, Raffaella / Rizzo, Alberto / Landonio, Simona / Coen, Massimo / Passerini, Matteo / Gismondo, Maria Rita / Gori, Andrea / Manzotti, Alfonso

    Antibiotics (Basel, Switzerland)

    2023  Volume 12, Issue 11

    Abstract: Background) The diagnosis and the antimicrobial treatment of orthopedic infection are challenging, especially in cases with culture-negative results. New molecular methods, such as next-generation sequencing (NGS), promise to overcome some limitations ... ...

    Abstract (Background) The diagnosis and the antimicrobial treatment of orthopedic infection are challenging, especially in cases with culture-negative results. New molecular methods, such as next-generation sequencing (NGS), promise to overcome some limitations of the standard culture, such as the detection of difficult-to-grow bacteria. However, data are scarce regarding the impact of molecular techniques in real-life scenarios. (Methods) We included cases of suspected orthopedic infection treated with surgery from May 2021 to September 2023. We combined traditional cultures with NGS. For NGS, we performed a metagenomic analysis of ribosomal 16s, and we queried dedicated taxonomic libraries to identify the species. To avoid false positive results, we set a cut-off of 1000 counts of the percentage of frequency of reads. (Results) We included 49 patients in our study. Our results show the presence of bacteria in 36/49 (73%) and 29/49 (59%) cases studied with NGS and traditional cultures, respectively. The concordance rate was 61%. Among the 19/49 discordant cases, in 11/19 cases, cultures were negative and NGS positive; in 4/19, cultures were positive and NGS negative; and in the remaining 4/19, different species were detected by traditional cultures and NGS. (Conclusions) Difficult-to-grow microorganisms, such as slow-growing anaerobic bacteria, were better detected by NGS compared to traditional culture in our study. However, more data to distinguish between true pathogens and contaminants are needed. NGS can be an additional tool to be used for the diagnosis of orthopedic infections and the choice of appropriate antimicrobial therapy.
    Language English
    Publishing date 2023-11-03
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2681345-2
    ISSN 2079-6382
    ISSN 2079-6382
    DOI 10.3390/antibiotics12111588
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: SARS-CoV-2 in the knee joint: a cadaver study.

    Grassi, Miriam / Giorgi, Valeria / Nebuloni, Manuela / Zerbi, Pietro / Gismondo, Maria Rita / Salaffi, Fausto / Sarzi-Puttini, Piercarlo / Rimoldi, Sara Giordana / Manzotti, Alfonso

    Clinical and experimental rheumatology

    2021  Volume 40, Issue 3, Page(s) 608–612

    Abstract: Objectives: Despite the considerable research efforts being made to learn more about COVID-19, little is known about the presence of SARS-CoV-2 genetic material in biological fluids other than respiratory droplets, blood, and feces. The aim of this post- ...

    Abstract Objectives: Despite the considerable research efforts being made to learn more about COVID-19, little is known about the presence of SARS-CoV-2 genetic material in biological fluids other than respiratory droplets, blood, and feces. The aim of this post-mortem study was to assess the presence of SARS-CoV-2 RNA in the knee synovial fluid, synovial tissue, and bone tissue of COVID-19 patients in order to discover whether the joint is a possible route of transmission during orthopaedic surgical procedures, and clarify the possible role of SARS-CoV-2 as a directly arthritogenic virus.
    Methods: Post-mortem synovial fluid, synovial tissue and bone tissue samples were collected from the knees of five patients who died of COVID-19 in our hospital between September and October 2020, and analysed for the presence of SARS-CoV-2 using a commercial real-time polymerase chain reaction (RT-PCR) panel. Quantitative RT-PCR was used to test post-mortem nasopharyngeal swabs of all of the patients.
    Results: No SARS-CoV-2 RNA was detected in any of the knee samples, despite the positivity of the throat swab.
    Conclusions: Our findings indicate that SARS-CoV-2 was not detected in knee synovial fluid, synovial membrane or bone. This makes it unlikely that these are potential sources of contagion, and suggests that SARS-CoV-2 is not directly arthritogenic.
    MeSH term(s) COVID-19 ; Cadaver ; Humans ; Knee Joint ; RNA, Viral/genetics ; SARS-CoV-2
    Chemical Substances RNA, Viral
    Language English
    Publishing date 2021-10-13
    Publishing country Italy
    Document type Journal Article
    ZDB-ID 605886-3
    ISSN 1593-098X ; 0392-856X
    ISSN (online) 1593-098X
    ISSN 0392-856X
    DOI 10.55563/clinexprheumatol/t1m4y2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: A case of severe cholera imported from Bangladesh to Italy, 2017.

