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  1. Article ; Online: Is Parkinson's Disease a Neurodevelopmental Disorder and Will Brain Organoids Help Us to Understand It?

    Schwamborn, Jens C

    Stem cells and development

    2018  Volume 27, Issue 14, Page(s) 968–975

    Abstract: Parkinson's disease (PD) is the second most common neurodegenerative disorder after Alzheimer's disease. The incidence of PD cases increases with age, accordingly classically PD is considered to be an age-associated neurodegenerative disease. In this ... ...

    Abstract Parkinson's disease (PD) is the second most common neurodegenerative disorder after Alzheimer's disease. The incidence of PD cases increases with age, accordingly classically PD is considered to be an age-associated neurodegenerative disease. In this review, the hypothesis that PD is actually a neurodevelopmental disorder that is compensated for a long time will be discussed. However, patients who suffer from PD typically do not show symptoms early in their lives. This implies that, if the hypothesis that PD has a significant neurodevelopmental component is correct, the developmental defects are compensated for a long time. Furthermore, these developmental defects might not causally lead to the disease but increase the susceptibility for disease onset after a "second hit." In this logic, deregulated developmental processes might represent the "first hit." Even a minor developmental defect could lead to a reduced compensatory capacity or reduced fault tolerance of the entire system. In such a case of an already imbalanced system one or more additional hits could perturb the entire system sufficiently to bring it out of balance and lead to the pathology and symptoms which we classify as PD. However, if the developmental hypothesis and the "multiple hit" hypothesis are correct, an early diagnosis of these developmental defects might allow the start of a therapy for at-risk individuals before disease pathology becomes severe and before symptoms occur. Modern stem cell technologies, including the generation of personalized brain organoids, might play an important role in these strategies.
    MeSH term(s) Brain/metabolism ; Brain/physiopathology ; Humans ; Neurodevelopmental Disorders/genetics ; Neurodevelopmental Disorders/metabolism ; Neurodevelopmental Disorders/physiopathology ; Organoids/metabolism ; Organoids/physiopathology ; Parkinson Disease/genetics ; Parkinson Disease/metabolism ; Parkinson Disease/physiopathology
    Language English
    Publishing date 2018-03-12
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 2142214-X
    ISSN 1557-8534 ; 1547-3287
    ISSN (online) 1557-8534
    ISSN 1547-3287
    DOI 10.1089/scd.2017.0289
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Graft-derived neurons and bystander effects are maintained for six months after human iPSC-derived NESC transplantation in mice's cerebella.

    Mendonça, Liliana S / Henriques, Daniel / Fernandes, Vanessa / Moreira, Ricardo / Brás, João / Duarte, Sónia / Schwamborn, Jens C / de Almeida, Luís Pereira

    Scientific reports

    2024  Volume 14, Issue 1, Page(s) 3236

    Abstract: Machado-Joseph disease (MJD) is a neurodegenerative disorder characterized by widespread neuronal death affecting the cerebellum. Cell therapy can trigger neuronal replacement and neuroprotection through bystander effects providing a therapeutic option ... ...

    Abstract Machado-Joseph disease (MJD) is a neurodegenerative disorder characterized by widespread neuronal death affecting the cerebellum. Cell therapy can trigger neuronal replacement and neuroprotection through bystander effects providing a therapeutic option for neurodegenerative diseases. Here, human control (CNT) and MJD iPSC-derived neuroepithelial stem cells (NESC) were established and tested for their therapeutic potential. Cells' neuroectodermal phenotype was demonstrated. Brain organoids obtained from the Control NESC showed higher mRNA levels of genes related to stem cells' bystander effects, such as BDNF, NEUROD1, and NOTCH1, as compared with organoids produced from MJD NESC, suggesting that Control NESC have a higher therapeutic potential. Graft-derived glia and neurons, such as cells positive for markers of cerebellar neurons, were detected six months after NESC transplantation in mice cerebella. The graft-derived neurons established excitatory and inhibitory synapses in the host cerebella, although CNT neurons exhibited higher excitatory synapse numbers compared with MJD neurons. Cell grafts, mainly CNT NESC, sustained the bystander effects through modulation of inflammatory interleukins (IL1B and IL10), neurotrophic factors (NGF), and neurogenesis-related proteins (Msi1 and NeuroD1), for six months in the mice cerebella. Altogether this study demonstrates the long-lasting therapeutic potential of human iPSC-derived NESC in the cerebellum.
    MeSH term(s) Mice ; Animals ; Humans ; Induced Pluripotent Stem Cells/metabolism ; Bystander Effect ; Neurons/metabolism ; Cerebellum/metabolism ; Machado-Joseph Disease/metabolism
    Language English
    Publishing date 2024-02-08
    Publishing country England
    Document type Journal Article
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-024-53542-x
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  3. Article ; Online: Alpha-synuclein pathology is associated with astrocyte senescence in a midbrain organoid model of familial Parkinson's disease.

