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Article: Resolving deep evolutionary relationships within the RNA virus phylum

Sadiq, Sabrina / Chen, Yan-Mei / Zhang, Yong-Zhen / Holmes, Edward C

2022 Volume 8, Issue 1, Page(s) veac055

Abstract: The RNA virus ... ...

Abstract	The RNA virus phylum
Language	English
Publishing date	2022-06-14
Publishing country	England
Document type	Journal Article
ZDB-ID	2818949-8
ISSN	2057-1577
ISSN	2057-1577
DOI	10.1093/ve/veac055
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: RdRp-scan: A bioinformatic resource to identify and annotate divergent RNA viruses in metagenomic sequence data.

Charon, Justine / Buchmann, Jan P / Sadiq, Sabrina / Holmes, Edward C

Virus evolution

2022 Volume 8, Issue 2, Page(s) veac082

Abstract: Despite a rapid expansion in the number of documented viruses following the advent of metagenomic sequencing, the identification and annotation of highly divergent RNA viruses remain challenging, particularly from poorly characterized hosts and ... ...

Abstract	Despite a rapid expansion in the number of documented viruses following the advent of metagenomic sequencing, the identification and annotation of highly divergent RNA viruses remain challenging, particularly from poorly characterized hosts and environmental samples. Protein structures are more conserved than primary sequence data, such that structure-based comparisons provide an opportunity to reveal the viral 'dusk matter': viral sequences with low, but detectable, levels of sequence identity to known viruses with available protein structures. Here, we present a new open computational resource-RdRp-scan-that contains a standardized bioinformatic toolkit to identify and annotate divergent RNA viruses in metagenomic sequence data based on the detection of RNA-dependent RNA polymerase (RdRp) sequences. By combining RdRp-specific hidden Markov models (HMMs) and structural comparisons, we show that RdRp-scan can efficiently detect RdRp sequences with identity levels as low as 10 per cent to those from known viruses and not identifiable using standard sequence-to-sequence comparisons. In addition, to facilitate the annotation and placement of newly detected and divergent virus-like sequences into the diversity of RNA viruses, RdRp-scan provides new custom and curated databases of viral RdRp sequences and core motifs, as well as pre-built RdRp multiple sequence alignments. In parallel, our analysis of the sequence diversity detected by the RdRp-scan revealed that while most of the taxonomically unassigned RdRps fell into pre-established clusters, some fell into potentially new orders of RNA viruses related to the
Language	English
Publishing date	2022-09-01
Publishing country	England
Document type	Journal Article
ZDB-ID	2818949-8
ISSN	2057-1577
ISSN	2057-1577
DOI	10.1093/ve/veac082
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Article ; Online: Australian terrestrial environments harbour extensive RNA virus diversity.

Sadiq, Sabrina / Harvey, Erin / Mifsud, Jonathon C O / Minasny, Budiman / McBratney, Alex B / Pozza, Liana E / Mahar, Jackie E / Holmes, Edward C

Virology

2024 Volume 593, Page(s) 110007

Abstract: Australia is home to a diverse range of unique native fauna and flora. To address whether Australian ecosystems also harbour unique viruses, we performed meta-transcriptomic sequencing of 16 farmland and sediment samples taken from the east and west ... ...

Abstract	Australia is home to a diverse range of unique native fauna and flora. To address whether Australian ecosystems also harbour unique viruses, we performed meta-transcriptomic sequencing of 16 farmland and sediment samples taken from the east and west coasts of Australia. We identified 2460 putatively novel RNA viruses across 18 orders, the vast majority of which belonged to the microbe-associated phylum Lenarviricota. In many orders, such as the Nodamuvirales and Ghabrivirales, the novel viruses identified here comprised entirely new clades. Novel viruses also fell between established genera or families, such as in the Cystoviridae and Picornavirales, while highly divergent lineages were identified in the Sobelivirales and Ghabrivirales. Viral read abundance and alpha diversity were influenced by sampling site, soil type and land use, but not by depth from the surface. In sum, Australian soils and sediments are home to remarkable viral diversity, reflecting the biodiversity of local fauna and flora.
MeSH term(s)	Humans ; Ecosystem ; Australia ; Phylogeny ; RNA Viruses/genetics ; Viruses
Language	English
Publishing date	2024-02-08
Publishing country	United States
Document type	Journal Article
ZDB-ID	200425-2
ISSN	1096-0341 ; 0042-6822
ISSN (online)	1096-0341
ISSN	0042-6822
DOI	10.1016/j.virol.2024.110007
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Article ; Online: A metatranscriptomic analysis of geothermal hot springs reveals diverse RNA viruses including the phylum Lenarviricota.

