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Article ; Online: Genetic diversity of adenovirus in neotropical bats from Brazil.

Rizotto, Laís Santos / Bueno, Larissa Mayumi / Corrêa, Thaís Camilo / Dos Santos de Moraes, Maria Vitória / de Oliveira Viana, Amanda / Silva, Laura Morais Nascimento / Benassi, Julia Cristina / Scagion, Guilherme Pereira / Lopes, Bruna Larotonda Telezynski / de Assis, Isabela Barbosa / Ometto, Tatiana / Dorlass, Erick Gustavo / Cunha, Irineu Noberto / Melinski, Ramiro Dário / Leitão, Gabriel Lins / Rodrigues, Roberta Costa / da Silva Pereira, Iolanda Maria / D'ark Nunes Dos Santos, Lilia / Hingst-Zaher, Erika /

de Azevedo Junior, Severino Mendes / Junior, Wallace Rodrigues Telino / de Araújo, Jansen / Durigon, Edison Luiz / Arns, Clarice Weis / Ferreira, Helena Lage

Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology

2023 Volume 54, Issue 4, Page(s) 3221–3230

Abstract: Bats can harbor a diversity of viruses, such as adenovirus. Ten different species of bat adenoviruses (BtAdV A to J) have been previous described worlwide. In Brazil, BtAdV was described in three species of phyllostomid species: Artibeus lituratus, ... ...

Abstract	Bats can harbor a diversity of viruses, such as adenovirus. Ten different species of bat adenoviruses (BtAdV A to J) have been previous described worlwide. In Brazil, BtAdV was described in three species of phyllostomid species: Artibeus lituratus, Desmodus rotundus, and Sturnira lilium. There are around 180 bat species in Brazil, with 67% inhabiting the Atlantic Forest, with few information about the circulation of BtAdV in this biome. We aimed to describe the molecular detection and the phylogenetic characterization and suggest a classification of BtAdVs circulating in bats from the Brazilian Atlantic Forest. We collected 382 oral and rectal swabs from 208 bats between 2014-2015 and 2020-2021 from São Paulo, Pernambuco, and Santa Catarina Brazilian states. The adenovirus detection was done by a nested PCR targeting the DNA polymerase gene, and all positive samples were sequenced by the Sanger method. The phylogenetic analyses were based on the amino acid sequences using the MEGA 7 and BEAST software. We obtained 16 positive animals (detection rate 7.7%) belonging to seven bat species: Artibeus lituratus, Carollia perspicillata, Sturnira lilium, Molossus molossus, and the first record of Phyllostomus discolor, Eptesicus diminutus, and Myotis riparius. The phylogenetic analysis based on partial amino acid sequences showed that all obtained AdV sequences belong to the Mastadenovirus genus. We observed a high genetic diversity of BtAdV and identified eleven potential BtAdV species circulating in Brazil (BtAdV K to U). Our results contribute to the epidemiological surveillance of adenovirus, increasing the knowledge about the viral diversity and the distribution of AdV in bats from the Atlantic Forest.
MeSH term(s)	Animals ; Adenoviridae/genetics ; Brazil ; Chiroptera ; Phylogeny ; Adenoviridae Infections ; Mastadenovirus ; Genetic Variation
Language	English
Publishing date	2023-08-31
Publishing country	Brazil
Document type	Journal Article
ZDB-ID	2017175-4
ISSN	1678-4405 ; 1517-8382
ISSN (online)	1678-4405
ISSN	1517-8382
DOI	10.1007/s42770-023-01109-9
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: High genetic diversity of alphacoronaviruses in bat species (Mammalia: Chiroptera) from the Atlantic Forest in Brazil

Bueno, Larissa Mayumi / Rizotto, Laís Santos / Viana, Amanda de Oliveira / Silva, Laura Morais Nascimento / de Moraes, Maria Vitória dos Santos / Benassi, Julia Cristina / Scagion, Guilherme Pereira / Dorlass, Erick Gustavo / Lopes, Bruna Larotonda Telezynski / Cunha, Irineu Noberto / Melinski, Ramiro / de Alvarenga, Igor Ferreira / Leitão, Gabriel Lins / Rodrigues, Roberta Costa / Pereira, Iolanda Maria da Silva / dos Santos, Lilia D'ark Nunes / Fisch, Fabiane / Rocha, Alana Drielle / Port, Dagoberto /

