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  1. Article: Exogenous dehydrin NnRab18 improves the Arabidopsis cryopreservation by affecting ROS metabolism and protecting antioxidase activities

    Sheng, Jiangyuan / Liu, Tao / Zhang, Di

    In vitro cellular & developmental biology. 2022 Aug., v. 58, no. 4

    2022  

    Abstract: Seeds usually dehydrate and reach a vitrification state during maturation, conferring stress tolerance and storage tolerance on mature seeds. Late embryogenesis abundant (LEA) proteins accumulate and play multiple protective roles in this process. In ... ...

    Abstract Seeds usually dehydrate and reach a vitrification state during maturation, conferring stress tolerance and storage tolerance on mature seeds. Late embryogenesis abundant (LEA) proteins accumulate and play multiple protective roles in this process. In this study, recombinant dehydrin NnRab18 of LEA family from Nelumbo nucifera seeds was added into loading solution and plant vitrification solution (PVS2) to verify the optimization effect of NnRab18 on plant cryopreservation. The NnRab18-optimized method approximately doubled the survival rate of Arabidopsis thaliana L. seedlings, and the survival rates were linearly dependent on concentrations of exogenous NnRab18 protein. Evans blue staining revealed that NnRab18 alleviated the plasma membrane damages of seedling roots. In the NnRab18-optimized group, OH· scavenging activity was increased by 50.0%, and H₂O₂ and malondialdehyde contents were decreased by 9.3% and 29.7%, respectively. Quantitative gene expression analysis showed that oxidative stress–related genes including oxidative signal-inducible 1 (OXI1), Cu/Zn superoxide dismutase (Cu/Zn SOD), catalase2 (CAT2), CAT3, monodehydroascorbate reductase (MDHAR), glutathione reductase 1 (GR1), and glutathione peroxidase 6 (GPX6) were significantly downregulated in the NnRab18-optimized group. Additionally, the Cu/Zn SOD, POD, and CAT activities of the NnRab18-optimized group were 25.0%, 16.2%, and 30.1% higher than those of the control group, respectively. NnRab18 addition alleviated L-Lactate dehydrogenase inactivation in the in vitro enzyme activity protection assay, demonstrating that NnRab18 can directly protect enzyme activity during cryopreservation. This study suggests that NnRab18 can improve the cryopreservation efficiency by affecting ROS metabolism and signal transduction, alleviating plasma membrane peroxidation, and protecting antioxidase activities.
    Keywords Arabidopsis thaliana ; Nelumbo nucifera ; cryopreservation ; dehydrins ; embryogenesis ; enzyme activity ; gene expression ; glutathione peroxidase ; glutathione-disulfide reductase ; lactate dehydrogenase ; malondialdehyde ; metabolism ; monodehydroascorbate reductase (NADH) ; peroxidation ; plasma membrane ; seedlings ; signal transduction ; stress tolerance ; superoxide dismutase ; survival rate ; vitrification
    Language English
    Dates of publication 2022-08
    Size p. 530-539.
    Publishing place Springer US
    Document type Article
    ISSN 1054-5476
    DOI 10.1007/s11627-022-10254-z
    Database NAL-Catalogue (AGRICOLA)

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  2. Article: Gibberellins, brassinolide, and ethylene signaling were involved in flower differentiation and development in Nelumbo nucifera

    Sheng, Jiangyuan / Li, Xin / Zhang, Di

    Chinese Society for Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS) Horticultural plant journal. 2021 June 04,

    2021  

    Abstract: Hormones play important roles in vegetative and reproductive processes; however, the regulatory roles of hormones in Nelumbo nucifera (Lotus) growth and development are unclear. In this study, nine types of endogenous hormones, including gibberellins (GA₁ ...