    Muwanigwa, Mudiwa N / Modamio-Chamarro, Jennifer / Antony, Paul M A / Gomez-Giro, Gemma / Krüger, Rejko / Bolognin, Silvia / Schwamborn, Jens C

    Molecular and cellular neurosciences

    2024  Volume 128, Page(s) 103919

    Abstract: Parkinson's disease (PD) is a complex, progressive neurodegenerative disease characterized by the loss of dopaminergic neurons in the substantia nigra pars compacta in the midbrain. Despite extensive research efforts, the molecular and cellular changes ... ...

    Abstract Parkinson's disease (PD) is a complex, progressive neurodegenerative disease characterized by the loss of dopaminergic neurons in the substantia nigra pars compacta in the midbrain. Despite extensive research efforts, the molecular and cellular changes that precede neurodegeneration in PD are poorly understood. To address this, here we describe the use of patient specific human midbrain organoids harboring the SNCA triplication to investigate mechanisms underlying dopaminergic degeneration. Our midbrain organoid model recapitulates key pathological hallmarks of PD, including the aggregation of α-synuclein and the progressive loss of dopaminergic neurons. We found that these pathological hallmarks are associated with an increase in senescence associated cellular phenotypes in astrocytes including nuclear lamina defects, the presence of senescence associated heterochromatin foci, and the upregulation of cell cycle arrest genes. These results suggest a role of pathological α-synuclein in inducing astrosenescence which may, in turn, increase the vulnerability of dopaminergic neurons to degeneration.
    MeSH term(s) Humans ; Parkinson Disease/metabolism ; alpha-Synuclein/genetics ; alpha-Synuclein/metabolism ; Astrocytes/metabolism ; Neurodegenerative Diseases/metabolism ; Mesencephalon/metabolism ; Mesencephalon/pathology ; Dopaminergic Neurons/metabolism ; Organoids/metabolism ; Organoids/pathology ; Substantia Nigra/metabolism
    Chemical Substances alpha-Synuclein
    Language English
    Publishing date 2024-02-01
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1046640-x
    ISSN 1095-9327 ; 1044-7431
    ISSN (online) 1095-9327
    ISSN 1044-7431
    DOI 10.1016/j.mcn.2024.103919
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  4. Article ; Online: A robust protocol for the generation of human midbrain organoids.

    Zagare, Alise / Gobin, Matthieu / Monzel, Anna S / Schwamborn, Jens C

    STAR protocols

    2021  Volume 2, Issue 2, Page(s) 100524

    Abstract: The lack of ... ...

    Abstract The lack of advanced
    MeSH term(s) Cell Culture Techniques/methods ; Cells, Cultured ; Humans ; Mesencephalon/cytology ; Models, Neurological ; Neural Stem Cells/cytology ; Organoids/cytology ; Parkinson Disease
    Language English
    Publishing date 2021-05-04
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 2666-1667
    ISSN (online) 2666-1667
    DOI 10.1016/j.xpro.2021.100524
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Generation of two induced pluripotent stem cell lines and the corresponding isogenic controls from Parkinson's disease patients carrying the heterozygous mutations c.815G > A (p.R272Q) or c.1348C > T (p.R450C) in the RHOT1 gene encoding Miro1.

    Chemla, Axel / Arena, Giuseppe / Onal, Gizem / Walter, Jonas / Berenguer-Escuder, Clara / Grossmann, Dajana / Grünewald, Anne / Schwamborn, Jens C / Krüger, Rejko

    Stem cell research

    2023  Volume 71, Page(s) 103145

    Abstract: Fibroblasts from two Parkinson's disease (PD) patients carrying either the heterozygous mutation c.815G > A (Miro1 p.R272Q) or c.1348C > T (Miro1 p.R450C) in the RHOT1 gene, were converted into induced pluripotent stem cells (iPSCs) using RNA-based and ... ...

