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  1. Article ; Online: Algorithm-based selection of automated red blood cell exchange procedure goals reduces blood utilization in chronically transfused adults with sickle cell disease.

    Buban, Kristen R / Lawrence, Courtney E / Zhu, Xianming Joshua / Tobian, Aaron A R / Gehrie, Eric Abraham / Vozniak, Sonja / Shrestha, Ruchee / Lokhandwala, Parvez M / Bloch, Evan M

    Journal of clinical apheresis

    2022  Volume 37, Issue 5, Page(s) 468–475

    Abstract: Background: Automated red cell exchange (RCE) is a common treatment for patients with sickle cell disease (SCD). Two key parameters are used to determine the volume of blood for RCE to reduce sickle hemoglobin (eg, HbS): fraction of cells remaining (FCR) ...

    Abstract Background: Automated red cell exchange (RCE) is a common treatment for patients with sickle cell disease (SCD). Two key parameters are used to determine the volume of blood for RCE to reduce sickle hemoglobin (eg, HbS): fraction of cells remaining (FCR) and target hematocrit. We evaluated how the calculated FCR-using the manufacturer's algorithm-impacted blood utilization and incidence of acute care encounters.
    Study design and methods: Retrospective chart review was conducted of 15 adults with SCD who underwent chronic RCE from July 1, 2015 to August 31, 2019. Blood utilization and acute care encounters were compared across three time periods: (a) when a fixed FCR of 30% was used (12 months); (b) transition period during which physicians made ad hoc changes to the FCR (25 months); (c) algorithm phase when a procedural FCR between 30% and 50% was selected using an algorithm generated by the manufacturer's built-in software to target a HbS fraction of 8% post-procedure (12 months). Wilcoxon signed rank test was used to determine statistical significance.
    Results: Median blood utilization per procedure decreased from 2398 mL (interquartile range [IQR]: 2271-2759 mL) during the fixed FCR phase to 1887 mL (IQR: 1495-2241 mL) during the algorithm phase (P < 0.001). Similarly, median number of units transfused decreased from 10 (9-11) to 7 (5-9) during the respective phases (P < 0.001). Visits to the emergency department were 1 (0-4) in the fixed FCR phase and 0 (0-3) in the algorithm phase.
    Conclusion: Algorithm-based selection of a procedural FCR significantly reduced blood utilization (~21%) without appearing to increase acute care encounters.
    MeSH term(s) Adult ; Algorithms ; Anemia, Sickle Cell/therapy ; Erythrocyte Transfusion/methods ; Erythrocytes ; Goals ; Hemoglobin, Sickle/analysis ; Humans ; Retrospective Studies
    Chemical Substances Hemoglobin, Sickle
    Language English
    Publishing date 2022-08-22
    Publishing country United States
    Document type Journal Article
    ZDB-ID 604912-6
    ISSN 1098-1101 ; 0733-2459
    ISSN (online) 1098-1101
    ISSN 0733-2459
    DOI 10.1002/jca.22004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Differential antibody production by symptomatology in SARS-CoV-2 convalescent individuals.

    Saraf, Sharada / Zhu, Xianming / Shrestha, Ruchee / Bonny, Tania S / Baker, Owen R / Beck, Evan J / Fernandez, Reinaldo E / Eby, Yolanda / Akinde, Olivia / Ruff, Jessica E / Caturegli, Patrizio / Redd, Andrew D / Bloch, Evan M / Quinn, Thomas C / Tobian, Aaron Ar / Laeyendecker, Oliver

    medRxiv : the preprint server for health sciences

    2022  

    Abstract: The association between COVID-19 symptoms and antibody responses against SARS-CoV-2 is poorly characterized. We analyzed antibody levels in individuals with known SARS-CoV-2 infection to identify potential antibody-symptom associations. Convalescent ... ...