Pereira, Gabriela Stahelin / Greatti, Alessandra / Barnabé, Ana Caroline de Souza / Tsukamoto, Junko / Hingst‐Zaher, Erika / de Azevedo, Severino Mendes, Jr / Telino, Wallace Rodrigues, Jr / Branco, Joaquim Olinto / Ometto, Tatiana / de Araujo, Jansen / Arns, Clarice Weis / Ferreira, Helena Lage / Durigon, Edison Luiz

Transboundary and emerging diseases. 2022 Sept., v. 69, no. 5

2022

Abstract: Bat coronaviruses (Bat‐CoVs) represent around 35% of all virus genomes described in bats. Brazil has one of the highest mammal species diversity, with 181 species of bats described so far. However, few Bat‐CoV surveillance programmes were carried out in ... ...

Abstract	Bat coronaviruses (Bat‐CoVs) represent around 35% of all virus genomes described in bats. Brazil has one of the highest mammal species diversity, with 181 species of bats described so far. However, few Bat‐CoV surveillance programmes were carried out in the country. Thus, our aim was to jevaluate the Bat‐CoV diversity in the Atlantic Forest, the second biome with the highest number of bat species in Brazil. We analysed 456 oral and rectal swabs and 22 tissue samples from Atlantic Forest bats, detecting Alphacoronavirus in 44 swab samples (9.6%) targeting the RdRp gene from seven different bat species, three of which have never been described as Bat‐CoV hosts. Phylogenetic analysis of the amino acid (aa) sequences coding the RdRp gene grouped the sequences obtained in our study with Bat‐CoV previously detected in identical or congeneric bat species, belonging to four subgenera, with high aa identity (over 90%). The RdRp gene was also detected in three tissue samples from Diphylla ecaudata and Sturnira lilium, and the partial S gene was successfully sequenced in five tissues and swab samples of D. ecaudata. The phylogenetic analysis based on the partial S gene obtained here grouped the sequence of D. ecaudata with CoV from Desmodus rotundus previously detected in Peru and Brazil, belonging to the Amalacovirus subgenus, with aa identity ranging from 73.6% to 88.8%. Our data reinforce the wide distribution of Coronaviruses in bats from Brazil and the novelty of three bats species as Bat‐CoV hosts and the co‐circulation of four Alphacoronavirus subgenera in Brazil.
Keywords	Alphacoronavirus ; Desmodus ; amino acids ; ecosystems ; forests ; genes ; genetic variation ; mammals ; monitoring ; phylogeny ; species diversity ; viruses ; Brazil ; Peru
Language	English
Dates of publication	2022-09
Size	p. e2863-e2875.
Publishing place	John Wiley & Sons, Ltd
Document type	Article
Note	JOURNAL ARTICLE
ZDB-ID	2414822-2
ISSN	1865-1682 ; 1865-1674
ISSN (online)	1865-1682
ISSN	1865-1674
DOI	10.1111/tbed.14636
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Divergent coronaviruses detected in wild birds in Brazil, including a central park in São Paulo.

Barbosa, Carla M / Durigon, Edison L / Thomazelli, Luciano M / Ometto, Tatiana / Marcatti, Roberta / Nardi, Marcello Shiavo / de Aguiar, Daniel M / Pinho, João Batista / Petry, Maria Virginia / Neto, Isaac Simão / Serafini, Patrícia / Rodrigues, Roberta Costa / de Azevedo Junior, Severino Mendes / Góes, Luiz Gustavo B / de Araujo, Jansen

Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology

2019 Volume 50, Issue 2, Page(s) 547–556

Abstract: Coronaviruses are single-stranded positive-sense RNA viruses associated with important avian diseases. Their relatively high rates of mutation and recombination frequencies allow them to adapt to new hosts and ecological niches. Although Brazil has 18% ... ...