Le Lay, Callum / Stott, Matthew B / Shi, Mang / Sadiq, Sabrina / Holmes, Edward C

Virology

2023 Volume 587, Page(s) 109873

Abstract: Little is known about the diversity of RNA viruses in geothermal systems. We generated total RNA sequencing data from two hot springs in Kuirau Park, Rotorua, New Zealand. In one data set, from a 71.8 °C pool, we observed a microbial community that was ... ...

Abstract	Little is known about the diversity of RNA viruses in geothermal systems. We generated total RNA sequencing data from two hot springs in Kuirau Park, Rotorua, New Zealand. In one data set, from a 71.8 °C pool, we observed a microbial community that was 98.5% archaea. The second data set, representing a cooler 36.8 °C geothermal hot spring, had a more diverse microbial profile: 58% bacteria, 34.5% eukaryotes and 7.5% archaea. Within this latter pool, we detected sequences likely representing 23 RNA viruses from the families Astroviridae, Tombusviridae, Polycipiviridae, Discistroviridae, Partitiviridae, and Mitoviridae, as well as from unclassified clades of the orders Tolivirales, Picornavirales, and Ghabrivirales. Most viruses had uncertain host associations. Of particular note, we identified four novel RNA viruses from the phylum Lenarviricota, commonly associated with bacteria and fungi, that occupied a divergent phylogenetic position within unclassified clades and may represent an ancient order-level taxon of unknown host association.
Language	English
Publishing date	2023-08-24
Publishing country	United States
Document type	Journal Article
ZDB-ID	200425-2
ISSN	1096-0341 ; 0042-6822
ISSN (online)	1096-0341
ISSN	0042-6822
DOI	10.1016/j.virol.2023.109873
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Article ; Online: RNA viromes from terrestrial sites across China expand environmental viral diversity.

Chen, Yan-Mei / Sadiq, Sabrina / Tian, Jun-Hua / Chen, Xiao / Lin, Xian-Dan / Shen, Jin-Jin / Chen, Hao / Hao, Zong-Yu / Wille, Michelle / Zhou, Zhuo-Cheng / Wu, Jun / Li, Feng / Wang, Hong-Wei / Yang, Wei-Di / Xu, Qi-Yi / Wang, Wen / Gao, Wen-Hua / Holmes, Edward C / Zhang, Yong-Zhen

Nature microbiology

2022 Volume 7, Issue 8, Page(s) 1312–1323

Abstract: Environmental RNA viruses are ubiquitous and diverse, and probably have important ecological and biogeochemical impacts. Understanding the global diversity of RNA viruses is limited by sampling biases, dependence on cell culture and PCR for virus ... ...

Abstract	Environmental RNA viruses are ubiquitous and diverse, and probably have important ecological and biogeochemical impacts. Understanding the global diversity of RNA viruses is limited by sampling biases, dependence on cell culture and PCR for virus discovery, and a focus on viruses pathogenic to humans or economically important animals and plants. To address this knowledge gap, we generated metatranscriptomic sequence data from 32 diverse environments in 16 provinces and regions of China. We identified 6,624 putatively novel virus operational taxonomic units from soil, sediment and faecal samples, greatly expanding known diversity of the RNA virosphere. These newly identified viruses included positive-sense, negative-sense and double-strand RNA viruses from at least 62 families. Sediments and animal faeces were rich sources of viruses. Virome compositions were affected by local environmental factors, including organic content and eukaryote species abundance. Notably, environmental factors had a greater impact on the abundance and diversity of plant, fungal and bacterial viruses than of animal viromes. Our data confirm that RNA viruses are an integral part of both terrestrial and aquatic ecosystems.
MeSH term(s)	Animals ; China ; Ecosystem ; Genome, Viral ; Humans ; Phylogeny ; Plants ; RNA ; RNA Viruses/genetics ; Virome ; Viruses/genetics
Chemical Substances	RNA (63231-63-0)
Language	English
Publishing date	2022-07-28
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ISSN	2058-5276
ISSN (online)	2058-5276
DOI	10.1038/s41564-022-01180-2
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Article ; Online: Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm

Kuhn, Jens H / Abe, Junya / Adkins, Scott / Alkhovsky, Sergey V / Avšič-Županc, Tatjana / Ayllón, María A / Bahl, Justin / Balkema-Buschmann, Anne / Ballinger, Matthew J / Kumar Baranwal, Virendra / Beer, Martin / Bejerman, Nicolas / Bergeron, Éric / Biedenkopf, Nadine / Blair, Carol D / Blasdell, Kim R / Blouin, Arnaud G / Bradfute, Steven B / Briese, Thomas /

Brown, Paul A / Buchholz, Ursula J / Buchmeier, Michael J / Bukreyev, Alexander / Burt, Felicity / Büttner, Carmen / Calisher, Charles H / Cao, Mengji / Casas, Inmaculada / Chandran, Kartik / Charrel, Rémi N / Kumar Chaturvedi, Krishna / Chooi, Kar Mun / Crane, Anya / Dal Bó, Elena / Carlos de la Torre, Juan / de Souza, William M / de Swart, Rik L / Debat, Humberto / Dheilly, Nolwenn M / Di Paola, Nicholas / Di Serio, Francesco / Dietzgen, Ralf G / Digiaro, Michele / Drexler, J Felix / Duprex, W Paul / Dürrwald, Ralf / Easton, Andrew J / Elbeaino, Toufic / Ergünay, Koray / Feng, Guozhong / Firth, Andrew E / Fooks, Anthony R / Formenty, Pierre B H / Freitas-Astúa, Juliana / Gago-Zachert, Selma / Laura García, María / García-Sastre, Adolfo / Garrison, Aura R / Gaskin, Thomas R / Gong, Wenjie / Gonzalez, Jean-Paul J / de Bellocq, JoëlleGoüy / Griffiths, Anthony / Groschup, Martin H / Günther, Ines / Günther, Stephan / Hammond, John / Hasegawa, Yusuke / Hayashi, Kazusa / Hepojoki, Jussi / Higgins, Colleen M / Hongō, Seiji / Horie, Masayuki / Hughes, Holly R / Hume, Adam J / Hyndman, Timothy H / Ikeda, Kenichi / Jiāng, Dàohóng / Jonson, Gilda B / Junglen, Sandra / Klempa, Boris / Klingström, Jonas / Kondō, Hideki / Koonin, Eugene V / Krupovic, Mart / Kubota, Kenji / Kurath, Gael / Laenen, Lies / Lambert, Amy J / Lǐ, Jiànróng / Li, Jun-Min / Liu, Ran / Lukashevich, Igor S / MacDiarmid, Robin M / Maes, Piet / Marklewitz, Marco / Marshall, Sergio H / Marzano, Shin-Yi L / McCauley, John W / Mirazimi, Ali / Mühlberger, Elke / Nabeshima, Tomoyuki / Naidu, Rayapati / Natsuaki, Tomohide / Navarro, Beatriz / Navarro, José A / Neriya, Yutaro / Netesov, Sergey V / Neumann, Gabriele / Nowotny, Norbert / Nunes, Márcio R T / Ochoa-Corona, Francisco M / Okada, Tomoyuki / Palacios, Gustavo / Pallás, Vicente / Papa, Anna / Paraskevopoulou, Sofia / Parrish, Colin R / Pauvolid-Corrêa, Alex / Pawęska, Janusz T / Pérez, Daniel R / Pfaff, Florian / Plemper, Richard K / Postler, Thomas S / Rabbidge, Lee O / Radoshitzky, Sheli R / Ramos-González, Pedro L / Rehanek, Marius / Resende, Renato O / Reyes, Carina A / Rodrigues, Thaís C S / Romanowski, Víctor / Rubbenstroth, Dennis / Rubino, Luisa / Runstadler, Jonathan A / Sabanadzovic, Sead / Sadiq, Sabrina / Salvato, Maria S / Sasaya, Takahide / Schwemmle, Martin / Sharpe, Stephen R / Shi, Mang / Shimomoto, Yoshifumi / Kavi Sidharthan, Venkidusamy / Sironi, Manuela / Smither, Sophie / Song, Jin-Won / Spann, Kirsten M / Spengler, Jessica R / Stenglein, Mark D / Takada, Ayato / Takeyama, Sawana / Tatara, Akio / Tesh, Robert B / Thornburg, Natalie J / Tian, Xin / Tischler, Nicole D / Tomitaka, Yasuhiro / Tomonaga, Keizō / Tordo, Noël / Tu, Changchun / Turina, Massimo / Tzanetakis, Ioannis E / Maria Vaira, Anna / van den Hoogen, Bernadette / Vanmechelen, Bert / Vasilakis, Nikos / Verbeek, Martin / von Bargen, Susanne / Wada, Jiro / Wahl, Victoria / Walker, Peter J / Waltzek, Thomas B / Whitfield, Anna E / Wolf, Yuri I / Xia, Han / Xylogianni, Evanthia / Yanagisawa, Hironobu / Yano, Kazutaka / Ye, Gongyin / Yuan, Zhiming / Zerbini, F Murilo / Zhang, Guilin / Zhang, Song / Zhang, Yong-Zhen / Zhao, Lu / Økland, Arnfinn Lodden

