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  1. Article ; Online: Dynamic changes in lung water density and volume following supine body positioning.

    Goodhart, Thomas / Seres, Peter / Grenier, Justin / Keen, Christopher / Stobbe, Rob / Thompson, Richard B

    Magnetic resonance in medicine

    2024  Volume 91, Issue 6, Page(s) 2612–2620

    Abstract: Purpose: Measure the changes in relative lung water density (rLWD), lung volume, and total lung water content as a function of time after supine body positioning.: Methods: An efficient ultrashort-TE pulse sequence with a yarnball k-space trajectory ... ...

    Abstract Purpose: Measure the changes in relative lung water density (rLWD), lung volume, and total lung water content as a function of time after supine body positioning.
    Methods: An efficient ultrashort-TE pulse sequence with a yarnball k-space trajectory was used to measure water density-weighted lung images for 25 min following supine body positioning (free breathing, 74-s acquisitions, 3D images at functional residual capacity, 18 time points) in 9 healthy volunteers. Global and regional (10 chest-to-back positions) rLWD, lung volume, and total lung water volume were measured in all subjects at all time points. Volume changes were validated with a nitrogen washout study in 3 participants.
    Results: Global rLWD increased significantly (p = 0.001) from 31.8 ± 5.5% to 34.8 ± 6.8%, while lung volumes decreased significantly (p < 0.001) from 2390 ± 620 mL to 2130 ± 630 mL over the same 25-min interval. Total lung water volume decreased slightly from 730 ± 125 mL to 706 ± 126 mL (p = 0.028). There was a significant chest-to-back gradient in rLWD (20.7 ± 4.6% to 39.9 ± 6.1%) at all time points with absolute increases of 1.8 ± 1.2% at the chest and 5.4 ± 1.9% at the back. Nitrogen washout studies yielded a similar reduction in lung volume (12.5 ± 0.9%) and time course following supine positioning.
    Conclusion: Lung volumes during tidal breathing decrease significantly over tens of minutes following supine body positioning, with corresponding increases in lung water density (9.2 ± 4.4% relative increase). The total volume of lung water is slightly reduced over this interval (3.3 ± 4.0% relative change). Evaluation of rLWD should take time after supine positioning, and more generally, all sources of lung volume changes should be taken into consideration to avoid significant bias.
    MeSH term(s) Humans ; Patient Positioning ; Lung/diagnostic imaging ; Lung Volume Measurements ; Respiration ; Nitrogen ; Supine Position
    Chemical Substances Nitrogen (N762921K75)
    Language English
    Publishing date 2024-01-21
    Publishing country United States
    Document type Journal Article
    ZDB-ID 605774-3
    ISSN 1522-2594 ; 0740-3194
    ISSN (online) 1522-2594
    ISSN 0740-3194
    DOI 10.1002/mrm.30017
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  2. Article ; Online: Signal-to-noise ratio penalties from a loss of stimulated echoes when using slab-selective excitation in three-dimensional fast spin echo imaging with long echo trains.

    Snyder, Jeff / Seres, Peter / Wilman, Alan H

    NMR in biomedicine

    2022  Volume 36, Issue 5, Page(s) e4881

    Abstract: Three-dimensional fast spin echo imaging with long echo trains combines high resolution with reasonable acquisition times and reduced specific absorption rate due to low refocusing flip angles. Typically, an entire volume is encoded (nonselective ... ...

    Abstract Three-dimensional fast spin echo imaging with long echo trains combines high resolution with reasonable acquisition times and reduced specific absorption rate due to low refocusing flip angles. Typically, an entire volume is encoded (nonselective excitation) or localization can be performed with slab select excitation, which uses a long 90° pulse for precise localization, followed by a preliminary nonselective 180° pulse bounded by spoiler gradients to destroy signal outside of the volume of interest. Subsequent flip angles in the train are nonselective and identical between the two methods. The inclusion of the initial selective pulse and spoiler gradients results in a signal-to-noise ratio (SNR) penalty for slab selection, beyond the slice-averaging dependence, arising from a loss of stimulated echoes. SNR differences are explored using Bloch equation simulations of a T2-weighted 96 echo train sequence with varying parameters including T2, T1, and B1
    MeSH term(s) Signal-To-Noise Ratio ; Imaging, Three-Dimensional/methods ; Brain/diagnostic imaging ; Brain/anatomy & histology ; Echo-Planar Imaging/methods ; Image Enhancement/methods ; Magnetic Resonance Imaging/methods
    Language English
    Publishing date 2022-12-29
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1000976-0
    ISSN 1099-1492 ; 0952-3480
    ISSN (online) 1099-1492
    ISSN 0952-3480
    DOI 10.1002/nbm.4881
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  3. Article ; Online: Reference Values for Water-Specific T1 of the Liver at 3 T: T2*-Compensation and the Confounding Effects of Fat.