    Abstract Fibroblasts from two Parkinson's disease (PD) patients carrying either the heterozygous mutation c.815G > A (Miro1 p.R272Q) or c.1348C > T (Miro1 p.R450C) in the RHOT1 gene, were converted into induced pluripotent stem cells (iPSCs) using RNA-based and episomal reprogramming, respectively. The corresponding isogenic gene-corrected lines have been generated using CRISPR/Cas9 technology. These two isogenic pairs will be used to study Miro1-related molecular mechanisms underlying neurodegeneration in relevant iPSC-derived neuronal models (e.g., midbrain dopaminergic neurons and astrocytes).
    MeSH term(s) Humans ; Parkinson Disease/genetics ; Parkinson Disease/metabolism ; Induced Pluripotent Stem Cells/metabolism ; Mutation/genetics ; Fibroblasts/metabolism ; Dopaminergic Neurons/metabolism ; rho GTP-Binding Proteins/metabolism ; Mitochondrial Proteins/genetics
    Chemical Substances RHOT1 protein, human (EC 3.6.1.-) ; rho GTP-Binding Proteins (EC 3.6.5.2) ; Mitochondrial Proteins
    Language English
    Publishing date 2023-06-14
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2393143-7
    ISSN 1876-7753 ; 1873-5061
    ISSN (online) 1876-7753
    ISSN 1873-5061
    DOI 10.1016/j.scr.2023.103145
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Guidelines for Fluorescent Guided Biallelic HDR Targeting Selection With PiggyBac System Removal for Gene Editing.

    Jarazo, Javier / Qing, Xiaobing / Schwamborn, Jens C

    Frontiers in genetics

    2019  Volume 10, Page(s) 190

    Abstract: The development of new and easy-to-use nucleases, such as CRISPR/Cas9, made tools for gene editing widely accessible to the scientific community. Cas9-based gene editing protocols are robust for creating knock-out models, but the generation of single ... ...

    Abstract The development of new and easy-to-use nucleases, such as CRISPR/Cas9, made tools for gene editing widely accessible to the scientific community. Cas9-based gene editing protocols are robust for creating knock-out models, but the generation of single nucleotide transitions or transversions remains challenging. This is mainly due to the low frequency of homology directed repair, which leads to the screening of a high number of clones to identify positive events. Moreover, lack of simultaneous biallelic modifications, frequently results in second-allele indels. For example, while one allele might undergo homology directed repair, the second can undergo non-homologous end joining repair. Here we present a step-wise protocol for biallelic gene editing. It uses two donors carrying a combination of fluorescent reporters alongside homology arms directed to the same genomic region for biallelic targeting. These homology arms carry the desired composite of modifications to be introduced (homozygous or heterozygous changes). Plus, the backbone of the plasmid carries a third fluorescent reporter for negative selection (to discard random integration events). Fluorescent selection of non-random biallelic targeted clones can be performed by microscopy guided picking or cell sorting (FACS). The positive selection module (PSM), carrying the fluorescence reporter and an antibiotic resistance, is flanked by inverted terminal repeats (ITR) that are recognized by transposase. Upon purification of the clones correctly modified, transfection of the excision-only transposase allows the removal of the PSM resulting in the integration of only the desired modifications.
    Language English
    Publishing date 2019-03-13
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2606823-0
    ISSN 1664-8021
    ISSN 1664-8021
    DOI 10.3389/fgene.2019.00190
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  7. Article ; Online: Method Optimization of Skin Biopsy-Derived Fibroblast Culture for Reprogramming Into Induced Pluripotent Stem Cells.

    Mommaerts, Kathleen / Bellora, Camille / Lambert, Pauline / Türkmen, Seval / Schwamborn, Jens C / Betsou, Fay

    Biopreservation and biobanking

    2021  Volume 20, Issue 1, Page(s) 12–23

    Abstract: Background: ...

    Abstract Background:
    MeSH term(s) Biopsy ; Cell Differentiation ; Cells, Cultured ; Cellular Reprogramming ; Fibroblasts ; Induced Pluripotent Stem Cells ; Skin
    Language English
    Publishing date 2021-08-18
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2593993-2
    ISSN 1947-5543 ; 1947-5535
    ISSN (online) 1947-5543
    ISSN 1947-5535
    DOI 10.1089/bio.2020.0159
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  8. Article ; Online: Structural Plasticity of Dopaminergic Neurons Requires the Activation of the D3R-nAChR Heteromer and the PI3K-ERK1/2/Akt-Induced Expression of c-Fos and p70S6K Signaling Pathway.