The Journal of general virology

2023 Volume 104, Issue 8

Abstract: In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the ... ...

Abstract	In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum
MeSH term(s)	Negative-Sense RNA Viruses ; RNA Viruses/genetics ; RNA-Dependent RNA Polymerase/genetics
Chemical Substances	RNA-Dependent RNA Polymerase (EC 2.7.7.48)
Language	English
Publishing date	2023-08-25
Publishing country	England
Document type	Letter ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, N.I.H., Extramural ; Research Support, N.I.H., Intramural
ZDB-ID	219316-4
ISSN	1465-2099 ; 0022-1317
ISSN (online)	1465-2099
ISSN	0022-1317
DOI	10.1099/jgv.0.001864
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Article ; Online: Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria

Kuhn, Jens H. / Abe, Junya / Adkins, Scott / Alkhovsky, Sergey V. / Avšič-Županc, Tatjana / Ayllón, María A. / Bahl, Justin / Balkema-Buschmann, Anne / Ballinger, Matthew J. / Kumar Baranwal, Virendra / Beer, Martin / Bejerman, Nicolas / Bergeron, Éric / Biedenkopf, Nadine / Blair, Carol D. / Blasdell, Kim R. / Blouin, Arnaud G. / Bradfute, Steven B. / Briese, Thomas /