    Abstract The association between COVID-19 symptoms and antibody responses against SARS-CoV-2 is poorly characterized. We analyzed antibody levels in individuals with known SARS-CoV-2 infection to identify potential antibody-symptom associations. Convalescent plasma from 216 SARS-CoV-2 RNA+ individuals with symptomatology information were tested for the presence of IgG to the spike S1 subunit (Euroimmun ELISA), IgG to receptor binding domain (RBD, CoronaCHEK rapid test), and for IgG, IgA, and IgM to nucleocapsid (N, Bio-Rad ELISA). Logistic regression was used to estimate the odds of having a COVID-19 symptom from the antibody response, adjusting for sex and age. Cough strongly associated with antibodies against S1 (adjusted odds ratio [aOR]= 5.33; 95% CI from 1.51 to 18.86) and RBD (aOR=4.36; CI 1.49, 12.78). In contrast, sore throat significantly associated with the absence of antibodies to S1 and N (aOR=0.25; CI 0.08, 0.80 and aOR=0.31; 0.11, 0.91). Similarly, lack of symptoms associated with the absence of antibodies to N and RBD (aOR=0.16; CI 0.03, 0.97 and aOR=0.16; CI 0.03, 1.01). Cough appeared to be correlated with a seropositive result, suggesting that SARS-CoV-2 infected individuals exhibiting lower respiratory symptoms generate a robust antibody response. Conversely, those without symptoms or limited to a sore throat while infected with SARS-CoV-2 were likely to lack a detectable antibody response. These findings strongly support the notion that severity of infection correlates with robust antibody response.
    Language English
    Publishing date 2022-02-09
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2022.02.09.22270718
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Differential antibody production by symptomatology in SARS-CoV-2 convalescent individuals.

    Saraf, Sharada / Zhu, Xianming / Shrestha, Ruchee / Bonny, Tania S / Baker, Owen R / Beck, Evan J / Fernandez, Reinaldo E / Eby, Yolanda / Akinde, Olivia / Ruff, Jessica E / Caturegli, Patrizio / Redd, Andrew D / Bloch, Evan M / Quinn, Thomas C / Tobian, Aaron A R / Laeyendecker, Oliver

    PloS one

    2022  Volume 17, Issue 6, Page(s) e0264298

    Abstract: The association between COVID-19 symptoms and antibody responses against SARS-CoV-2 is poorly characterized. We analyzed antibody levels in individuals with known SARS-CoV-2 infection to identify potential antibody-symptom associations. Convalescent ... ...

    Abstract The association between COVID-19 symptoms and antibody responses against SARS-CoV-2 is poorly characterized. We analyzed antibody levels in individuals with known SARS-CoV-2 infection to identify potential antibody-symptom associations. Convalescent plasma from 216 SARS-CoV-2 RNA+ individuals with symptomatology information were tested for the presence of IgG to the spike S1 subunit (Euroimmun ELISA), IgG to receptor binding domain (RBD, CoronaCHEK rapid test), and for IgG, IgA, and IgM to nucleocapsid (N, Bio-Rad ELISA). Logistic regression was used to estimate the odds of having a COVID-19 symptom from the antibody response, adjusting for sex and age. Cough strongly associated with antibodies against S1 (adjusted odds ratio [aOR] = 5.33; 95% CI from 1.51 to 18.86) and RBD (aOR = 4.36; CI 1.49, 12.78). In contrast, sore throat significantly associated with the absence of antibodies to S1 and N (aOR = 0.25; CI 0.08, 0.80 and aOR = 0.31; 0.11, 0.91). Similarly, lack of symptoms associated with the absence of antibodies to N and RBD (aOR = 0.16; CI 0.03, 0.97 and aOR = 0.16; CI 0.03, 1.01). Cough appeared to be correlated with a seropositive result, suggesting that SARS-CoV-2 infected individuals exhibiting lower respiratory symptoms generate a robust antibody response. Conversely, those without symptoms or limited to a sore throat while infected with SARS-CoV-2 were likely to lack a detectable antibody response. These findings strongly support the notion that severity of infection correlates with robust antibody response.
    MeSH term(s) Antibodies, Viral ; Antibody Formation ; COVID-19/therapy ; Cough ; Humans ; Immunization, Passive ; Immunoglobulin G ; Pharyngitis ; RNA, Viral ; SARS-CoV-2 ; Spike Glycoprotein, Coronavirus ; COVID-19 Serotherapy
    Chemical Substances Antibodies, Viral ; Immunoglobulin G ; RNA, Viral ; Spike Glycoprotein, Coronavirus ; spike protein, SARS-CoV-2
    Language English
    Publishing date 2022-06-09
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, N.I.H., Intramural
    ZDB-ID 2267670-3
    ISSN 1932-6203 ; 1932-6203
    ISSN (online) 1932-6203
    ISSN 1932-6203
    DOI 10.1371/journal.pone.0264298
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Absence of pathogenic viruses in COVID-19 convalescent plasma.