Abstract	Coronaviruses are single-stranded positive-sense RNA viruses associated with important avian diseases. Their relatively high rates of mutation and recombination frequencies allow them to adapt to new hosts and ecological niches. Although Brazil has 18% of global avian species diversity, studies regarding the presence of avian viral diseases in wild birds in South America are scarce. In this study, we performed a retrospective analysis of the presence of CoVs in 746 wild birds. Oropharyngeal and cloacal swabs were obtained and placed together in vials containing VTM transport medium collected in different regions of Brazil between 2006 and 2013. Screening for viral nucleic acid was performed using conventional RT-PCR and pancoronavirus nested PCR. Positive samples were characterized by partial sequencing of the RNA-dependent RNA polymerase (RdRp) gene, and ensuing phylogenetic analysis was performed to investigate the association between virus epidemiology and bird migration routes. Coronavirus RNA were detected and sequenced from six samples, in which three were related to gammacoronaviruses group and the other three to deltacoronavirus group. Our study documents the presence of CoVs related to avian gamma- and deltacoronaviruses circulating in both urban- and poultry-farm regions of Brazil, implicating wild birds as potential carriers of CoVs which may represent a risk to poultry farms and public health in Brazil.
MeSH term(s)	Animals ; Animals, Wild/virology ; Base Sequence ; Bird Diseases/epidemiology ; Bird Diseases/virology ; Birds/virology ; Brazil/epidemiology ; Coronavirus/genetics ; Coronavirus/isolation & purification ; Coronavirus Infections/epidemiology ; Disease Reservoirs/virology ; Gammacoronavirus/genetics ; Gammacoronavirus/isolation & purification ; Phylogeny ; RNA, Viral/genetics ; RNA-Dependent RNA Polymerase/genetics ; Retrospective Studies
Chemical Substances	RNA, Viral ; RNA-Dependent RNA Polymerase (EC 2.7.7.48)
Keywords	covid19
Language	English
Publishing date	2019-03-15
Publishing country	Brazil
Document type	Journal Article
ZDB-ID	2017175-4
ISSN	1678-4405 ; 1517-8382
ISSN (online)	1678-4405
ISSN	1517-8382
DOI	10.1007/s42770-019-00065-7
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: High genetic diversity of alphacoronaviruses in bat species (Mammalia: Chiroptera) from the Atlantic Forest in Brazil.

Bueno, Larissa Mayumi / Rizotto, Laís Santos / Viana, Amanda de Oliveira / Silva, Laura Morais Nascimento / de Moraes, Maria Vitória Dos Santos / Benassi, Julia Cristina / Scagion, Guilherme Pereira / Dorlass, Erick Gustavo / Lopes, Bruna Larotonda Telezynski / Cunha, Irineu Noberto / Melinski, Ramiro / de Alvarenga, Igor Ferreira / Leitão, Gabriel Lins / Rodrigues, Roberta Costa / Pereira, Iolanda Maria da Silva / Dos Santos, Lilia D'ark Nunes / Fisch, Fabiane / Rocha, Alana Drielle / Port, Dagoberto /

Pereira, Gabriela Stahelin / Greatti, Alessandra / Barnabé, Ana Caroline de Souza / Tsukamoto, Junko / Hingst-Zaher, Erika / de Azevedo, Severino Mendes / Telino, Wallace Rodrigues / Branco, Joaquim Olinto / Ometto, Tatiana / de Araujo, Jansen / Arns, Clarice Weis / Ferreira, Helena Lage / Durigon, Edison Luiz

Transboundary and emerging diseases

2022 Volume 69, Issue 5, Page(s) e2863–e2875

Abstract: Bat coronaviruses (Bat-CoVs) represent around 35% of all virus genomes described in bats. Brazil has one of the highest mammal species diversity, with 181 species of bats described so far. However, few Bat-CoV surveillance programmes were carried out in ... ...