    Ricaboni, Davide / Bozzoni, Marina / Riario Sforza, Gian Galeazzo / Rimoldi, Sara Giordana / Antinori, Spinello

    Travel medicine and infectious disease

    2019  Volume 29, Page(s) 60–62

    MeSH term(s) Adult ; Bangladesh/epidemiology ; Cholera/diagnosis ; Cholera/epidemiology ; Cholera/therapy ; Communicable Diseases, Imported/epidemiology ; Humans ; Italy/epidemiology ; Male ; Travel ; Vibrio cholerae/isolation & purification
    Language English
    Publishing date 2019-05-02
    Publishing country Netherlands
    Document type Case Reports ; Letter
    ZDB-ID 2170891-5
    ISSN 1873-0442 ; 1477-8939
    ISSN (online) 1873-0442
    ISSN 1477-8939
    DOI 10.1016/j.tmaid.2019.05.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Cultivation and sequencing-free protocol for

    Alvaro, Alessandro / Piazza, Aurora / Papaleo, Stella / Perini, Matteo / Pasala, Ajay Ratan / Panelli, Simona / Nardi, Tiago / Nodari, Riccardo / Sterzi, Lodovico / Pagani, Cristina / Merla, Cristina / Castelli, Daniele / Olivieri, Emanuela / Bracco, Silvia / Ferrando, Maria Laura / Saluzzo, Francesca / Rimoldi, Sara Giordana / Corbella, Marta / Cavallero, Annalisa /
    Prati, Paola / Farina, Claudio / Cirillo, Daniela Maria / Zuccotti, Gianvincenzo / Comandatore, Francesco

    iScience

    2024  Volume 27, Issue 4, Page(s) 109402

    Abstract: ... Serratia ... ...

    Abstract Serratia marcescens
    Language English
    Publishing date 2024-03-01
    Publishing country United States
    Document type Journal Article
    ISSN 2589-0042
    ISSN (online) 2589-0042
    DOI 10.1016/j.isci.2024.109402
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  9. Article: Bloodstream Infections in Intensive Care Unit during Four Consecutive SARS-CoV-2 Pandemic Waves.

    Pozza, Giacomo / Casalini, Giacomo / Ciubotariu, Cosmin Lucian / Giacomelli, Andrea / Galimberti, Miriam / Zacheo, Martina / Rabbione, Andrea / Pieruzzi, Margherita / Oreni, Letizia / Galimberti, Laura / Colombo, Riccardo / Rizzardini, Giuliano / Pagani, Cristina / Rimoldi, Sara Giordana / Bonazzetti, Cecilia / Ridolfo, Anna Lisa / Antinori, Spinello

    Antibiotics (Basel, Switzerland)

    2023  Volume 12, Issue 9

    Abstract: Critically ill COVID-19 patients are at an increased risk of bloodstream infections (BSIs). We performed a retrospective observational single-center study on COVID-19 patients admitted to intensive care unit (ICU) to assess the incidence of BSIs in four ... ...

    Abstract Critically ill COVID-19 patients are at an increased risk of bloodstream infections (BSIs). We performed a retrospective observational single-center study on COVID-19 patients admitted to intensive care unit (ICU) to assess the incidence of BSIs in four consecutive periods: 21 February-31 July 2020 (W1), 1 August 2020-31 January 2021 (W2), 1 February-30 September 2021 (W3) and 1 October 2021 and 30 April 2022 (W4). BSIs that occurred 48 h after ICU admission were included. The crude incidence of BSIs was estimated by means of Poisson distribution normalized to 1000 patient-days. A total of 404 critically ill COVID-19 patients were admitted to ICU, of whom 284 (61%) developed at least one episode of BSI with an overall crude incidence of 87 events every 1000 patient-days (95% CI 77-98) without a significant difference in consecutive epidemic periods (
    Language English
    Publishing date 2023-09-14
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2681345-2
    ISSN 2079-6382
    ISSN 2079-6382
    DOI 10.3390/antibiotics12091448
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  10. Article: The history of Lyme disease in Italy and its spread in the Italian territory.

    Trevisan, Giusto / Ruscio, Maurizio / Cinco, Marina / Nan, Katiuscia / Forgione, Patrizia / Di Meo, Nicola / Tranchini, Paolo / Nacca, Massimo / Trincone, Silvana / Rimoldi, Sara Giordana / Giacomet, Vania / Ricci, Michela / Melandri, Davide / Artioli, Stefania / Monteforte, Patrizia / Stinco, Giuseppe / Bonin, Serena

    Frontiers in pharmacology

    2023  Volume 14, Page(s) 1128142

    Abstract: Lyme borreliosis (LB) is the most common vector-borne zoonotic inflammatory disease in the Northern Hemisphere. In Italy, the first case was diagnosed in 1985 in a woman in Liguria, while the second, in 1986 in Friuli-Venezia Giulia, documenting the ... ...

    Abstract Lyme borreliosis (LB) is the most common vector-borne zoonotic inflammatory disease in the Northern Hemisphere. In Italy, the first case was diagnosed in 1985 in a woman in Liguria, while the second, in 1986 in Friuli-Venezia Giulia, documenting the infection in northern Italy. Both diagnoses were confirmed by serological assessment by an indirect immunofluorescence (IFI) technique.
    Language English
    Publishing date 2023-06-16
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2587355-6
    ISSN 1663-9812
    ISSN 1663-9812
    DOI 10.3389/fphar.2023.1128142
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