    Kandathil, Abraham J / Benner, Sarah E / Bloch, Evan M / Shrestha, Ruchee / Ajayi, Olivia / Zhu, Xianming / Caturegli, Patrizio P / Shoham, Shmuel / Sullivan, David / Gebo, Kelly / Quinn, Thomas C / Casadevall, Arturo / Hanley, Daniel / Pekosz, Andrew / Redd, Andrew D / Balagopal, Ashwin / Tobian, Aaron A R

    Transfusion

    2022  Volume 63, Issue 1, Page(s) 23–29

    Abstract: Background: It is important to maintain the safety of blood products by avoiding the transfusion of units with known and novel viral pathogens. It is unknown whether COVID-19 convalescent plasma (CCP) may contain pathogenic viruses (either newly ... ...

    Abstract Background: It is important to maintain the safety of blood products by avoiding the transfusion of units with known and novel viral pathogens. It is unknown whether COVID-19 convalescent plasma (CCP) may contain pathogenic viruses (either newly acquired or reactivated) that are not routinely screened for by blood centers.
    Methods: The DNA virome was characterized in potential CCP donors (n = 30) using viral genome specific PCR primers to identify DNA plasma virome members of the Herpesviridae [Epstein Barr Virus (EBV), cytomegalovirus (CMV), human herpesvirus 6A/B, human herpesvirus 7] and Anelloviridae [Torque teno viruses (TTV), Torque teno mini viruses (TTMV), and Torque teno midi viruses (TTMDV)] families. In addition, the RNA plasma virome was characterized using unbiased metagenomic sequencing. Sequencing was done on a HiSeq2500 using high output mode with a read length of 2X100 bp. The sequencing reads were taxonomically classified using Kraken2. CMV and EBV seroprevalence were evaluated using a chemiluminescent immunoassay.
    Results: TTV and TTMDV were detected in 12 (40%) and 4 (13%) of the 30 study participants, respectively; TTMDV was always associated with infection with TTV. We did not observe TTMV DNAemia. Despite CMV and EBV seroprevalences of 33.3% and 93.3%, respectively, we did not detect Herpesviridae DNA among the study participants. Metagenomic sequencing did not reveal any human RNA viruses in CCP, including no evidence of circulating SARS-CoV-2.
    Discussion: There was no evidence of pathogenic viruses, whether newly acquired or reactivated, in CCP despite the presence of non-pathogenic Anelloviridae. These results confirm the growing safety data supporting CCP.
    MeSH term(s) Humans ; Epstein-Barr Virus Infections ; Seroepidemiologic Studies ; Herpesvirus 4, Human/genetics ; COVID-19/therapy ; COVID-19 Serotherapy ; SARS-CoV-2/genetics ; Anelloviridae/genetics ; Torque teno virus/genetics ; Cytomegalovirus/genetics ; Cytomegalovirus Infections ; DNA ; DNA, Viral/genetics ; DNA Virus Infections
    Chemical Substances DNA (9007-49-2) ; DNA, Viral
    Language English
    Publishing date 2022-11-03
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, N.I.H., Intramural ; Research Support, N.I.H., Extramural ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 208417-x
    ISSN 1537-2995 ; 0041-1132
    ISSN (online) 1537-2995
    ISSN 0041-1132
    DOI 10.1111/trf.17168
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  5. Article: A hemagglutination-based, semi-quantitative test for point-of-care determination of SARS-CoV-2 antibody levels.