    Thompson, Richard B / Sherrington, Rachel / Beaulieu, Christian / Kirkham, Amy / Paterson, David I / Seres, Peter / Grenier, Justin

    Journal of magnetic resonance imaging : JMRI

    2024  

    Abstract: Background: T1 mapping of the liver is confounded by the presence of fat. Multiparametric T1 mapping combines fat-water separation with T1-weighting to enable imaging of water-specific T1 (T1: Purpose: Determine normative values for T1: Study type!# ...

    Abstract Background: T1 mapping of the liver is confounded by the presence of fat. Multiparametric T1 mapping combines fat-water separation with T1-weighting to enable imaging of water-specific T1 (T1
    Purpose: Determine normative values for T1
    Study type: Prospective observational; phantoms.
    Populations: One hundred twenty-four controls (56 male, 18-75 years), 50 patients at-risk for liver disease (18 male, 30-76 years).
    Field strength/sequence: 2.89 T; Saturation-recovery chemical-shift encoded T1 Mapping (SR-CSE); MOLLI.
    Assessment: SR-CSE provided T1
    Statistical tests: Linear regression, ANCOVA, t-test, Bland and Altman, intraclass correlation coefficient (ICC). P < 0.05 was considered statistically significant.
    Results: Liver T1 values were significantly higher in healthy females (F) than males (M) for both SR-CSE (F-973 ± 78 msec, M-930 ± 72 msec) and MOLLI (F-802 ± 55 msec, M-759 ± 69 msec). T1 values were negatively correlated with age, with similar sex- and age-dependencies observed in T2*. The T2*-compensation model reduced the variability of T1 values by half and removed sex- and age-differences (SR-CSE: F-946 ± 36 msec, M-941 ± 43 msec; MOLLI: F-775 ± 35 msec, M-770 ± 35 msec). At-risk participants had elevated PDFF and T1 values, which became more distinct from the healthy cohort after T2*-compensation. MOLLI systematically underestimated liver T1 values by ~170 msec with an additional positive T1-bias from fat content (~11 msec/1% in PDFF). Reproducibility ICC values were ≥0.96 for all parameters.
    Data conclusion: Liver T1
    Evidence level: 2 TECHNICAL EFFICACY: Stage 1.
    Language English
    Publishing date 2024-02-02
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1146614-5
    ISSN 1522-2586 ; 1053-1807
    ISSN (online) 1522-2586
    ISSN 1053-1807
    DOI 10.1002/jmri.29262
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  4. Article ; Online: The impact of matching for reproductive status on the comparison of magnetic spectroscopic measurements of glutamate and gamma-aminobutyric acid + in the medial prefrontal cortex of women with major depression.

    Tran, Kim H / Luki, Jessica / Hanstock, Sarah / Hanstock, Christopher C / Seres, Peter / Aitchison, Katherine / Shandro, Tami / Le Melledo, Jean-Michel

    Journal of affective disorders

    2024  Volume 351, Page(s) 396–402

    Abstract: Objectives: The role played by medial prefrontal cortex (MPFC) glutamate (Glu) and gamma-aminobutyric acid (GABA) in the pathophysiology and the treatment of major depression (MD) is increasingly recognized. Although measurements of MPFC GABA and Glu ... ...

