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  1. Article ; Online: Active Control of Contact Angles of Various Liquids from the Response of Self-Assembled Thiol Molecules to Electric Current.

    Lippert, Daniel / Burnham, Jacob / Seo, Dongjin

    Langmuir : the ACS journal of surfaces and colloids

    2023  Volume 39, Issue 14, Page(s) 5021–5030

    Abstract: The ability to change wettability in situ would realize active surfaces that can change their functionality and adapt to different environments. This article reports a new and easy method that controls surface wettability in situ. In doing so, three ... ...

    Abstract The ability to change wettability in situ would realize active surfaces that can change their functionality and adapt to different environments. This article reports a new and easy method that controls surface wettability in situ. In doing so, three hypotheses were to be proven. First, thiol molecules with dipole moments at the end that were adsorbed onto gold could change the contact angles of nonpolar or slightly polar liquids when an electric current was provided at the gold surface without having to ionize the dipole. It was also hypothesized that the molecules would undergo conformation changes as their dipoles would align with the magnetic field induced by the applied current. Second, the ability to change contact angles was modified by mixing ethanethiol, a much shorter thiol with no dipole, with the abovementioned thiol molecules because it would provide space for the thiol molecules to undergo conformation changes. Third, the indirect evidence of the conformation change was verified with attenuated total reflection Fourier transform infrared (FT-IR) spectroscopy. Four thiol molecules that controlled the contact angles of deionized water and hydrocarbon liquids were identified. The abilities of those four molecules in changing the contact angles were modified by adding ethanethiol. A quartz crystal microbalance was used to infer the possible change in the distance between the adsorbed thiol molecules by investigating adsorption kinetics. The changes in FT-IR peaks with respect to applied currents were also presented as indirect evidence for the conformation change. This method was compared with other reported methods that control wettability in situ. The differences between the voltage-driven method to induce conformation changes of thiol molecules and the method presented in this paper were further discussed to emphasize that the mechanism by which the conformation change was induced in this article was most likely because of the dipole-electric current interaction.
    Language English
    Publishing date 2023-03-27
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2005937-1
    ISSN 1520-5827 ; 0743-7463
    ISSN (online) 1520-5827
    ISSN 0743-7463
    DOI 10.1021/acs.langmuir.3c00026
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Investigation of the Trajectory of Muscle and Body Mass as a Prognostic Factor in Patients With Colorectal Cancer: Longitudinal Cohort Study.

    Seo, Dongjin / Kim, Han Sang / Ahn, Joong Bae / Park, Yu Rang

    JMIR public health and surveillance

    2023  Volume 9, Page(s) e43409

    Abstract: Background: Skeletal muscle and BMI are essential prognostic factors for survival in colorectal cancer (CRC). However, there is a lack of understanding due to scarce studies on the continuous aspects of these variables.: Objective: This study aimed ... ...

