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  1. Article ; Online: Molecular mechanisms of the juvenile form of Batten disease: important role of MAPK signaling pathways (ERK1/ERK2, JNK and p38) in pathogenesis of the malady.

    Shematorova, Elena K / Shpakovski, Dmitry G / Chernysheva, Anna D / Shpakovski, George V

    Biology direct

    2018  Volume 13, Issue 1, Page(s) 19

    Abstract: Background: Mutations in the CLN3 gene lead to so far an incurable juvenile-onset neuronal ceroid lipofuscinosis (JNCL) or Batten disease that starts at the age of 4-6 years with a progressive retinopathy leading to blindness. Motor disturbances, ... ...

    Abstract Background: Mutations in the CLN3 gene lead to so far an incurable juvenile-onset neuronal ceroid lipofuscinosis (JNCL) or Batten disease that starts at the age of 4-6 years with a progressive retinopathy leading to blindness. Motor disturbances, epilepsy and dementia manifest during several following years. Most JNCL patients carry the same 1.02-kb deletion in the CLN3 gene, encoding an unusual transmembrane protein, CLN3 or battenin.
    Results: Based on data of genome-wide expression profiling in CLN3 patients with different rate of the disease progression [Mol. Med., 2011, 17: 1253-1261] and our bioinformatic analysis of battenin protein-protein interactions in neurons we propose that CLN3 can function as a molecular chaperone for some plasma membrane proteins, being crucially important for their correct folding in endoplasmic reticulum. Changes in spatial structure of these membrane proteins lead to transactivation of the located nearby receptors. Particularly, CLN3 interacts with a subunit of Na/K ATPase ATP1A1 which changes its conformation and activates the adjacent epidermal growth factor receptor (EGFR). As a result, a large amount of erroneously activated EGFR generates MAPK signal cascades (ERK1/ERK2, JNKs and p38) from cell surface eventually causing neurons' death.
    Conclusions: Molecular mechanism of the juvenile form of Batten disease (JNCL), which is based on the excessive activation of signaling cascades in a time of the radical increase of neuronal membranes' area in the growing brain, have been proposed and substantiated. The primary cause of this phenomenon is the defective function of the CLN3 protein that could not act properly as molecular chaperone for some plasma membrane proteins in the endoplasmic reticulum. The incorrect three-dimensional structure of at least one such protein, ATP1A1, leads to unregulated spontaneous and repetitive activation of the SRC kinase that transactivates EGFR with the subsequent uncontrolled launch of various MAPK cascades. Possible ways of treatment of patients with JNCL have been suggested.
    Reviewers: This article was reviewed by Konstantinos Lefkimmiatis, Eugene Koonin and Vladimir Poroikov.
    MeSH term(s) Computational Biology ; Disease Progression ; Genome-Wide Association Study ; Humans ; Membrane Glycoproteins/genetics ; Membrane Glycoproteins/metabolism ; Mitogen-Activated Protein Kinase 1/genetics ; Mitogen-Activated Protein Kinase 1/metabolism ; Molecular Chaperones/genetics ; Molecular Chaperones/metabolism ; Neuronal Ceroid-Lipofuscinoses/genetics ; Signal Transduction/genetics
    Chemical Substances CLN3 protein, human ; Membrane Glycoproteins ; Molecular Chaperones ; MAPK1 protein, human (EC 2.7.11.24) ; Mitogen-Activated Protein Kinase 1 (EC 2.7.11.24)
    Language English
    Publishing date 2018-09-25
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 1745-6150
    ISSN (online) 1745-6150
    DOI 10.1186/s13062-018-0212-y
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Novel Interactions of Adrenodoxin-Related [2Fe-2S] Plant Ferredoxins MFDX1 and MFDX2 Indicate Their Involvement in a Wide Spectrum of Functions in Plant Mitochondria

    Shematorova Elena K. / Slovokhotov Ivan Yu. / Shmakov Vladimir N. / Khaliluev Marat R. / Shpakovski Dmitry G. / Klykov Valery N. / Babak Olga G. / Spivak Svetlana G. / Konstantinov Yuri M. / Shpakovski George V.

    Proceedings of the Latvian Academy of Sciences. Section B, Natural Sciences, Vol 73, Iss 6, Pp 478-

    2019  Volume 486

    Abstract: Electron transfer chains of plant organelles (both chloroplasts and mitochondria) contain their own special set of ferredoxins. The relatively recently described adrenodoxin-like [2Fe-2S]-ferredoxins MFDX1 and MFDX2 of plant mitochondria are among the ... ...