    Abstract Objectives: The role played by medial prefrontal cortex (MPFC) glutamate (Glu) and gamma-aminobutyric acid (GABA) in the pathophysiology and the treatment of major depression (MD) is increasingly recognized. Although measurements of MPFC GABA and Glu have been shown to be sensitive to physiological fluctuations of female hormones, none of the magnetic resonance spectroscopy (MRS) investigations of MPFC Glu and GABA in MD have controlled for possible bias effect of the reproductive stage of the women included.
    Methods: MPFC Glu and GABA+ (which include homocarnosine and macromolecules) referenced to creatine and phosphocreatine, were measured via magnetic resonance spectroscopy (MRS) using a 3-Tesla magnet in 24 women with MD and 24 healthy women paired for reproductive status. All participants were unmedicated.
    Results: There were no statistical differences in either MPFC Glu [95 % CI: (-0.025, 0.034)] or MPFC GABA+ [95 % CI: (-0.005, 0.017)] between women with MD and healthy controls.
    Conclusions: Our investigation does not support abnormalities in measurement of MPFC Glu and GABA in MD women when stringent control for reproductive status is performed. As a result of the inherent limitations of MRS methodology, our results do not preclude glutamatergic and GABAergic dysregulations in the MPFC of women with MD.
    MeSH term(s) Female ; Humans ; Glutamic Acid ; Depressive Disorder, Major/drug therapy ; Depression ; Prefrontal Cortex/diagnostic imaging ; gamma-Aminobutyric Acid
    Chemical Substances Glutamic Acid (3KX376GY7L) ; gamma-Aminobutyric Acid (56-12-2)
    Language English
    Publishing date 2024-01-19
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 135449-8
    ISSN 1573-2517 ; 0165-0327
    ISSN (online) 1573-2517
    ISSN 0165-0327
    DOI 10.1016/j.jad.2024.01.140
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  5. Article ; Online: Selective Effects of Healthy Cognitive Aging and Catechol-

    Aghamohammadi-Sereshki, Arash / Olsen, Fraser / Seres, Peter / Malykhin, Nikolai V

    Brain connectivity

    2021  Volume 12, Issue 2, Page(s) 146–163

    Abstract: Introduction: ...

    Abstract Introduction:
    MeSH term(s) Adolescent ; Adult ; Aged ; Aged, 80 and over ; Brain/pathology ; Catechol O-Methyltransferase/genetics ; Catechols ; Cognitive Aging ; Diffusion Tensor Imaging ; Healthy Aging ; Humans ; Methionine ; Middle Aged ; Polymorphism, Genetic ; Valine ; White Matter/diagnostic imaging ; White Matter/pathology ; Young Adult
    Chemical Substances Catechols ; Methionine (AE28F7PNPL) ; COMT protein, human (EC 2.1.1.6) ; Catechol O-Methyltransferase (EC 2.1.1.6) ; Valine (HG18B9YRS7)
    Language English
    Publishing date 2021-06-29
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2609017-X
    ISSN 2158-0022 ; 2158-0014
    ISSN (online) 2158-0022
    ISSN 2158-0014
    DOI 10.1089/brain.2020.0919
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  6. Article ; Online: Decreased GABA+ ratios referenced to creatine and phosphocreatine in the left dorsolateral prefrontal cortex of females of reproductive age with major depression.

    Tran, Kim H / Luki, Jessica / Hanstock, Sarah / Hanstock, Christopher C / Seres, Peter / Aitchison, Katherine / Le Melledo, Jean-Michel

    Journal of psychiatry & neuroscience : JPN

    2023  Volume 48, Issue 4, Page(s) E285–E294

    Abstract: Background: It has been suggested that the dorsolateral prefrontal cortex (DLPFC), especially the left DLPFC, has an important role in the pathophysiology and the treatment of major depressive disorder (MDD); furthermore, the contributory and ... ...