Abstract	Bat coronaviruses (Bat-CoVs) represent around 35% of all virus genomes described in bats. Brazil has one of the highest mammal species diversity, with 181 species of bats described so far. However, few Bat-CoV surveillance programmes were carried out in the country. Thus, our aim was to jevaluate the Bat-CoV diversity in the Atlantic Forest, the second biome with the highest number of bat species in Brazil. We analysed 456 oral and rectal swabs and 22 tissue samples from Atlantic Forest bats, detecting Alphacoronavirus in 44 swab samples (9.6%) targeting the RdRp gene from seven different bat species, three of which have never been described as Bat-CoV hosts. Phylogenetic analysis of the amino acid (aa) sequences coding the RdRp gene grouped the sequences obtained in our study with Bat-CoV previously detected in identical or congeneric bat species, belonging to four subgenera, with high aa identity (over 90%). The RdRp gene was also detected in three tissue samples from Diphylla ecaudata and Sturnira lilium, and the partial S gene was successfully sequenced in five tissues and swab samples of D. ecaudata. The phylogenetic analysis based on the partial S gene obtained here grouped the sequence of D. ecaudata with CoV from Desmodus rotundus previously detected in Peru and Brazil, belonging to the Amalacovirus subgenus, with aa identity ranging from 73.6% to 88.8%. Our data reinforce the wide distribution of Coronaviruses in bats from Brazil and the novelty of three bats species as Bat-CoV hosts and the co-circulation of four Alphacoronavirus subgenera in Brazil.
MeSH term(s)	Alphacoronavirus/genetics ; Amino Acids/genetics ; Animals ; Brazil/epidemiology ; Chiroptera ; Coronavirus/genetics ; Coronavirus Infections/veterinary ; Forests ; Genetic Variation ; Genome, Viral ; Phylogeny ; RNA-Dependent RNA Polymerase
Chemical Substances	Amino Acids ; RNA-Dependent RNA Polymerase (EC 2.7.7.48)
Language	English
Publishing date	2022-07-12
Publishing country	Germany
Document type	Journal Article
ZDB-ID	2414822-2
ISSN	1865-1682 ; 1865-1674
ISSN (online)	1865-1682
ISSN	1865-1674
DOI	10.1111/tbed.14636
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: ATLANTIC BIRD TRAITS: a data set of bird morphological traits from the Atlantic forests of South America

Rodrigues, Rodolpho Credo / Hasui, Érica / Assis, Julia Camara / Pena, João Carlos Castro / Muylaert, Renata L / Tonetti, Vinicius Rodrigues / Martello, Felipe / Regolin, André Luis / Costa, Thiago Vernaschi Vieira da / Pichorim, Mauro / Carrano, Eduardo / Lopes, Leonardo Esteves / de Vasconcelos, Marcelo Ferreira / Fontana, Carla Suertegaray / Roos, Andrei Langeloh / Gonçalves, Fernando / Banks‐Leite, Cristina / Cavarzere, Vagner / Efe, Marcio Amorim /