    Abstract Background: Skeletal muscle and BMI are essential prognostic factors for survival in colorectal cancer (CRC). However, there is a lack of understanding due to scarce studies on the continuous aspects of these variables.
    Objective: This study aimed to evaluate the prognostic impact of the initial status and trajectories of muscle and BMI on overall survival (OS) and assess whether these 4 profiles within 1 year can represent the profiles 6 years later.
    Methods: We analyzed 4056 newly diagnosed patients with CRC between 2010 to 2020. The volume of the muscle with 5-mm thickness at the third lumbar spine level was measured using a pretrained deep learning algorithm. The skeletal muscle volume index (SMVI) was defined as the muscle volume divided by the square of the height. The correlation between BMI status at the first, third, and sixth years of diagnosis was analyzed and assessed similarly for muscle profiles. Prognostic significances of baseline BMI and SMVI and their 1-year trajectories for OS were evaluated by restricted cubic spline analysis and survival analysis. Patients were categorized based on these 4 dimensions, and prognostic risks were predicted and demonstrated using heat maps.
    Results: Trajectories of SMVI were categorized as decreased (812/4056, 20%), steady (2014/4056, 49.7%), or increased (1230/4056, 30.3%). Similarly, BMI trajectories were categorized as decreased (792/4056, 19.5%), steady (2253/4056, 55.5%), or increased (1011/4056, 24.9%). BMI and SMVI values in the first year after diagnosis showed a statistically significant correlation with those in the third and sixth years (P<.001). Restricted cubic spline analysis showed a nonlinear relationship between baseline BMI and SMVI change ratio and OS; BMI, in particular, showed a U-shaped correlation. According to survival analysis, increased BMI (hazard ratio [HR] 0.83; P=.02), high baseline SMVI (HR 0.82; P=.04), and obesity stage 1 (HR 0.80; P=.02) showed a favorable impact, whereas decreased SMVI trajectory (HR 1.31; P=.001), decreased BMI (HR 1.23; P=.02), and initial underweight (HR 1.38; P=.02) or obesity stages 2-3 (HR 1.79; P=.01) were negative prognostic factors for OS. Considered simultaneously, BMI >30 kg/m
    Conclusions: Profiles within 1 year of both BMI and muscle were surrogate indicators for predicting the later profiles. Continuous trajectories of body and muscle mass are independent prognostic factors of patients with CRC. An automatic algorithm provides a unique opportunity to conduct longitudinal evaluations of body compositions. Further studies to understand the complicated natural courses of muscularity and adiposity are necessary for clinical application.
    MeSH term(s) Humans ; Prognosis ; Longitudinal Studies ; Retrospective Studies ; Obesity/complications ; Obesity/epidemiology ; Cohort Studies ; Muscles ; Colorectal Neoplasms/complications
    Language English
    Publishing date 2023-03-22
    Publishing country Canada
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 2369-2960
    ISSN (online) 2369-2960
    DOI 10.2196/43409
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: ASOptimizer: Optimizing antisense oligonucleotides through deep learning for IDO1 gene regulation.

    Hwang, Gyeongjo / Kwon, Mincheol / Seo, Dongjin / Kim, Dae Hoon / Lee, Daehwan / Lee, Kiwon / Kim, Eunyoung / Kang, Mingeun / Ryu, Jin-Hyeob

    Molecular therapy. Nucleic acids

    2024  Volume 35, Issue 2, Page(s) 102186

    Abstract: Recent studies have highlighted the effectiveness of using antisense oligonucleotides (ASOs) for cellular RNA regulation, including targets that are considered undruggable; however, manually designing optimal ASO sequences can be labor intensive and time ...

    Abstract Recent studies have highlighted the effectiveness of using antisense oligonucleotides (ASOs) for cellular RNA regulation, including targets that are considered undruggable; however, manually designing optimal ASO sequences can be labor intensive and time consuming, which potentially limits their broader application. To address this challenge, we introduce a platform, the ASOptimizer, a deep-learning-based framework that efficiently designs ASOs at a low cost. This platform not only selects the most efficient mRNA target sites but also optimizes the chemical modifications for enhanced performance. Indoleamine 2,3-dioxygenase 1 (IDO1) promotes cancer survival by depleting tryptophan and producing kynurenine, leading to immunosuppression through the aryl-hydrocarbon receptor (Ahr) pathway within the tumor microenvironment. We used ASOptimizer to identify ASOs that target IDO1 mRNA as potential cancer therapeutics. Our methodology consists of two stages: sequence engineering and chemical engineering. During the sequence-engineering stage, we optimized and predicted ASO sequences that could target IDO1 mRNA efficiently. In the chemical-engineering stage, we further refined these ASOs to enhance their inhibitory activity while reducing their potential cytotoxicity. In conclusion, our research demonstrates the potential of ASOptimizer for identifying ASOs with improved efficacy and safety.
    Language English
    Publishing date 2024-04-06
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2662631-7
    ISSN 2162-2531
    ISSN 2162-2531
    DOI 10.1016/j.omtn.2024.102186
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Effective Removal of Acetaldehyde Using Piperazine/Nitric Acid Co-Impregnated Bead-Type Activated Carbon.