    Abstract Background: It has been suggested that the dorsolateral prefrontal cortex (DLPFC), especially the left DLPFC, has an important role in the pathophysiology and the treatment of major depressive disorder (MDD); furthermore, the contributory and antidepressant role of γ-aminobutyric acid (GABA) is increasingly recognized. Given that most female patients with MDD are of reproductive age, we sought to assess in vivo baseline GABA levels in the left DLPFC among unmedicated females of reproductive age with depression.
    Methods: We compared healthy females and females with MDD. Both groups were of reproductive age. We confirmed absence of current or past psychiatric diagnosis among healthy controls or a current diagnosis of MDD via a structured interview. We measured GABA+ (including homocarnosine and macromolecules), referenced to creatine and phosphocreatine, via magnetic resonance spectroscopy using a 3 Tesla magnet.
    Results: We included 20 healthy controls and 13 participants with MDD. All participants were unmedicated at the time of the study. All females were scanned during the early follicular phase of the menstrual cycle. Levels of GABA+ in the left DLPFC were significantly lower among participants with MDD (median 0.08) than healthy controls (median 0.10;
    Limitations: When we adjusted for fit error as a covariate, we lost statistical significance for left DLPFC GABA+. However, when we adjusted for signal-to-noise ratio, statistical significance was maintained.
    Conclusion: Our results suggest that GABA+ levels in the left DLPFC may vary by depression status and should be examined as a possible treatment target.
    MeSH term(s) Humans ; Female ; Creatine ; Phosphocreatine ; Depressive Disorder, Major/diagnostic imaging ; Dorsolateral Prefrontal Cortex ; Depression
    Chemical Substances Creatine (MU72812GK0) ; Phosphocreatine (020IUV4N33)
    Language English
    Publishing date 2023-08-22
    Publishing country Canada
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1077443-9
    ISSN 1488-2434 ; 1180-4882
    ISSN (online) 1488-2434
    ISSN 1180-4882
    DOI 10.1503/jpn.230016
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  7. Article ; Online: Effect of lower body negative pressure on cardiac and cerebral function in postural orthostatic tachycardia syndrome: A pilot MRI assessment.

    Skow, Rachel J / Foulkes, Stephen J / Seres, Peter / Freer, Meghan A / Mathieu, Eric D / Raj, Satish R / Thompson, Richard B / Haykowsky, Mark H / Richer, Lawrence

    Physiological reports

    2024  Volume 12, Issue 6, Page(s) e15979

    Abstract: Postural orthostatic tachycardia syndrome (POTS) is characterized by an excessive heart rate (HR) response upon standing and symptoms indicative of inadequate cerebral perfusion. We tested the hypothesis that during lower body negative pressure (LBNP), ... ...

    Abstract Postural orthostatic tachycardia syndrome (POTS) is characterized by an excessive heart rate (HR) response upon standing and symptoms indicative of inadequate cerebral perfusion. We tested the hypothesis that during lower body negative pressure (LBNP), individuals with POTS would have larger decreases in cardiac and cerebrovascular function measured using magnetic resonance (MR) imaging. Eleven patients with POTS and 10 healthy controls were studied at rest and during 20 min of -25 mmHg LBNP. Biventricular volumes, stroke volume (SV), cardiac output (Qc), and HR were determined by cardiac MR. Cerebral oxygen uptake (VO
    MeSH term(s) Humans ; Postural Orthostatic Tachycardia Syndrome/diagnostic imaging ; Lower Body Negative Pressure ; Cardiac Output/physiology ; Cerebrovascular Circulation/physiology ; Heart Rate/physiology ; Blood Pressure/physiology
    Language English
    Publishing date 2024-03-15
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2724325-4
    ISSN 2051-817X ; 2051-817X
    ISSN (online) 2051-817X
    ISSN 2051-817X
    DOI 10.14814/phy2.15979
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  8. Article ; Online: MR Susceptibility Separation for Quantifying Lesion Paramagnetic and Diamagnetic Evolution in Relapsing-Remitting Multiple Sclerosis.

    Zhu, Ziyan / Naji, Nashwan / Esfahani, Javad Hamidi / Snyder, Jeff / Seres, Peter / Emery, Derek J / Noga, Michelle / Blevins, Gregg / Smyth, Penelope / Wilman, Alan H

    Journal of magnetic resonance imaging : JMRI

    2024  

    Abstract: Background: Multiple sclerosis (MS) lesion evolution may involve changes in diamagnetic myelin and paramagnetic iron. Conventional quantitative susceptibility mapping (QSM) can provide net susceptibility distribution, but not the discrete paramagnetic ... ...