    Abstract Electron transfer chains of plant organelles (both chloroplasts and mitochondria) contain their own special set of ferredoxins. The relatively recently described adrenodoxin-like [2Fe-2S]-ferredoxins MFDX1 and MFDX2 of plant mitochondria are among the least studied of these. Until now, the only established function for them is participation in the final stage of biotin biosynthesis. In this work, using genetic and biochemical approaches, we searched for possible partners of these proteins in the genomes and proteomes of tobacco (Nicotiana tabacum L.) and foxglove (Digitalis purpurea L.) plants. MORF9 protein, one of the auxiliary components of the RNA editing complex of organelles (editosome), was found among the most prominent protein partners of adrenodoxin-like [2Fe-2S] tobacco ferredoxins. According to the results obtained from the yeast two-hybrid system, NtMFDX1 and NtMFDX2 of tobacco also bind and interact productively with the previously uncharacterised long non-coding polyadenylated RNA, which, based on its structural features, is capable of regulating the function of a number of components of complexes I (Nad1, Nad5) and III (protein of the cytochrome c synthesis system CcmF) and contributes to the formation of Fe/S-clusters in the corresponding protein complexes of the respiratory chain of plant mitochondria. We found one of the main components of the thiazol synthase complex (mitochondrial protein DpTHI1) to be the partner of ferredoxin DpMFDX2 of Digitalis purpurea. Finally, additional arguments were obtained in favour of the possible participation of MFDX1 and MFDX2 in the very ancient, but only recently described ‘progesterone’ steroid hormonal regulatory system: in leaves of the previously constructed CYP11A1-transgenic tomato plants, only the mature form of mitochondrial cytochrome P450scc (CYP11A1) of mammals is able to enter the mitochondria, where the above-mentioned components of the electron transport chain are localised. In summary, all of the newly revealed interactions of adrenodoxin-like [2Fe-2S] ferredoxins MFDX1 and MFDX2 indicate their participation in a wide range of functions in plant mitochondria.
    Keywords cyp11a1 ; cytochrome p450scc ; mitochondrial ferredoxins mfdx1 and mfdx2 ; transgenic plants ; Science ; Q
    Subject code 580
    Language English
    Publishing date 2019-12-01T00:00:00Z
    Publisher Sciendo
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article ; Online: Targeted Protection of Mitochondria of Mesophyll Cells in Transgenic CYP11A1 CDNA Expressing Tobacco Plant Leaves After NaCl-Induced Stress Damage

    Baranova Ekaterina N. / Khaliluev Marat R. / Spivak Svetlana G. / Bogoutdinova Lilia R. / Klykov Valery N. / Babak Olga G. / Shpakovski Dmitry G. / Kilchevsky Alexander V. / Shematorova Elena K. / Shpakovski George V.

    Proceedings of the Latvian Academy of Sciences. Section B, Natural Sciences, Vol 72, Iss 6, Pp 334-

    2018  Volume 340

    Abstract: Recently we have showed that the expression of the mammalian CYP11A1 cDNA in plants confers their resistance to abiotic and biotic stresses. To determine the role of heterologous expression of cytochrome P450scc cDNA in resistance to ROS (radical oxygen ... ...

    Abstract Recently we have showed that the expression of the mammalian CYP11A1 cDNA in plants confers their resistance to abiotic and biotic stresses. To determine the role of heterologous expression of cytochrome P450scc cDNA in resistance to ROS (radical oxygen species) dependent abiotic stresses, the structural changes of mitochondria and peroxisomes were studied under 150 mM NaCl-induced 14-day salinity treatment on juvenile tobacco plants in in vitro culture. Ultrastructural analysis of mesophyll cells of transgenic tobacco leaves constitutively expressing CYP11A1 cDNA was performed. Under NaCl stress, a change in shape from rounded to elon-gated, reduced section area, formation of branched mitochondria, as well as the emergence of triangular and rhomboid cristae, densification of a mitochondrial matrix, increase in density of contrasting membranes and their thickness were observed in non-transgenic plants. Transgenic plants without stress applied had mitochondria with rounded and elongated shape, twice as small as in non-transgenic plants, with a dense matrix and sinuous cristae. Surprisingly, the effect of NaCl led to increase in size of mitochondria by 1.5 times, decomposition of matrix and the emergence in organelles of light zones presumably containing mitochondrial DNA strands. Thus, the structural organisation of transgenic plant mitochondria under salinity treatment was comparable to that of non-transgenic plants under native conditions. It was also noted that the transgenic plant peroxisomes differed in non-transgenic tobacco both in normal condition and under the action of NaCl. The observed differences in ultrastructural organisation of mitochondria not only support our earlier notion about successful incorporation of the mature P450scc into this organelle, but for the first time demonstrate that the mammalian CYP11A1 signal peptide sequence could be efficiently used in the formation of targeted mitochondria protection of plants from salinity-induced damage.
    Keywords cyp11a1 ; cytochrome p450scc ; salinity ; mitochondrion ultrastructure ; transgenic plants ; Science ; Q
    Subject code 580 ; 630
    Language English
    Publishing date 2018-12-01T00:00:00Z
    Publisher Sciendo
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  4. Article: Novel Interactions of Adrenodoxin-Related [2Fe-2S] Plant Ferredoxins MFDX1 and MFDX2 Indicate Their Involvement in a Wide Spectrum of Functions in Plant Mitochondria