    Abstract Hormones play important roles in vegetative and reproductive processes; however, the regulatory roles of hormones in Nelumbo nucifera (Lotus) growth and development are unclear. In this study, nine types of endogenous hormones, including gibberellins (GA₁, GA₃, and GA₄), indole-3-acetic acid (IAA), brassinolide (BR), ethylene (ETH), jasmonic acid (JA), abscisic acid (ABA), and zeatin (ZT) were detected in dormant shoot tips, vegetative shoot tips, developing leaf buds, and developing flower buds of lotus. The results indicated that GA, ETH, and BR signaling can promote vegetative and reproductive development of lotus. GA signaling regulates plant height and stimulates flower bud differentiation. GA levels were the highest in the flower buds; exogenous GA₃₊₄ increased plant height by approximately 90%, increased flower quantity by nearly 40%, and advanced flowering by 4 d. Suppressing GA biosynthesis using paclobutrazol decreased plant height and flower quantity by 38% and 87.1%, respectively, and delayed flowering by 15.6 d. ETH signaling has positive regulatory effects on vegetative growth and flower development. The ETH concentration in the developing leaf buds was at least 50% higher than that in other samples. Ethephon spraying led to remarkable increases in plant height and leaf thickness and extended the flowering duration. BR signaling acts as a growth promoter during vegetative and reproductive development in lotus. The highest BR levels were detected in the vegetative shoot tips. External application of 28-epihomobrassinolide resulted in growth-promoting phenotypes including longer scapes, thicker leaves, and prolonged flowering.
    Keywords Lotus ; Nelumbo nucifera ; abscisic acid ; biosynthesis ; brassinolide ; ethephon ; ethylene ; flower buds ; flowers ; growth promotion ; horticultural crops ; indole acetic acid ; jasmonic acid ; leaf thickness ; leaves ; paclobutrazol ; plant height ; vegetative growth ; zeatin
    Language English
    Dates of publication 2021-0604
    Publishing place Elsevier B.V.
    Document type Article
    Note Pre-press version
    ISSN 2468-0141
    DOI 10.1016/j.hpj.2021.06.002
    Database NAL-Catalogue (AGRICOLA)

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  3. Article ; Online: Comparative transcriptomic and proteomic profiling reveals molecular models of light signal regulation of shade tolerance in bowl lotus (Nelumbo nucifera).

    Sheng, Jiangyuan / Wang, Gongda / Liu, Tao / Xu, Zheng / Zhang, Di

    Journal of proteomics

    2021  Volume 257, Page(s) 104455

    Abstract: Bowl lotus is categorized as a heliophyte, and shaded environments can severely retard its development and blossoming. We conducted a comparative omics study of light response difference between two cultivars, 'HongYunDieYing' (shade tolerant) and ' ... ...

    Abstract Bowl lotus is categorized as a heliophyte, and shaded environments can severely retard its development and blossoming. We conducted a comparative omics study of light response difference between two cultivars, 'HongYunDieYing' (shade tolerant) and 'YingYing' (shade intolerant), to understand the mechanisms behind the shade tolerance response. The results indicated that 'HongYunDieYing' had a faster light signal response than that in 'YingYing'. Furthermore, 214 proteins in 'HongYunDieYing' and 171 proteins in 'YingYing' were differentially expressed at both the transcriptional and protein levels. These correlated members were mainly involved in photosynthesis, metabolism, secondary metabolites, ribosome, and protein biosynthesis. However, glycolysis/gluconeogenesis, carbon metabolism, fatty acid metabolism, glutathione metabolism, and hormone signaling, were unique to 'HongYunDieYing'. The molecular model of light signal regulation of shade tolerance was constructed: the upstream light signal transduction related gene (cryptochrome 1, phytohormone B, phytochrome-interacting factor 3/5, ELONGATED HYPOCOTYL 5, and SUPPRESSOR OF PHYA-1) played a decisive role in regulating shade tolerance traits. Some transcription factors (MYBs, bHLHs and WRKYs) and hormone signaling (auxin, gibberellin and ethylene) were involved in mediating light signaling to regulate downstream biological events. These regulators and biological processes synergistically regulated the shade tolerance of lotus. SIGNIFICANCE: Lotus requires sufficient sunlight for growth and development, and shaded environments will severely retard lotus growth and blossoming. At present, there are few reports on the systematic identification and characterization of light signal response-related regulators in lotus. This study focuses on the comparative analysis two bowl lotus cultivars with the different shade tolerance traits at transcriptome and proteome levels to uncover the novel insight of the light signal-related biological network and potential candidates involved in the mechanism. The results provide a theoretical basis for the bowl lotus breeding and the expansion of its applications.
    MeSH term(s) Gene Expression Regulation, Plant ; Hormones ; Lotus/genetics ; Lotus/metabolism ; Models, Molecular ; Nelumbo/genetics ; Nelumbo/metabolism ; Plant Breeding ; Proteomics ; Transcription Factors/metabolism ; Transcriptome
    Chemical Substances Hormones ; Transcription Factors
    Language English
    Publishing date 2021-12-17
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2400835-7
    ISSN 1876-7737 ; 1874-3919
    ISSN (online) 1876-7737
    ISSN 1874-3919
    DOI 10.1016/j.jprot.2021.104455
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: TMT-Based Quantitative Proteomic Analysis Reveals the Physiological Regulatory Networks of Embryo Dehydration Protection in Lotus (