    Abstract Background: Multiple sclerosis (MS) lesion evolution may involve changes in diamagnetic myelin and paramagnetic iron. Conventional quantitative susceptibility mapping (QSM) can provide net susceptibility distribution, but not the discrete paramagnetic and diamagnetic components.
    Purpose: To apply susceptibility separation (χ separation) to follow lesion evolution in MS with comparison to R
    Study type: Longitudinal, prospective.
    Subjects: Twenty relapsing-remitting MS subjects (mean age: 42.5 ± 9.4 years, 13 females; mean years of symptoms: 4.3 ± 1.4 years).
    Field strength/sequence: Three-dimensional multiple echo gradient echo (QSM and R
    Assessment: Data were analyzed from two scans separated by a mean interval of 14.4 ± 2.0 months. White matter lesions on fluid-attenuated inversion recovery were defined by an automatic pipeline, then manually refined (by ZZ/AHW, 3/25 years' experience in MRI), and verified by a radiologist (MN, 25 years' experience in MS). Susceptibility separation yielded the paramagnetic and diamagnetic susceptibility content of each voxel. Lesions were classified into four groups based on the variation of QSM/R
    Statistical tests: Two-sample paired t tests for assessment of longitudinal differences. Spearman correlation coefficients to assess associations between χ separation and R
    Results: A total of 183 lesions were quantified. Categorizing lesions into groups based on χ separation demonstrated significant annual changes in QSM//R
    Data conclusion: Susceptibility separation changes in MS lesions may distinguish and quantify paramagnetic and diamagnetic evolution, potentially providing additional insight compared to R
    Level of evidence: 2 TECHNICAL EFFICACY: Stage 2.
    Language English
    Publishing date 2024-02-02
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1146614-5
    ISSN 1522-2586 ; 1053-1807
    ISSN (online) 1522-2586
    ISSN 1053-1807
    DOI 10.1002/jmri.29266
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  9. Article ; Online: Characterization of B

    MacLennan, Thomas / Seres, Peter / Rickard, Julia / Stolz, Emily / Beaulieu, Christian / Wilman, Alan H

    Magnetic resonance in medicine

    2021  Volume 87, Issue 2, Page(s) 960–971

    Abstract: Purpose: The transmit field : Methods: Bloch-Siegert : Results: The voxel-based mean coefficient of variation was 4.0% across all subjects, and the difference in : Conclusion: In standard atlas space, ... ...

    Abstract Purpose: The transmit field
    Methods: Bloch-Siegert
    Results: The voxel-based mean coefficient of variation was 4.0% across all subjects, and the difference in
    Conclusion: In standard atlas space, intersubject
    MeSH term(s) Brain/diagnostic imaging ; Brain Mapping ; Calibration ; Female ; Humans ; Longevity ; Magnetic Resonance Imaging ; Male
    Language English
    Publishing date 2021-09-21
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 605774-3
    ISSN 1522-2594 ; 0740-3194
    ISSN (online) 1522-2594
    ISSN 0740-3194
    DOI 10.1002/mrm.29011
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  10. Book ; Online: Deep Connection

    Oliver, Marilene / Joynes, Gary James / Punithakumar, Kumar / Seres, Peter

    Making Virtual Reality Artworks with Medical Scan Data

    2021  

    Abstract: Deep Connection is an installation and virtual reality artwork made using full body 3D and 4D magnetic resonance scan datasets. When the user enters Deep Connection, they see a scanned body lying prone in mid-air. The user can walk around the body and ... ...

    Abstract Deep Connection is an installation and virtual reality artwork made using full body 3D and 4D magnetic resonance scan datasets. When the user enters Deep Connection, they see a scanned body lying prone in mid-air. The user can walk around the body and inspect it. The user can dive inside and see its inner workings, its lungs, spine, brain. The user can take hold of the figure's outstretched hand: holding the hand triggers the 4D dataset, making the heart beat and the lungs breathe. When the user lets go of the hand, the heart stops beating and the lungs stop breathing. Deep Connection creates a scenario where an embodied human becomes the companion for a virtual body. This paper maps the conceptual and theoretical framework for Deep Connection such as virtual intimacy and digital mediated companionship. It also reflects on working with scanned bodies more generally in virtual reality by discussing transparency, the cyberbody versus the data body, as well as data privacy and data ethics. The paper also explains the technical and procedural aspects of the Deep Connection project with respect to acquiring scan data for the creation of virtual reality artworks.

    Comment: 8 pages, 15 figures, submitted to VISAP 2021
    Keywords Computer Science - Multimedia ; Computer Science - Human-Computer Interaction
    Subject code 700
    Publishing date 2021-09-30
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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