    Kang, Yu-Jin / Kim, Yu-Jin / Yoon, Seong-Jin / Seo, Dong-Jin / Cho, Hye-Ryeong / Oh, Kyeongseok / Yoon, Seong-Ho / Park, Joo-Il

    Membranes

    2023  Volume 13, Issue 6

    Abstract: Acetaldehyde ( ... ...

    Abstract Acetaldehyde (CH
    Language English
    Publishing date 2023-06-12
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2614641-1
    ISSN 2077-0375
    ISSN 2077-0375
    DOI 10.3390/membranes13060595
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Molecular Self-Assembly and Adsorption Structure of 2,2'-Dipyrimidyl Disulfides on Au(111) Surfaces.

    Seo, Dongjin / Seong, Sicheon / Kim, Haeri / Oh, Hyun Su / Lee, Jun Hyeong / Kim, Hongki / Kim, Yeon O / Maeda, Shoichi / Chikami, Shunta / Hayashi, Tomohiro / Noh, Jaegeun

    Molecules (Basel, Switzerland)

    2024  Volume 29, Issue 4

    Abstract: The effects of solution concentration and pH on the formation and surface structure of 2-pyrimidinethiolate (2PymS) self-assembled monolayers (SAMs) on Au(111) via the adsorption of 2,2'-dipyrimidyl disulfide (DPymDS) were examined using scanning ... ...

    Abstract The effects of solution concentration and pH on the formation and surface structure of 2-pyrimidinethiolate (2PymS) self-assembled monolayers (SAMs) on Au(111) via the adsorption of 2,2'-dipyrimidyl disulfide (DPymDS) were examined using scanning tunneling microscopy (STM) and X-ray photoelectron spectroscopy (XPS). STM observations revealed that the formation and structural order of 2PymS SAMs were markedly influenced by the solution concentration and pH. 2PymS SAMs formed in a 0.01 mM ethanol solution were mainly composed of a more uniform and ordered phase compared with those formed in 0.001 mM or 1 mM solutions. SAMs formed in a 0.01 mM solution at pH 2 were composed of a fully disordered phase with many irregular and bright aggregates, whereas SAMs formed at pH 7 had small ordered domains and many bright islands. As the solution pH increased from pH 7 to pH 12, the surface morphology of 2PymS SAMs remarkably changed from small ordered domains to large ordered domains, which can be described as a (4√2 × 3)R51° packing structure. XPS measurements clearly showed that the adsorption of DPymDS on Au(111) resulted in the formation of 2PymS (thiolate) SAMs via the cleavage of the disulfide (S-S) bond in DPymDS, and most N atoms in the pyrimidine rings existed in the deprotonated form. The results herein will provide a new insight into the molecular self-assembly behaviors and adsorption structures of DPymDS molecules on Au(111) depending on solution concentration and pH.
    Language English
    Publishing date 2024-02-14
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 1413402-0
    ISSN 1420-3049 ; 1431-5165 ; 1420-3049
    ISSN (online) 1420-3049
    ISSN 1431-5165 ; 1420-3049
    DOI 10.3390/molecules29040846
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: The will to self-managing, the will to freedom

    Seo, Dongjin

    New millennium South Korea : neoliberal capitalism and transnational movements , p. 84-100

    the self-managing ethic and the spirit of flexible capitalism in South Korea

    2011  , Page(s) 84–100

    Author's details Dongjin Seo
    Keywords Volkswirtschaft ; Wirtschaftsordnung ; Marktwirtschaft ; Wirtschaftsliberalismus ; Selbstständige ; Wirtschaftsethik ; Südkorea
    Language English
    Publisher Routledge
    Publishing place London [u.a.]
    Document type Article
    ISBN 978-0-415-58265-0 ; 0-415-58265-2
    Database ECONomics Information System

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  7. Article ; Online: Pancreatoduodenectomy following neoadjuvant chemotherapy in duodenal adenocarcinoma.