    Shematorova, Elena K / Slovokhotov, Ivan Yu / Shmakov, Vladimir N / Khaliluev, Marat R / Shpakovski, Dmitry G / Klykov, Valery N / Babak, Olga G / Spivak, Svetlana G / Konstantinov, Yuri M / Shpakovski, George V

    Proceedings of the Latvian Academy of Sciences. 2019 Dec. 01, v. 73, no. 6

    2019  

    Abstract: Electron transfer chains of plant organelles (both chloroplasts and mitochondria) contain their own special set of ferredoxins. The relatively recently described adrenodoxin-like [2Fe-2S]-ferredoxins MFDX1 and MFDX2 of plant mitochondria are among the ... ...

    Abstract Electron transfer chains of plant organelles (both chloroplasts and mitochondria) contain their own special set of ferredoxins. The relatively recently described adrenodoxin-like [2Fe-2S]-ferredoxins MFDX1 and MFDX2 of plant mitochondria are among the least studied of these. Until now, the only established function for them is participation in the final stage of biotin biosynthesis. In this work, using genetic and biochemical approaches, we searched for possible partners of these proteins in the genomes and proteomes of tobacco (Nicotiana tabacum L.) and foxglove (Digitalis purpurea L.) plants. MORF9 protein, one of the auxiliary components of the RNA editing complex of organelles (editosome), was found among the most prominent protein partners of adrenodoxin-like [2Fe-2S] tobacco ferredoxins. According to the results obtained from the yeast two-hybrid system, NtMFDX1 and NtMFDX2 of tobacco also bind and interact productively with the previously uncharacterised long non-coding polyadenylated RNA, which, based on its structural features, is capable of regulating the function of a number of components of complexes I (Nad1, Nad5) and III (protein of the cytochrome c synthesis system CcmF) and contributes to the formation of Fe/S-clusters in the corresponding protein complexes of the respiratory chain of plant mitochondria. We found one of the main components of the thiazol synthase complex (mitochondrial protein DpTHI1) to be the partner of ferredoxin DpMFDX2 of Digitalis purpurea. Finally, additional arguments were obtained in favour of the possible participation of MFDX1 and MFDX2 in the very ancient, but only recently described ‘progesterone’ steroid hormonal regulatory system: in leaves of the previously constructed CYP11A1-transgenic tomato plants, only the mature form of mitochondrial cytochrome P450scc (CYP11A1) of mammals is able to enter the mitochondria, where the above-mentioned components of the electron transport chain are localised. In summary, all of the newly revealed interactions of adrenodoxin-like [2Fe-2S] ferredoxins MFDX1 and MFDX2 indicate their participation in a wide range of functions in plant mitochondria.
    Keywords Digitalis purpurea ; Nicotiana tabacum ; biosynthesis ; biotin ; chloroplasts ; electron transfer ; electron transport chain ; ferredoxins ; genome ; messenger RNA ; mitochondria ; mitochondrial proteins ; proteome ; tobacco ; tomatoes ; two hybrid system techniques
    Language English
    Dates of publication 2019-1201
    Size p. 478-486.
    Publishing place Sciendo
    Document type Article
    Note NAL-AP-2-clean
    ISSN 2255-890X
    DOI 10.2478/prolas-2019-0074
    Database NAL-Catalogue (AGRICOLA)

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  5. Article: A key enzyme of animal steroidogenesis can function in plants enhancing their immunity and accelerating the processes of growth and development

    Shpakovski, George V / Spivak, Svetlana G / Berdichevets, Irina N / Babak, Olga G / Kubrak, Svetlana V / Kilchevsky, Alexander V / Aralov, Andrey V / Slovokhotov, Ivan Yu / Shpakovski, Dmitry G / Baranova, Ekaterina N / Khaliluev, Marat R / Shematorova, Elena K

    BMC plant biology. 2017 Nov., v. 17, no. Supplement 1

    2017  

    Abstract: BACKGROUND: The initial stage of the biosynthesis of steroid hormones in animals occurs in the mitochondria of steroidogenic tissues, where cytochrome P450SCC (CYP11A1) encoded by the CYP11A1 gene catalyzes the conversion of cholesterol into pregnenolone ...