Alves, Maria Alice S / Uezu, Alexandre / Metzger, Jean Paul / de Tarso Zuquim de Antas, Paulo / de Barros Ferraz, Katia Maria Paschoaletto Micchi / Calsavara, Larissa Corsini / Bispo, Arthur Angelo / Araujo, Helder F. P / Duca, Charles / Piratelli, Augusto João / Naka, Luciano N / Dias, Rafael Antunes / Gatto, Cassiano A. F. R / Vallejos, Marcelo Alejandro Villegas / Menezes, Gregório dos Reis / Bugoni, Leandro / Rajão, Henrique / Zocche, Jairo José / Willrich, Guilherme / Silva, Elsimar Silveira da / Manica, Lilian Tonelli / de Camargo Guaraldo, André / Althmann, Giulyana / Serafini, Patricia Pereira / Francisco, Mercival Roberto / Lugarini, Camile / Machado, Caio Graco / Marques‐Santos, Fernando / Bobato, Rafaela / de Souza, Elivan Arantes / Donatelli, Reginaldo José / Ferreira, Carolina Demetrio / Morante‐Filho, José Carlos / Paes‐Macarrão, Natalia Dantas / Macarrão, Arthur / Lima, Marcos Robalinho / Jacoboski, Lucilene Inês / Candia‐Gallardo, Carlos / Alegre, Vanesa Bejarano / Jahn, Alex E / de Camargo Barbosa, Karlla Vanessa / Cestari, Cesar / Silva, José Nilton da / Silveira, Natalia Stefanini Da / Crestani, Ana Cristina Vara / Petronetto, Adeliane Peterle / Bovo, Alex Augusto Abreu / Viana, Anderson Durão / Araujo, Andrea Cardoso / Santos, Andressa Hartuiq dos / Amaral, Andreza Clarinda Araújo do / Ferreira, Ariane / Vieira‐Filho, Arnaldo Honorato / Ribeiro, Bianca Costa / Missagia, Caio C. C / Bosenbecker, Camila / Medolago, Cesar Augusto Bronzato / Espínola, Cid Rodrigo Rodriguez / Faxina, Claudenice / Nunes, Cristiane Estrela Campodonio / Prates, Cristine / Luz, Daniela Tomasio Apolinario da / Moreno, Daniele Janina / Mariz, Daniele / Faria, Deborah / Meyer, Douglas / Doná, Eder Afonso / Alexandrino, Eduardo Roberto / Fischer, Erich / Girardi, Fabiane / Giese, Felipe Borba / Shibuya, Felipe Leonardo Santos / Faria, Fernando Azevedo / de Farias, Fernando Bittencourt / de Lima Favaro, Fernando / Freitas, Fernando José Ferneda / Chaves, Flávia G / Las‐Casas, Flor Maria Guedes / Rosa, Gabriel L. M / Torre, Gabriel Massaccesi De La / Bochio, Gabriela Menezes / Bonetti, Giselle Evelise / Kohler, Glauco / Toledo‐Lima, Guilherme Santos / Plucenio, Gustavo Piletti / Menezes, Ícaro / Torres, Ingrid Maria Denóbile / Provinciato, Ivan Celso Carvalho / Viana, Ivan Réus / Roper, James Joseph / Persegona, Jaqueline Evelyn / Barcik, Jean Júnior / Martins‐Silva, Jimi / Just, João Paulo Gava / Tavares‐Damasceno, João Paulo / de Almeida Ferreira, João Ricardo / Rosoni, Jonas Rafael Rodrigues / Falcon, José Eduardo Teixeira / Schaedler, Laura Maria / Mathias, Leonardo Brioschi / Deconto, Leonardo Rafael / Rodrigues, Licléia da Cruz / Meyer, Marcela Afonso P / Repenning, Márcio / Melo, Marcos Antônio / de Carvalho, Maria Amélia Santos / Rodrigues, Marcos / Nunes, Maria Flavia Conti / Ogrzewalska, Maria Halina / Gonçalves, Mariana Lopes / Vecchi, Maurício B / Bettio, Maurício / Baptista, Michelle Noronha da Matta / Arantes, Murilo Sérgio / Ruiz, Nicolás Luciano / de Andrade, Paulo Guilherme Bisetto / Ribeiro, Pedro Henrique Lima / Junior, Pedro Manoel Galetti / Macario, Phoeve / de Oliveira Fratoni, Rafael / Meurer, Rafael / Saint‐Clair, Rafael S / Romagna, Rafael Spilere / Lacerda, Raquel Caroline Alves / Cerboncini, Ricardo Augusto Serpa / Lyra, Ricardo Brioschi / Lau, Ricardo / Rodrigues, Roberta Costa / Faria, Rogério Rodrigues / Laps, Rudi Ricardo / Althoff, Sérgio Luiz / de Jesus, Shayana / Namba, Sumiko / Braga, Talita Vieira / Molin, Tamara / Câmara, Thanyria P. França / Enedino, Thayz Rodrigues / Wischhoff, Uschi / de Oliveira, Vanessa Cristina / Leandro‐Silva, Victor / Araújo‐Lima, Vitor / de Oliveira Lunardi, Vitor / de Gusmão, Reginaldo Farias / de Souza Correia, Jozélia Maria / Gaspar, Lucas P / Fonseca, Renata Cristina Batista / Neto, Paulo Affonso Fonseca Pires / de Aquino, Ana Carla Medeiros Morato / de Camargo, Bruna Betagni / Cezila, Beatriz Azevedo / Costa, Leonardo Marques / Paolino, Roberta Montanheiro / Kanda, Claudia Zukeran / Monteiro, Erison C. S / Oshima, Júlia Emi F / Alves‐Eigenheer, Milene / Pizo, Marco Aurelio / Silveira, Luís F / Galetti, Mauro / Ribeiro, Milton Cezar

Ecology. 2019 June, v. 100, no. 6

2019

Abstract: Scientists have long been trying to understand why the Neotropical region holds the highest diversity of birds on Earth. Recently, there has been increased interest in morphological variation between and within species, and in how climate, topography, ... ...