    Zhang, Di / Liu, Tao / Sheng, Jiangyuan / Lv, Shan / Ren, Li

    Frontiers in plant science

    2021  Volume 12, Page(s) 792057

    Abstract: Lotus is an aquatic plant that is sensitive to water loss, but its seeds are longevous after seed embryo dehydration and maturation. The great difference between the responses of vegetative organs and seeds to dehydration is related to the special ... ...

    Abstract Lotus is an aquatic plant that is sensitive to water loss, but its seeds are longevous after seed embryo dehydration and maturation. The great difference between the responses of vegetative organs and seeds to dehydration is related to the special protective mechanism in embryos. In this study, tandem mass tags (TMT)-labeled proteomics and parallel reaction monitoring (PRM) technologies were used to obtain novel insights into the physiological regulatory networks during lotus seed dehydration process. Totally, 60,266 secondary spectra and 32,093 unique peptides were detected. A total of 5,477 proteins and 815 differentially expressed proteins (DEPs) were identified based on TMT data. Of these, 582 DEPs were continuously downregulated and 228 proteins were significantly up-regulated during the whole dehydration process. Bioinformatics and protein-protein interaction network analyses indicated that carbohydrate metabolism (including glycolysis/gluconeogenesis, galactose, starch and sucrose metabolism, pentose phosphate pathway, and cell wall organization), protein processing in ER, DNA repair, and antioxidative events had positive responses to lotus embryo dehydration. On the contrary, energy metabolism (metabolic pathway, photosynthesis, pyruvate metabolism, fatty acid biosynthesis) and secondary metabolism (terpenoid backbone, steroid, flavonoid biosynthesis) gradually become static status during lotus embryo water loss and maturation. Furthermore, non-enzymatic antioxidants and pentose phosphate pathway play major roles in antioxidant protection during dehydration process in lotus embryo. Abscisic acid (ABA) signaling and the accumulation of oligosaccharides, late embryogenesis abundant proteins, and heat shock proteins may be the key factors to ensure the continuous dehydration and storage tolerance of lotus seed embryo. Stress physiology detection showed that H
    Language English
    Publishing date 2021-12-17
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2613694-6
    ISSN 1664-462X
    ISSN 1664-462X
    DOI 10.3389/fpls.2021.792057
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Comparative transcriptomic and proteomic profiling reveals molecular models of light signal regulation of shade tolerance in bowl lotus (Nelumbo nucifera)

    Sheng, Jiangyuan / Wang, Gongda / Liu, Tao / Xu, Zheng / Zhang, Di

    Journal of Proteomics. 2022 Apr., v. 257 p.104455-

    2022  

    Abstract: Bowl lotus is categorized as a heliophyte, and shaded environments can severely retard its development and blossoming. We conducted a comparative omics study of light response difference between two cultivars, ‘HongYunDieYing’ (shade tolerant) and ‘ ... ...