    Mutti, Veronica / Bono, Federica / Tomasoni, Zaira / Bontempi, Leonardo / Guglielmi, Adele / Bolognin, Silvia / Schwamborn, Jens C / Missale, Cristina / Fiorentini, Chiara

    Molecular neurobiology

    2022  Volume 59, Issue 4, Page(s) 2129–2149

    Abstract: We have previously shown that the heteromer composed by the dopamine D3 receptor (D3R) and the nicotinic acetylcholine receptor (nAChR) (D3R-nAChR heteromer) is expressed in dopaminergic neurons, activated by nicotine and represents the molecular unit ... ...

    Abstract We have previously shown that the heteromer composed by the dopamine D3 receptor (D3R) and the nicotinic acetylcholine receptor (nAChR) (D3R-nAChR heteromer) is expressed in dopaminergic neurons, activated by nicotine and represents the molecular unit that, in these neurons, contributes to the modulation of critical events such as structural plasticity and neuroprotection. We now extended this study by investigating the D3R-nAChR heteromer properties using various cell models such as transfected HEK293 cells, primary cultures of mouse dopaminergic neurons and human dopaminergic neurons derived from induced pluripotent stem cells.We found that the D3R-nAChR heteromer is the molecular effector that transduces the remodeling properties not only associated with nicotine but also with D3R agonist stimulation: neither nAChR nor D3R, in fact, when express as monomers, are able to elicit these effects. Moreover, strong and sustained activation of the PI3K-ERK1/2/Akt pathways is coupled with D3R-nAChR heteromer stimulation, leading to the expression of the immediate-early gene c-Fos and to sustained phosphorylation of cytosolic p70 ribosomal S6 kinase (p70S6K), critical for dendritic remodeling. By contrast, while D3R stimulation results in rapid and transient activation of both Erk1/2 and Akt, that is PI3K-dependent, stimulation of nAChR is associated with persistent activation of Erk1/2 and Akt, in a PI3K-independent way. Thus, the D3R-nAChR heteromer and its ability to trigger the PI3K-ERK1/2/Akt signaling pathways may represent a novel target for preserving dopaminergic neurons healthy and for conferring neuronal protection against injuries.
    MeSH term(s) Animals ; Dopaminergic Neurons/metabolism ; HEK293 Cells ; Humans ; MAP Kinase Signaling System ; Mice ; Nicotine/pharmacology ; Phosphatidylinositol 3-Kinases/metabolism ; Proto-Oncogene Proteins c-akt/metabolism ; Proto-Oncogene Proteins c-fos/metabolism ; Receptors, Dopamine D3/metabolism ; Receptors, Nicotinic/metabolism ; Ribosomal Protein S6 Kinases, 70-kDa/metabolism ; Signal Transduction
    Chemical Substances Proto-Oncogene Proteins c-fos ; Receptors, Dopamine D3 ; Receptors, Nicotinic ; Nicotine (6M3C89ZY6R) ; Proto-Oncogene Proteins c-akt (EC 2.7.11.1) ; Ribosomal Protein S6 Kinases, 70-kDa (EC 2.7.11.1)
    Language English
    Publishing date 2022-01-19
    Publishing country United States
    Document type Journal Article
    ZDB-ID 645020-9
    ISSN 1559-1182 ; 0893-7648
    ISSN (online) 1559-1182
    ISSN 0893-7648
    DOI 10.1007/s12035-022-02748-z
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  9. Article ; Online: Midbrain organoids mimic early embryonic neurodevelopment and recapitulate LRRK2-p.Gly2019Ser-associated gene expression.

    Zagare, Alise / Barmpa, Kyriaki / Smajic, Semra / Smits, Lisa M / Grzyb, Kamil / Grünewald, Anne / Skupin, Alexander / Nickels, Sarah L / Schwamborn, Jens C

    American journal of human genetics

    2022  Volume 109, Issue 2, Page(s) 311–327

    Abstract: Human brain organoid models that recapitulate the physiology and complexity of the human brain have a great potential for in vitro disease modeling, in particular for neurodegenerative diseases, such as Parkinson disease. In the present study, we compare ...