    Seo, Dongjin / Park, Bo Gyeom / Jung, Dawn / Hwang, Ho Kyoung / Kim, Sung Hyun / Hong, Seung Soo / Kang, Chang Moo

    Annals of hepato-biliary-pancreatic surgery

    2022  Volume 27, Issue 1, Page(s) 114–119

    Abstract: A 51-year-old male patient had four times of massive hematochezia episode three days before arrival. Carbohydrate antigen (CA) 19-9 level was extremely elevated. Computed tomography, magnetic resonance imaging, and positron emission tomography-computed ... ...

    Abstract A 51-year-old male patient had four times of massive hematochezia episode three days before arrival. Carbohydrate antigen (CA) 19-9 level was extremely elevated. Computed tomography, magnetic resonance imaging, and positron emission tomography-computed tomography identified 5.7 cm sized periampullary duodenal cancer with regional metastatic lymph nodes and vascular invasion to aberrant right hepatic artery, main portal vein, and superior mesenteric vein. Diagnosed as duodenal adenocarcinoma through endoscopic biopsy, 16 times of FOLFIRI (5-fluorouracil, leucovorin, irinotecan) was conducted. The regimen changed to XELOX (capecitabine, oxaliplatine), four times of administration was done, and the CA19-9 level dramatically decreased. The tumor decreased to 2.1 cm. After R0 laparoscopic pylorus preserving pancreatoduodenectomy, no adjuvant therapy was given. No sign of recurrence or metastasis was reported, and the patient reached complete remission after five years. We reported a case where neoadjuvant chemotherapy for locally advanced duodenal adenocarcinoma was shown to be effective.
    Language English
    Publishing date 2022-12-20
    Publishing country Korea (South)
    Document type Case Reports
    ZDB-ID 3012179-6
    ISSN 2508-5859 ; 2508-5778
    ISSN (online) 2508-5859
    ISSN 2508-5778
    DOI 10.14701/ahbps.22-069
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: The Use of Mobile Personal Health Records for Hemoglobin A1c Regulation in Patients With Diabetes: Retrospective Observational Study.

    Seo, Dongjin / Park, Yu Rang / Lee, Yura / Kim, Ji Young / Park, Joong-Yeol / Lee, Jae-Ho

    Journal of medical Internet research

    2020  Volume 22, Issue 6, Page(s) e15372

    Abstract: Background: The effectiveness of personal health records (PHRs) in diabetes management has already been verified in several clinical trials; however, evidence of their effectiveness in real-world scenarios is also necessary. To provide solid real-world ... ...

    Abstract Background: The effectiveness of personal health records (PHRs) in diabetes management has already been verified in several clinical trials; however, evidence of their effectiveness in real-world scenarios is also necessary. To provide solid real-world evidence, an analysis that is more accurate than the analyses solely based on patient-generated health data should be conducted.
    Objective: This study aimed to conduct a more accurate analysis of the effectiveness of using PHRs within electronic medical records (EMRs). The results of this study will provide precise real-world evidence of PHRs as a feasible diabetes management tool.
    Methods: We collected log data of the sugar function in the My Chart in My Hand version 2.0 (MCMH 2.0) app from Asan Medical Center (AMC), Seoul, Republic of Korea, between December 2015 and April 2018. The EMR data of MCMH 2.0 users from AMC were collected and integrated with the PHR data. We classified users according to whether they were continuous app users. We analyzed and compared their characteristics, patterns of hemoglobin A
    Results: The total number of MCMH 2.0 users was 64,932, with 7453 users having appropriate PHRs and diabetes criteria. The number of continuous and noncontinuous users was 133 and 7320, respectively. Compared with noncontinuous users, continuous users were younger (P<.001) and had a higher male proportion (P<.001). Furthermore, continuous users had more frequent HbA
    Conclusions: By integrating and analyzing patient- and clinically generated data, we demonstrated that the continuous use of PHRs improved diabetes management outcomes. In addition, the HbA
    MeSH term(s) Diabetes Mellitus/diagnosis ; Electronic Health Records/standards ; Female ; Glycated Hemoglobin A/analysis ; Health Records, Personal ; Humans ; Male ; Middle Aged ; Retrospective Studies
    Chemical Substances Glycated Hemoglobin A
    Language English
    Publishing date 2020-06-02
    Publishing country Canada
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2028830-X
    ISSN 1438-8871 ; 1439-4456
    ISSN (online) 1438-8871
    ISSN 1439-4456
    DOI 10.2196/15372
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Molecular Characteristics of Catalytic Nitrogen Removal from Coal Tar Pitch over γ-Alumina-Supported NiMo and CoMo Catalysts.