    Abstract BACKGROUND: The initial stage of the biosynthesis of steroid hormones in animals occurs in the mitochondria of steroidogenic tissues, where cytochrome P450SCC (CYP11A1) encoded by the CYP11A1 gene catalyzes the conversion of cholesterol into pregnenolone – the general precursor of all the steroid hormones, starting with progesterone. This stage is missing in plants where mitochondrial cytochromes P450 (the mito CYP clan) have not been found. Generating transgenic plants with a mitochondrial type P450 from animals would offer an interesting option to verify whether plant mitochondria could serve as another site of P450 monooxygenase reaction for the steroid hormones biosynthesis. RESULTS: For a more detailed comparison of steroidogenic systems of Plantae and Animalia, we have created and studied transgenic tobacco and tomato plants efficiently expressing mammalian CYP11A1 cDNA. The detailed phenotypic characterization of plants obtained has shown that through four generations studied, the transgenic tobacco plants have reduced a period of vegetative development (early flowering and maturation of bolls), enlarged biomass and increased productivity (quantity and quality of seeds) as compared to the only empty-vector containing or wild type plants. Moreover, the CYP11A1 transgenic plants show resistance to such fungal pathogen as Botrytis cinerea. Similar valuable phenotypes (the accelerated course of ontogenesis and/or stress resistance) are also visible in two clearly distinct transgenic tomato lines expressing CYP11A1 cDNA: one line (No. 4) has an accelerated rate of vegetative development, while the other (No. 7) has enhanced immunity to abiotic and biotic stresses. The progesterone level in transgenic tobacco and tomato leaves is 3–5 times higher than in the control plants of the wild type. CONCLUSIONS: For the first time, we could show the compatibility in vivo of even the most specific components of the systems of biosynthesis of steroid hormones in Plantae and Animalia. The hypothesis is proposed and substantiated that the formation of the above-noted special phenotypes of transgenic plants expressing mammalian CYP11A1 cDNA is due to the increased biosynthesis of progesterone that can be considered as a very ancient bioregulator of plant cells and the first real hormone common to plants and animals.
    Keywords Animalia ; Botrytis cinerea ; Plantae ; biomass ; biosynthesis ; biotic stress ; bolls ; cholesterol ; complementary DNA ; cytochrome P-450 ; fungi ; genes ; growth and development ; immunity ; leaves ; mammals ; mitochondria ; ontogeny ; pathogens ; phenotype ; pregnenolone ; progesterone ; seeds ; steroid hormones ; steroidogenesis ; stress tolerance ; tissues ; tobacco ; tomatoes ; transgenic plants
    Language English
    Dates of publication 2017-11
    Size p. 189.
    Publishing place BioMed Central
    Document type Article
    ISSN 1471-2229
    DOI 10.1186/s12870-017-1123-2
    Database NAL-Catalogue (AGRICOLA)

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  6. Article ; Online: A key enzyme of animal steroidogenesis can function in plants enhancing their immunity and accelerating the processes of growth and development.

    Shpakovski, George V / Spivak, Svetlana G / Berdichevets, Irina N / Babak, Olga G / Kubrak, Svetlana V / Kilchevsky, Alexander V / Aralov, Andrey V / Slovokhotov, Ivan Yu / Shpakovski, Dmitry G / Baranova, Ekaterina N / Khaliluev, Marat R / Shematorova, Elena K

    BMC plant biology

    2017  Volume 17, Issue Suppl 1, Page(s) 189

    Abstract: Background: The initial stage of the biosynthesis of steroid hormones in animals occurs in the mitochondria of steroidogenic tissues, where cytochrome P450: Results: For a more detailed comparison of steroidogenic systems of Plantae and Animalia, we ... ...