    Abstract Human brain organoid models that recapitulate the physiology and complexity of the human brain have a great potential for in vitro disease modeling, in particular for neurodegenerative diseases, such as Parkinson disease. In the present study, we compare single-cell RNA-sequencing data of human midbrain organoids to the developing human embryonic midbrain. We demonstrate that the in vitro model is comparable to its in vivo equivalents in terms of developmental path and cellular composition. Moreover, we investigate the potential of midbrain organoids for modeling early developmental changes in Parkinson disease. Therefore, we compare the single-cell RNA-sequencing data of healthy-individual-derived midbrain organoids to their isogenic LRRK2-p.Gly2019Ser-mutant counterparts. We show that the LRRK2 p.Gly2019Ser variant alters neurodevelopment, resulting in an untimely and incomplete differentiation with reduced cellular variability. Finally, we present four candidate genes, APP, DNAJC6, GATA3, and PTN, that might contribute to the LRRK2-p.Gly2019Ser-associated transcriptome changes that occur during early neurodevelopment.
    MeSH term(s) Amino Acid Substitution ; Amyloid beta-Protein Precursor/genetics ; Amyloid beta-Protein Precursor/metabolism ; Carrier Proteins/genetics ; Carrier Proteins/metabolism ; Cell Differentiation ; Cytokines/genetics ; Cytokines/metabolism ; Embryo, Mammalian ; GATA3 Transcription Factor/genetics ; GATA3 Transcription Factor/metabolism ; Gene Expression Regulation, Developmental ; Glycine/chemistry ; Glycine/metabolism ; HSP40 Heat-Shock Proteins/genetics ; HSP40 Heat-Shock Proteins/metabolism ; Humans ; Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/genetics ; Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/metabolism ; Mesencephalon ; Models, Biological ; Mutation ; Neurogenesis/genetics ; Organoids/metabolism ; Organoids/pathology ; Parkinson Disease/genetics ; Parkinson Disease/metabolism ; Parkinson Disease/pathology ; Sequence Analysis, RNA ; Serine/chemistry ; Serine/metabolism ; Single-Cell Analysis/methods ; Transcriptome
    Chemical Substances APP protein, human ; Amyloid beta-Protein Precursor ; Carrier Proteins ; Cytokines ; DNAJC6 protein, human ; GATA3 Transcription Factor ; GATA3 protein, human ; HSP40 Heat-Shock Proteins ; pleiotrophin (134034-50-7) ; Serine (452VLY9402) ; LRRK2 protein, human (EC 2.7.11.1) ; Leucine-Rich Repeat Serine-Threonine Protein Kinase-2 (EC 2.7.11.1) ; Glycine (TE7660XO1C)
    Language English
    Publishing date 2022-01-24
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 219384-x
    ISSN 1537-6605 ; 0002-9297
    ISSN (online) 1537-6605
    ISSN 0002-9297
    DOI 10.1016/j.ajhg.2021.12.009
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  10. Article ; Online: Highly scalable and standardized organ-on-chip platform with TEER for biological barrier modeling.

    Nguyen, Hoang-Tuan / Rissanen, Siiri-Liisa / Peltokangas, Mimosa / Laakkonen, Tino / Kettunen, Jere / Barthod, Lara / Sivakumar, Ragul / Palojärvi, Anniina / Junttila, Pauliina / Talvitie, Jussi / Bassis, Michele / Nickels, Sarah L / Kalvala, Sara / Ilina, Polina / Tammela, Päivi / Lehtonen, Sarka / Schwamborn, Jens C / Mosser, Sebastien / Singh, Prateek

    Tissue barriers

    2024  , Page(s) 2315702

    Abstract: The development of new therapies is hampered by the lack of predictive, and patient-relevant in vitro models. Organ-on-chip (OOC) technologies can potentially recreate physiological features and hold great promise for tissue and disease modeling. However, ...

    Abstract The development of new therapies is hampered by the lack of predictive, and patient-relevant in vitro models. Organ-on-chip (OOC) technologies can potentially recreate physiological features and hold great promise for tissue and disease modeling. However, the non-standardized design of these chips and perfusion control systems has been a barrier to quantitative high-throughput screening (HTS). Here we present a scalable OOC microfluidic platform for applied kinetic in vitro assays (AKITA) that is applicable for high, medium, and low throughput. Its standard 96-well plate and 384-well plate layouts ensure compatibility with existing laboratory workflows and high-throughput data collection and analysis tools. The AKITA plate is optimized for the modeling of vascularized biological barriers, primarily the blood-brain barrier, skin, and lung, with precise flow control on a custom rocker. The integration of trans-epithelial electrical resistance (TEER) sensors allows rapid and repeated monitoring of barrier integrity over long time periods. Together with automated liquid handling and compound permeability testing analyses, we demonstrate the flexibility of the AKITA platform for establishing human-relevant models for preclinical drug and precision medicine's efficacy, toxicity, and permeability under near-physiological conditions.
    Language English
    Publishing date 2024-02-12
    Publishing country United States
    Document type Journal Article
    ISSN 2168-8370
    ISSN (online) 2168-8370
    DOI 10.1080/21688370.2024.2315702
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