    Abstract Bowl lotus is categorized as a heliophyte, and shaded environments can severely retard its development and blossoming. We conducted a comparative omics study of light response difference between two cultivars, ‘HongYunDieYing’ (shade tolerant) and ‘YingYing’ (shade intolerant), to understand the mechanisms behind the shade tolerance response. The results indicated that ‘HongYunDieYing’ had a faster light signal response than that in ‘YingYing’. Furthermore, 214 proteins in ‘HongYunDieYing’ and 171 proteins in ‘YingYing’ were differentially expressed at both the transcriptional and protein levels. These correlated members were mainly involved in photosynthesis, metabolism, secondary metabolites, ribosome, and protein biosynthesis. However, glycolysis/gluconeogenesis, carbon metabolism, fatty acid metabolism, glutathione metabolism, and hormone signaling, were unique to ‘HongYunDieYing’. The molecular model of light signal regulation of shade tolerance was constructed: the upstream light signal transduction related gene (cryptochrome 1, phytohormone B, phytochrome-interacting factor 3/5, ELONGATED HYPOCOTYL 5, and SUPPRESSOR OF PHYA-1) played a decisive role in regulating shade tolerance traits. Some transcription factors (MYBs, bHLHs and WRKYs) and hormone signaling (auxin, gibberellin and ethylene) were involved in mediating light signaling to regulate downstream biological events. These regulators and biological processes synergistically regulated the shade tolerance of lotus. Lotus requires sufficient sunlight for growth and development, and shaded environments will severely retard lotus growth and blossoming. At present, there are few reports on the systematic identification and characterization of light signal response-related regulators in lotus. This study focuses on the comparative analysis two bowl lotus cultivars with the different shade tolerance traits at transcriptome and proteome levels to uncover the novel insight of the light signal-related biological network and potential candidates involved in the mechanism. The results provide a theoretical basis for the bowl lotus breeding and the expansion of its applications.
    Keywords Lotus ; Nelumbo nucifera ; auxins ; carbon metabolism ; cryptochromes ; cultivars ; ethylene ; fatty acid metabolism ; genes ; gibberellins ; gluconeogenesis ; glutathione ; glycolysis ; growth and development ; hypocotyls ; molecular models ; photosynthesis ; protein synthesis ; proteome ; proteomics ; ribosomes ; secondary metabolites ; shade tolerance ; signal transduction ; solar radiation ; transcription (genetics) ; transcriptome ; transcriptomics ; Light signals ; Phytohormones ; HY5 ; PIF ; Bowl lotus
    Language English
    Dates of publication 2022-04
    Publishing place Elsevier B.V.
    Document type Article ; Online
    ZDB-ID 2400835-7
    ISSN 1876-7737 ; 1874-3919
    ISSN (online) 1876-7737
    ISSN 1874-3919
    DOI 10.1016/j.jprot.2021.104455
    Database NAL-Catalogue (AGRICOLA)

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  6. Article ; Online: Y

    Yang, Zhou / Sheng, Jiangyuan / Lv, Ke / Ren, Li / Zhang, Di

    Plant science : an international journal of experimental plant biology

    2019  Volume 284, Page(s) 143–160

    Abstract: Two dehydrins from Agapanthus praecox ( ... ...

    Abstract Two dehydrins from Agapanthus praecox (ApY
    MeSH term(s) Amaryllidaceae/genetics ; Amaryllidaceae/metabolism ; Amaryllidaceae/physiology ; Escherichia coli ; Gene Expression Regulation, Plant ; Hydroxyl Radical/metabolism ; Organisms, Genetically Modified ; Phylogeny ; Plant Proteins/genetics ; Plant Proteins/physiology ; Plants, Genetically Modified ; Sequence Analysis, DNA ; Stress, Physiological/physiology
    Chemical Substances Plant Proteins ; dehydrin proteins, plant (134711-03-8) ; Hydroxyl Radical (3352-57-6)
    Language English
    Publishing date 2019-03-20
    Publishing country Ireland
    Document type Journal Article
    ZDB-ID 742010-9
    ISSN 1873-2259 ; 0168-9452
    ISSN (online) 1873-2259
    ISSN 0168-9452
    DOI 10.1016/j.plantsci.2019.03.012
    Database MEDical Literature Analysis and Retrieval System OnLINE

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