    Abstract Background: The initial stage of the biosynthesis of steroid hormones in animals occurs in the mitochondria of steroidogenic tissues, where cytochrome P450
    Results: For a more detailed comparison of steroidogenic systems of Plantae and Animalia, we have created and studied transgenic tobacco and tomato plants efficiently expressing mammalian CYP11A1 cDNA. The detailed phenotypic characterization of plants obtained has shown that through four generations studied, the transgenic tobacco plants have reduced a period of vegetative development (early flowering and maturation of bolls), enlarged biomass and increased productivity (quantity and quality of seeds) as compared to the only empty-vector containing or wild type plants. Moreover, the CYP11A1 transgenic plants show resistance to such fungal pathogen as Botrytis cinerea. Similar valuable phenotypes (the accelerated course of ontogenesis and/or stress resistance) are also visible in two clearly distinct transgenic tomato lines expressing CYP11A1 cDNA: one line (No. 4) has an accelerated rate of vegetative development, while the other (No. 7) has enhanced immunity to abiotic and biotic stresses. The progesterone level in transgenic tobacco and tomato leaves is 3-5 times higher than in the control plants of the wild type.
    Conclusions: For the first time, we could show the compatibility in vivo of even the most specific components of the systems of biosynthesis of steroid hormones in Plantae and Animalia. The hypothesis is proposed and substantiated that the formation of the above-noted special phenotypes of transgenic plants expressing mammalian CYP11A1 cDNA is due to the increased biosynthesis of progesterone that can be considered as a very ancient bioregulator of plant cells and the first real hormone common to plants and animals.
    MeSH term(s) Agrobacterium/genetics ; Animals ; Botrytis/physiology ; Cattle ; Cholesterol Side-Chain Cleavage Enzyme/genetics ; Cholesterol Side-Chain Cleavage Enzyme/metabolism ; Cloning, Molecular ; Solanum lycopersicum/genetics ; Solanum lycopersicum/immunology ; Solanum lycopersicum/microbiology ; Plants, Genetically Modified ; Progesterone/metabolism ; Steroids/biosynthesis ; Nicotiana/genetics ; Nicotiana/immunology ; Nicotiana/microbiology
    Chemical Substances Steroids ; Progesterone (4G7DS2Q64Y) ; Cholesterol Side-Chain Cleavage Enzyme (EC 1.14.15.6)
    Language English
    Publishing date 2017-11-14
    Publishing country England
    Document type Journal Article
    ZDB-ID 2059868-3
    ISSN 1471-2229 ; 1471-2229
    ISSN (online) 1471-2229
    ISSN 1471-2229
    DOI 10.1186/s12870-017-1123-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Mitochondria as a Possible Place for Initial Stages of Steroid Biosynthesis in Plants

    Shematorova Elena K. / Slovokhotov Ivan Yu. / Khaliluev Marat R. / Berdichevets Irina N. / Baranova Ekaterina N. / Babak Olga G. / Shpakovski Dmitry G. / Spivak Svetlana G. / Shpakovski George V.

    Journal of Stress Physiology & Biochemistry

    Abstract: With the aim of thorough comparison of steroidogenic systems of plants and animals, transgenic plants of Solanaceae family expressing CYP11A1 cDNA encoding cytochrome P450SCC of mammalian mitochondria were further analysed. Positive effect of CYP11A1 on ... ...

    Abstract With the aim of thorough comparison of steroidogenic systems of plants and animals, transgenic plants of Solanaceae family expressing CYP11A1 cDNA encoding cytochrome P450SCC of mammalian mitochondria were further analysed. Positive effect of CYP11A1 on resistance of the transgenic tobacco plants to the infection by fungal phytopathogene Botrytis cinerea was for the first time detected. Subtle changes in mitochondria of the transgenic Nicotiana tabacum plants expressing mammalian CYP11A1 cDNA were demonstrated by transmissive electron microscopy. The main components of the electron transfer chain of plant mitochondria were for the first time cloned and characterized. It was established that plants from the Solanacea family (tomato, tobacco and potato) contain two different genes with similar exon-intron structures (all contain 8 exons) encoding mitochondrial type ferredoxins (MFDX), and one gene for mitochondrial ferredoxin reductase (MFDXR). The results obtained point out on profound relatedness of electron transfer chains of P450-dependent monooxygenases in mammalian and plant mitochondria and support our previous findings about functional compatability of steroidogenic systems of Plantae and Animalia.
    Keywords Botrytis cinerea ; progesterone ; electron microscopy ; Transgenic plants
    Language Russian
    Document type Article
    ISSN 1997-0838
    Database AGRIS - International Information System for the Agricultural Sciences and Technology

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