Abstract	Scientists have long been trying to understand why the Neotropical region holds the highest diversity of birds on Earth. Recently, there has been increased interest in morphological variation between and within species, and in how climate, topography, and anthropogenic pressures may explain and affect phenotypic variation. Because morphological data are not always available for many species at the local or regional scale, we are limited in our understanding of intra‐ and interspecies spatial morphological variation. Here, we present the ATLANTIC BIRD TRAITS, a data set that includes measurements of up to 44 morphological traits in 67,197 bird records from 2,790 populations distributed throughout the Atlantic forests of South America. This data set comprises information, compiled over two centuries (1820–2018), for 711 bird species, which represent 80% of all known bird diversity in the Atlantic Forest. Among the most commonly reported traits are sex (n = 65,717), age (n = 63,852), body mass (n = 58,768), flight molt presence (n = 44,941), molt presence (n = 44,847), body molt presence (n = 44,606), tail length (n = 43,005), reproductive stage (n = 42,588), bill length (n = 37,409), body length (n = 28,394), right wing length (n = 21,950), tarsus length (n = 20,342), and wing length (n = 18,071). The most frequently recorded species are Chiroxiphia caudata (n = 1,837), Turdus albicollis (n = 1,658), Trichothraupis melanops (n = 1,468), Turdus leucomelas (n = 1,436), and Basileuterus culicivorus (n = 1,384). The species recorded in the greatest number of sampling localities are Basileuterus culicivorus (n = 243), Trichothraupis melanops (n = 242), Chiroxiphia caudata (n = 210), Platyrinchus mystaceus (n = 208), and Turdus rufiventris (n = 191). ATLANTIC BIRD TRAITS (ABT) is the most comprehensive data set on measurements of bird morphological traits found in a biodiversity hotspot; it provides data for basic and applied research at multiple scales, from individual to community, and from the local to the macroecological perspectives. No copyright or proprietary restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications or teaching and educational activities.
Keywords	Chiroxiphia caudata ; Neotropics ; Turdus ; applied research ; biodiversity ; birds ; body length ; data collection ; flight ; forests ; molting ; phenotypic variation ; tail ; topography ; South America
Language	English
Dates of publication	2019-06
Publishing place	John Wiley & Sons, Ltd
Document type	Article
Note	JOURNAL ARTICLE
ZDB-ID	1797-8
ISSN	0012-9658
ISSN	0012-9658
DOI	10.1002/ecy.2647
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: ATLANTIC BIRD TRAITS: a data set of bird morphological traits from the Atlantic forests of South America.

Rodrigues, Rodolpho Credo / Hasui, Érica / Assis, Julia Camara / Pena, João Carlos Castro / Muylaert, Renata L / Tonetti, Vinicius Rodrigues / Martello, Felipe / Regolin, André Luis / Costa, Thiago Vernaschi Vieira da / Pichorim, Mauro / Carrano, Eduardo / Lopes, Leonardo Esteves / de Vasconcelos, Marcelo Ferreira / Fontana, Carla Suertegaray / Roos, Andrei Langeloh / Gonçalves, Fernando / Banks-Leite, Cristina / Cavarzere, Vagner / Efe, Marcio Amorim /