Brown, Paul A. / Buchholz, Ursula J. / Buchmeier, Michael J. / Bukreyev, Alexander / Burt, Felicity / Büttner, Carmen / Calisher, Charles H. / Cao, Mengji / Casas, Inmaculada / Chandran, Kartik / Charrel, Rémi N. / Kumar Chaturvedi, Krishna / Chooi, Kar Mun / Crane, Anya / Dal Bó, Elena / Carlos de la Torre, Juan / de Souza, William M. / de Swart, Rik L. / Debat, Humberto / Dheilly, Nolwenn M. / Di Paola, Nicholas / Di Serio, Francesco / Dietzgen, Ralf G. / Digiaro, Michele / Drexler, J. Felix / Duprex, W. Paul / Dürrwald, Ralf / Easton, Andrew J. / Elbeaino, Toufic / Ergünay, Koray / Feng, Guozhong / Firth, Andrew E. / Fooks, Anthony R. / Formenty, Pierre B. H. / Freitas-Astúa, Juliana / Gago-Zachert, Selma / Laura García, María / García-Sastre, Adolfo / Garrison, Aura R. / Gaskin, Thomas R. / Gong, Wenjie / Gonzalez, Jean-Paul J. / de Bellocq, JoëlleGoüy / Griffiths, Anthony / Groschup, Martin H. / Günther, Ines / Günther, Stephan / Hammond, John / Hasegawa, Yusuke / Hayashi, Kazusa / Hepojoki, Jussi / Higgins, Colleen M. / Hongō, Seiji / Horie, Masayuki / Hughes, Holly R. / Hume, Adam J. / Hyndman, Timothy H. / Ikeda, Kenichi / Jiāng, Dàohóng / Jonson, Gilda B. / Junglen, Sandra / Klempa, Boris / Klingström, Jonas / Kondō, Hideki / Koonin, Eugene V. / Krupovic, Mart / Kubota, Kenji / Kurath, Gael / Laenen, Lies / Lambert, Amy J. / Lǐ, Jiànróng / Li, Jun-Min / Liu, Ran / Lukashevich, Igor S. / MacDiarmid, Robin M. / Maes, Piet / Marklewitz, Marco / Marshall, Sergio H. / Marzano, Shin-Yi L. / McCauley, John W. / Mirazimi, Ali / Mühlberger, Elke / Nabeshima, Tomoyuki / Naidu, Rayapati / Natsuaki, Tomohide / Navarro, Beatriz / Navarro, José A. / Neriya, Yutaro / Netesov, Sergey V. / Neumann, Gabriele / Nowotny, Norbert / Nunes, Márcio R. T. / Ochoa-Corona, Francisco M. / Okada, Tomoyuki / Palacios, Gustavo / Pallás, Vicente / Papa, Anna / Paraskevopoulou, Sofia / Parrish, Colin R. / Pauvolid-Corrêa, Alex / Pawęska, Janusz T. / Pérez, Daniel R. / Pfaff, Florian / Plemper, Richard K. / Postler, Thomas S. / Rabbidge, Lee O. / Radoshitzky, Sheli R. / Ramos-González, Pedro L. / Rehanek, Marius / Resende, Renato O. / Reyes, Carina A. / Rodrigues, Thaís C. S. / Romanowski, Víctor / Rubbenstroth, Dennis / Rubino, Luisa / Runstadler, Jonathan A. / Sabanadzovic, Sead / Sadiq, Sabrina / Salvato, Maria S. / Sasaya, Takahide / Schwemmle, Martin / Sharpe, Stephen R. / Shi, Mang / Shimomoto, Yoshifumi / Kavi Sidharthan, Venkidusamy / Sironi, Manuela / Smither, Sophie / Song, Jin-Won / Spann, Kirsten M. / Spengler, Jessica R. / Stenglein, Mark D. / Takada, Ayato / Takeyama, Sawana / Tatara, Akio / Tesh, Robert B. / Thornburg, Natalie J. / Tian, Xin / Tischler, Nicole D. / Tomitaka, Yasuhiro / Tomonaga, Keizō / Tordo, Noël / Tu, Changchun / Turina, Massimo / Tzanetakis, Ioannis E. / Maria Vaira, Anna / van den Hoogen, Bernadette / Vanmechelen, Bert / Vasilakis, Nikos / Verbeek, Martin / von Bargen, Susanne / Wada, Jiro / Wahl, Victoria / Walker, Peter J. / Waltzek, Thomas B. / Whitfield, Anna E. / Wolf, Yuri I. / Xia, Han / Xylogianni, Evanthia / Yanagisawa, Hironobu / Yano, Kazutaka / Ye, Gongyin / Yuan, Zhiming / Zerbini, F. Murilo / Zhang, Guilin / Zhang, Song / Zhang, Yong-Zhen / Zhao, Lu / Økland, Arnfinn Lodden

kingdom Orthornavirae: phylum Negarnaviricota).

2023

Abstract: In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by one new family, 14 new genera, and 140 new ... ...