    Choi, Kyoung-Hwan / Seo, Dong-Jin / Kim, Yu-Jin / Cho, San-Seong / Han, Yu-Jin / Yang, Inchan / Kim, Chel-Woo / Oh, Kyeongseok / An, Jung-Chul / Park, Joo-Il

    International journal of molecular sciences

    2023  Volume 24, Issue 14

    Abstract: The removal of nitrogen from coal tar pitch (CTP) through the hydrodenitrogenation (HDN) of CTP and its molecular behavior were evaluated in the presence of NiMo/γ-alumina and CoMo/γ-alumina catalysts. Fourier transform ion cyclotron resonance mass ... ...

    Abstract The removal of nitrogen from coal tar pitch (CTP) through the hydrodenitrogenation (HDN) of CTP and its molecular behavior were evaluated in the presence of NiMo/γ-alumina and CoMo/γ-alumina catalysts. Fourier transform ion cyclotron resonance mass spectrometry with atmospheric pressure photoionization was used to analyze the complicated chemical classes and species of CTP and the treated products at the molecular level. Nitrogen species were qualitatively analyzed before and after hydrotreatment. A single-stage hydrotreatment with an HDN catalyst resulted in a high sulfur removal performance (85.6-94.7%) but a low nitrogen removal performance (26.8-29.2%). Based on relative abundance analyses of nitrogen and binary nitrogen species, C
    MeSH term(s) Coal Tar ; Nitrogen/chemistry ; Aluminum Oxide ; Denitrification ; Mass Spectrometry/methods
    Chemical Substances Coal Tar (8007-45-2) ; Nitrogen (N762921K75) ; Aluminum Oxide (LMI26O6933)
    Language English
    Publishing date 2023-07-22
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms241411793
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: In Situ control of gas flow by modification of gas-solid interactions.

    Seo, Dongjin / Ducker, William A

    Physical review letters

    2013  Volume 111, Issue 17, Page(s) 174502

    Abstract: The boundary condition for gas flow at the solid-gas interface can be altered by in situ control of the state of a thin film adsorbed to the solid. A monolayer of ocatadecyltrichlorosilane (OTS) reversibly undergoes a meltinglike transition. When the ... ...

    Abstract The boundary condition for gas flow at the solid-gas interface can be altered by in situ control of the state of a thin film adsorbed to the solid. A monolayer of ocatadecyltrichlorosilane (OTS) reversibly undergoes a meltinglike transition. When the temperature of an OTS-coated particle and plate is moved through the range of OTS "melting" temperatures, there is a change in the lubrication force between the particle and plate in 1 atm of nitrogen gas. This change is interpreted in terms of a change in the flow of gas mediated by the slip length and tangential momentum accommodation coefficient (TMAC). There is a minimum in slip length (290 nm) at 18 °C, which corresponds to a maximum in TMAC (0.44). The slip length increases to 590 nm at 40 °C which corresponds to a TMAC of 0.25. We attribute the decrease in TMAC with increasing temperature to a decrease in roughness of the monolayer on melting, which allows a higher fraction of specular gas reflections, thereby conserving tangential gas momentum. The importance of this work is that it demonstrates the ability to control gas flow simply by altering the interface for fixed geometry and gas properties.
    Language English
    Publishing date 2013-10-25
    Publishing country United States
    Document type Journal Article
    ZDB-ID 208853-8
    ISSN 1079-7114 ; 0031-9007
    ISSN (online) 1079-7114
    ISSN 0031-9007
    DOI 10.1103/PhysRevLett.111.174502
    Database MEDical Literature Analysis and Retrieval System OnLINE

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