Alves, Maria Alice S / Uezu, Alexandre / Metzger, Jean Paul / de Tarso Zuquim de Antas, Paulo / de Barros Ferraz, Katia Maria Paschoaletto Micchi / Calsavara, Larissa Corsini / Bispo, Arthur Angelo / Araujo, Helder F P / Duca, Charles / Piratelli, Augusto João / Naka, Luciano N / Dias, Rafael Antunes / Gatto, Cassiano A F R / Vallejos, Marcelo Alejandro Villegas / Menezes, Gregório Dos Reis / Bugoni, Leandro / Rajão, Henrique / Zocche, Jairo José / Willrich, Guilherme / Silva, Elsimar Silveira da / Manica, Lilian Tonelli / de Camargo Guaraldo, André / Althmann, Giulyana / Serafini, Patricia Pereira / Francisco, Mercival Roberto / Lugarini, Camile / Machado, Caio Graco / Marques-Santos, Fernando / Bobato, Rafaela / de Souza, Elivan Arantes / Donatelli, Reginaldo José / Ferreira, Carolina Demetrio / Morante-Filho, José Carlos / Paes-Macarrão, Natalia Dantas / Macarrão, Arthur / Lima, Marcos Robalinho / Jacoboski, Lucilene Inês / Candia-Gallardo, Carlos / Alegre, Vanesa Bejarano / Jahn, Alex E / de Camargo Barbosa, Karlla Vanessa / Cestari, Cesar / Silva, José Nilton da / Silveira, Natalia Stefanini Da / Crestani, Ana Cristina Vara / Petronetto, Adeliane Peterle / Bovo, Alex Augusto Abreu / Viana, Anderson Durão / Araujo, Andrea Cardoso / Santos, Andressa Hartuiq Dos / Amaral, Andreza Clarinda Araújo do / Ferreira, Ariane / Vieira-Filho, Arnaldo Honorato / Ribeiro, Bianca Costa / Missagia, Caio C C / Bosenbecker, Camila / Medolago, Cesar Augusto Bronzato / Espínola, Cid Rodrigo Rodriguez / Faxina, Claudenice / Nunes, Cristiane Estrela Campodonio / Prates, Cristine / Luz, Daniela Tomasio Apolinario da / Moreno, Daniele Janina / Mariz, Daniele / Faria, Deborah / Meyer, Douglas / Doná, Eder Afonso / Alexandrino, Eduardo Roberto / Fischer, Erich / Girardi, Fabiane / Giese, Felipe Borba / Shibuya, Felipe Leonardo Santos / Faria, Fernando Azevedo / de Farias, Fernando Bittencourt / de Lima Favaro, Fernando / Freitas, Fernando José Ferneda / Chaves, Flávia G / Las-Casas, Flor Maria Guedes / Rosa, Gabriel L M / Torre, Gabriel Massaccesi De La / Bochio, Gabriela Menezes / Bonetti, Giselle Evelise / Kohler, Glauco / Toledo-Lima, Guilherme Santos / Plucenio, Gustavo Piletti / Menezes, Ícaro / Torres, Ingrid Maria Denóbile / Provinciato, Ivan Celso Carvalho / Viana, Ivan Réus / Roper, James Joseph / Persegona, Jaqueline Evelyn / Barcik, Jean Júnior / Martins-Silva, Jimi / Just, João Paulo Gava / Tavares-Damasceno, João Paulo / de Almeida Ferreira, João Ricardo / Rosoni, Jonas Rafael Rodrigues / Falcon, José Eduardo Teixeira / Schaedler, Laura Maria / Mathias, Leonardo Brioschi / Deconto, Leonardo Rafael / Rodrigues, Licléia da Cruz / Meyer, Marcela Afonso P / Repenning, Márcio / Melo, Marcos Antônio / de Carvalho, Maria Amélia Santos / Rodrigues, Marcos / Nunes, Maria Flavia Conti / Ogrzewalska, Maria Halina / Gonçalves, Mariana Lopes / Vecchi, Maurício B / Bettio, Maurício / Baptista, Michelle Noronha da Matta / Arantes, Murilo Sérgio / Ruiz, Nicolás Luciano / de Andrade, Paulo Guilherme Bisetto / Ribeiro, Pedro Henrique Lima / Junior, Pedro Manoel Galetti / Macario, Phoeve / de Oliveira Fratoni, Rafael / Meurer, Rafael / Saint-Clair, Rafael S / Romagna, Rafael Spilere / Lacerda, Raquel Caroline Alves / Cerboncini, Ricardo Augusto Serpa / Lyra, Ricardo Brioschi / Lau, Ricardo / Rodrigues, Roberta Costa / Faria, Rogério Rodrigues / Laps, Rudi Ricardo / Althoff, Sérgio Luiz / de Jesus, Shayana / Namba, Sumiko / Braga, Talita Vieira / Molin, Tamara / Câmara, Thanyria P França / Enedino, Thayz Rodrigues / Wischhoff, Uschi / de Oliveira, Vanessa Cristina / Leandro-Silva, Victor / Araújo-Lima, Vitor / de Oliveira Lunardi, Vitor / de Gusmão, Reginaldo Farias / de Souza Correia, Jozélia Maria / Gaspar, Lucas P / Fonseca, Renata Cristina Batista / Neto, Paulo Affonso Fonseca Pires / de Aquino, Ana Carla Medeiros Morato / de Camargo, Bruna Betagni / Cezila, Beatriz Azevedo / Costa, Leonardo Marques / Paolino, Roberta Montanheiro / Kanda, Claudia Zukeran / Monteiro, Erison C S / Oshima, Júlia Emi F / Alves-Eigenheer, Milene / Pizo, Marco Aurelio / Silveira, Luís F / Galetti, Mauro / Ribeiro, Milton Cezar