Abstract	In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by one new family, 14 new genera, and 140 new species. Two genera and 538 species were renamed. One species was moved, and four were abolished. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV.
Keywords	Text ; ddc:570 ; Orthomyxoviridae ; Tenuivirus ; Bunyavirus ; Filoviridae ; Ictv ; International Committee On Taxonomy Of Viruses ; Virus Classification ; Virus Taxonomy ; Paramyxoviridae ; Mononegavirales ; Rhabdoviridae ; Arenaviridae ; Bornaviridae ; Virus Nomenclature ; Pneumoviridae ; Bunyavirales ; Peribunyaviridae ; Mymonaviridae ; Hantaviridae ; Lispiviridae ; Aliusviridae ; Crepuscuviridae ; Discoviridae ; Goujianvirales ; Muvirales ; Myriaviridae ; Natareviridae ; Negarnaviricota ; Orthornavirae ; Serpentovirales ; Sunviridae ; Tosoviridae ; Articulaviral ; Bunyaviral ; Goujianviral ; Megaclassification ; Mononegaviral ; Muviral ; Negarnaviricot ; Serpentoviral ; Nairoviridae ; Nyamiviridae ; Phenuiviridae ; Megataxonomy ; Tospoviridae ; Riboviria ; Tulasviridae ; Aspiviridae
Language	English
Publishing date	2023-08-25
Publishing country	de
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria

Kuhn, Jens H. / Abe, Junya / Adkins, Scott / Alkhovsky, Sergey V. / Avšič-Županc, Tatjana / Ayllón, María A. / Bahl, Justin / Balkema-Buschmann, Anne / Ballinger, Matthew J. / Baranwal, Virendra Kumar / Beer, Martin / Bejerman, Nicolas / Bergeron, Éric / Biedenkopf, Nadine / Blair, Carol D. / Blasdell, Kim R. / Blouin, Arnaud G. / Bradfute, Steven B. / Briese, Thomas /

Brown, Paul A. / Buchholz, Ursula J. / Buchmeier, Michael J. / Bukreyev, Alexander / Burt, Felicity / Büttner, Carmen / Calisher, Charles H. / Cao, Mengji / Casas, Inmaculada / Chandran, Kartik / Charrel, Rémi N. / Chaturvedi, Krishna Kumar / Chooi, Kar Mun / Crane, Anya / Bó, Elena Dal / de la Torre, Juan Carlos / de Souza, William M. / de Swart, Rik L. / Debat, Humberto / Dheilly, Nolwenn M. / Di Paola, Nicholas / Di Serio, Francesco / Dietzgen, Ralf G. / Digiaro, Michele / Drexler, J.F. / Duprex, W.P. / Dürrwald, Ralf / Easton, Andrew J. / Elbeaino, Toufic / Ergünay, Koray / Feng, Guozhong / Firth, Andrew E. / Fooks, Anthony R. / Formenty, Pierre B.H. / Freitas-Astúa, Juliana / Gago-Zachert, Selma / García, María Laura / García-Sastre, Adolfo / Garrison, Aura R. / Gaskin, Thomas R. / Gong, Wenjie / Gonzalez, Jean Paul J. / de Bellocq, Joëlle Goüy / Griffiths, Anthony / Groschup, Martin H. / Günther, Ines / Günther, Stephan / Hammond, John / Hasegawa, Yusuke / Hayashi, Kazusa / Hepojoki, Jussi / Higgins, Colleen M. / Hongō, Seiji / Horie, Masayuki / Hughes, Holly R. / Hume, Adam J. / Hyndman, Timothy H. / Ikeda, Kenichi / Jiāng, Dàohóng / Jonson, Gilda B. / Junglen, Sandra / Klempa, Boris / Klingström, Jonas / Kondō, Hideki / Koonin, Eugene V. / Krupovic, Mart / Kubota, Kenji / Kurath, Gael / Laenen, Lies / Lambert, Amy J. / Lǐ, Jiànróng / Li, Jun Min / Liu, Ran / Lukashevich, Igor S. / MacDiarmid, Robin M. / Maes, Piet / Marklewitz, Marco / Marshall, Sergio H. / Marzano, Shin Yi L. / McCauley, John W. / Mirazimi, Ali / Mühlberger, Elke / Nabeshima, Tomoyuki / Naidu, Rayapati / Natsuaki, Tomohide / Navarro, Beatriz / Navarro, José A. / Neriya, Yutaro / Netesov, Sergey V. / Neumann, Gabriele / Nowotny, Norbert / Nunes, Márcio R.T. / Ochoa-Corona, Francisco M. / Okada, Tomoyuki / Palacios, Gustavo / Pallás, Vicente / Papa, Anna / Paraskevopoulou, Sofia / Parrish, Colin R. / Pauvolid-Corrêa, Alex / Pawęska, Janusz T. / Pérez, Daniel R. / Pfaff, Florian / Plemper, Richard K. / Postler, Thomas S. / Rabbidge, Lee O. / Radoshitzky, Sheli R. / Ramos-González, Pedro L. / Rehanek, Marius / Resende, Renato O. / Reyes, Carina A. / Rodrigues, Thaís C.S. / Romanowski, Víctor / Rubbenstroth, Dennis / Rubino, Luisa / Runstadler, Jonathan A. / Sabanadzovic, Sead / Sadiq, Sabrina / Salvato, Maria S. / Sasaya, Takahide / Schwemmle, Martin / Sharpe, Stephen R. / Shi, Mang / Shimomoto, Yoshifumi / Sidharthan, Venkidusamy Kavi / Sironi, Manuela / Smither, Sophie / Song, Jin Won / Spann, Kirsten M. / Spengler, Jessica R. / Stenglein, Mark D. / Takada, Ayato / Takeyama, Sawana / Tatara, Akio / Tesh, Robert B. / Thornburg, Natalie J. / Tian, Xin / Tischler, Nicole D. / Tomitaka, Yasuhiro / Tomonaga, Keizō / Tordo, Noël / Tu, Changchun / Turina, Massimo / Tzanetakis, Ioannis E. / Vaira, Anna Maria / van den Hoogen, Bernadette / Vanmechelen, Bert / Vasilakis, Nikos / Verbeek, Martin / von Bargen, Susanne / Wada, Jiro / Wahl, Victoria / Walker, Peter J. / Waltzek, Thomas B. / Whitfield, Anna E. / Wolf, Yuri I. / Xia, Han / Xylogianni, Evanthia / Yanagisawa, Hironobu / Yano, Kazutaka / Ye, Gongyin / Yuan, Zhiming / Zerbini, F.M. / Zhang, Guilin / Zhang, Song / Zhang, Yong Zhen / Zhao, Lu / Økland, Arnfinn Lodden

Journal of General Virology

kingdom Orthornavirae: phylum Negarnaviricota)

2023 Volume 104, Issue 8

Abstract	In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by one new family, 14 new genera, and 140 new species. Two genera and 538 species were renamed. One species was moved, and four were abolished.
Keywords	Aliusviridae ; Arenaviridae ; Articulavirales ; Artoviridae ; Aspiviridae ; Bornaviridae ; Bunyavirales ; Crepuscuviridae ; Discoviridae ; Filoviridae ; Fimoviridae ; Goujianvirales ; Hantaviridae ; ICTV ; International Committee on Taxonomy of Viruses ; Jingchuvirales ; Lispiviridae ; Mononegavirales ; Muvirales ; Mymonaviridae ; Myriaviridae ; Nairoviridae ; Natareviridae ; Negarnaviricota ; Nyamiviridae ; Orthomyxoviridae ; Orthornavirae ; Paramyxoviridae ; Peribunyaviridae ; Phasmaviridae ; Phenuiviridae ; Pneumoviridae ; Rhabdoviridae ; Riboviria ; Serpentovirales ; Sunviridae ; Tenuivirus ; Tosoviridae ; Tospoviridae ; Tulasviridae ; articulaviral ; bunyaviral ; bunyavirus ; goujianviral ; megaclassification ; megataxonomy ; mononegaviral ; muviral ; negarnaviricot ; serpentoviral
Language	English
Publishing country	nl
Document type	Article ; Online
ZDB-ID	219316-4
ISSN	1465-2099 ; 0022-1317
ISSN (online)	1465-2099
ISSN	0022-1317
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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