Ecology

2019 Volume 100, Issue 6, Page(s) e02647

Abstract	Scientists have long been trying to understand why the Neotropical region holds the highest diversity of birds on Earth. Recently, there has been increased interest in morphological variation between and within species, and in how climate, topography, and anthropogenic pressures may explain and affect phenotypic variation. Because morphological data are not always available for many species at the local or regional scale, we are limited in our understanding of intra- and interspecies spatial morphological variation. Here, we present the ATLANTIC BIRD TRAITS, a data set that includes measurements of up to 44 morphological traits in 67,197 bird records from 2,790 populations distributed throughout the Atlantic forests of South America. This data set comprises information, compiled over two centuries (1820-2018), for 711 bird species, which represent 80% of all known bird diversity in the Atlantic Forest. Among the most commonly reported traits are sex (n = 65,717), age (n = 63,852), body mass (n = 58,768), flight molt presence (n = 44,941), molt presence (n = 44,847), body molt presence (n = 44,606), tail length (n = 43,005), reproductive stage (n = 42,588), bill length (n = 37,409), body length (n = 28,394), right wing length (n = 21,950), tarsus length (n = 20,342), and wing length (n = 18,071). The most frequently recorded species are Chiroxiphia caudata (n = 1,837), Turdus albicollis (n = 1,658), Trichothraupis melanops (n = 1,468), Turdus leucomelas (n = 1,436), and Basileuterus culicivorus (n = 1,384). The species recorded in the greatest number of sampling localities are Basileuterus culicivorus (n = 243), Trichothraupis melanops (n = 242), Chiroxiphia caudata (n = 210), Platyrinchus mystaceus (n = 208), and Turdus rufiventris (n = 191). ATLANTIC BIRD TRAITS (ABT) is the most comprehensive data set on measurements of bird morphological traits found in a biodiversity hotspot; it provides data for basic and applied research at multiple scales, from individual to community, and from the local to the macroecological perspectives. No copyright or proprietary restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications or teaching and educational activities.
Language	English
Publishing date	2019-04-12
Publishing country	United States
Document type	Journal Article
ZDB-ID	2010140-5
ISSN	1939-9170 ; 0012-9658
ISSN (online)	1939-9170
ISSN	0012-9658
DOI	10.1002/ecy.2647
Database	MEDical Literature Analysis and Retrieval System OnLINE

a data set of bird morphological traits from the Atlantic forests of South America

2019 Volume 100, Issue 6

Abstract	Scientists have long been trying to understand why the Neotropical region holds the highest diversity of birds on Earth. Recently, there has been increased interest in morphological variation between and within species, and in how climate, topography, and anthropogenic pressures may explain and affect phenotypic variation. Because morphological data are not always available for many species at the local or regional scale, we are limited in our understanding of intra- and interspecies spatial morphological variation. Here, we present the ATLANTIC BIRD TRAITS, a data set that includes measurements of up to 44 morphological traits in 67,197 bird records from 2,790 populations distributed throughout the Atlantic forests of South America. This data set comprises information, compiled over two centuries (1820–2018), for 711 bird species, which represent 80% of all known bird diversity in the Atlantic Forest. Among the most commonly reported traits are sex (n = 65,717), age (n = 63,852), body mass (n = 58,768), flight molt presence (n = 44,941), molt presence (n = 44,847), body molt presence (n = 44,606), tail length (n = 43,005), reproductive stage (n = 42,588), bill length (n = 37,409), body length (n = 28,394), right wing length (n = 21,950), tarsus length (n = 20,342), and wing length (n = 18,071). The most frequently recorded species are Chiroxiphia caudata (n = 1,837), Turdus albicollis (n = 1,658), Trichothraupis melanops (n = 1,468), Turdus leucomelas (n = 1,436), and Basileuterus culicivorus (n = 1,384). The species recorded in the greatest number of sampling localities are Basileuterus culicivorus (n = 243), Trichothraupis melanops (n = 242), Chiroxiphia caudata (n = 210), Platyrinchus mystaceus (n = 208), and Turdus rufiventris (n = 191). ATLANTIC BIRD TRAITS (ABT) is the most comprehensive data set on measurements of bird morphological traits found in a biodiversity hotspot; it provides data for basic and applied research at multiple scales, from individual to community, and from the local to the ...
Keywords	body size ; functional diversity ; individual variation ; interspecific variation ; phenotypic plasticity ; phylogenetic diversity ; rapid evolution ; tropical forest
Subject code	590
Language	English
Publishing country	nl
Document type	Article ; Online
ZDB-ID	1797-8
ISSN	0012-9658
ISSN	0012-9658
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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