    Kruse, Robert L / Huang, Yuting / Lee, Alyssa / Zhu, Xianming / Shrestha, Ruchee / Laeyendecker, Oliver / Littlefield, Kirsten / Pekosz, Andy / Bloch, Evan M / Tobian, Aaron A R / Wang, Zack Z

    medRxiv : the preprint server for health sciences

    2021  

    Abstract: Serologic, point-of-care tests to detect antibodies against SARS-CoV-2 are an important tool in the COVID-19 pandemic. The majority of current point-of-care antibody tests developed for SARS-CoV-2 rely on lateral flow assays, but these do not offer ... ...

    Abstract Serologic, point-of-care tests to detect antibodies against SARS-CoV-2 are an important tool in the COVID-19 pandemic. The majority of current point-of-care antibody tests developed for SARS-CoV-2 rely on lateral flow assays, but these do not offer quantitative information. To address this, we developed a new method of COVID-19 antibody testing employing hemagglutination tested on a dry card, similar to that which is already available for rapid typing of ABO blood groups. A fusion protein linking red blood cells (RBCs) to the receptor-binding domain (RBD) of SARS-CoV-2 spike protein was placed on the card. 200 COVID-19 patient and 200 control plasma samples were reconstituted with O-negative RBCs to form whole blood and added to the dried protein, followed by a stirring step and a tilting step, 3-minute incubation, and a second tilting step. The sensitivity for the hemagglutination test, Euroimmun IgG ELISA test and RBD-based CoronaChek lateral flow assay was 87.0%, 86.5%, and 84.5%, respectively, using samples obtained from recovered COVID-19 individuals. Testing pre-pandemic samples, the hemagglutination test had a specificity of 95.5%, compared to 97.3% and 98.9% for the ELISA and CoronaChek, respectively. A distribution of agglutination strengths was observed in COVID-19 convalescent plasma samples, with the highest agglutination score (4) exhibiting significantly higher neutralizing antibody titers than weak positives (2) (p<0.0001). Strong agglutinations were observed within 1 minute of testing, and this shorter assay time also increased specificity to 98.5%. In conclusion, we developed a novel rapid, point-of-care RBC agglutination test for the detection of SARS-CoV-2 antibodies that can yield semi-quantitative information on neutralizing antibody titer in patients. The five-minute test may find use in determination of serostatus prior to vaccination, post-vaccination surveillance and travel screening.
    Language English
    Publishing date 2021-05-04
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2021.05.01.21256452
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: A Hemagglutination-Based Semiquantitative Test for Point-of-Care Determination of SARS-CoV-2 Antibody Levels.

    Kruse, Robert L / Huang, Yuting / Lee, Alyssa / Zhu, Xianming / Shrestha, Ruchee / Laeyendecker, Oliver / Littlefield, Kirsten / Pekosz, Andy / Bloch, Evan M / Tobian, Aaron A R / Wang, Zack Z

    Journal of clinical microbiology

    2021  Volume 59, Issue 12, Page(s) e0118621

    Abstract: Serologic point-of-care tests to detect antibodies against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are an important tool in the COVID-19 pandemic. The majority of current point-of-care antibody tests developed for SARS-CoV-2 rely on ... ...

    Abstract Serologic point-of-care tests to detect antibodies against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are an important tool in the COVID-19 pandemic. The majority of current point-of-care antibody tests developed for SARS-CoV-2 rely on lateral flow assays, but these do not offer quantitative information. To address this, we developed a novel antibody test leveraging hemagglutination, employing a dry card format currently used for typing ABO blood groups. Two hundred COVID-19 patient and 200 control plasma samples were reconstituted with O-negative red blood cells (RBCs) to form whole blood and added to dried viral-antibody fusion protein, followed by a stirring step and a tilting step, 3-min incubation, and a second tilting step. The sensitivities of the hemagglutination test, Euroimmun IgG enzyme-linked immunosorbent assay (ELISA), and receptor binding domain (RBD)-based CoronaChek lateral flow assay were 87.0%, 86.5%, and 84.5%, respectively, using samples obtained from recovered COVID-19 individuals. Testing prepandemic samples, the hemagglutination test had a specificity of 95.5%, compared to 97.3% and 98.9% for the ELISA and CoronaChek, respectively. A distribution of agglutination strengths was observed in COVID-19 convalescent-phase plasma samples, with the highest agglutination score (4) exhibiting significantly higher neutralizing antibody titers than weak positives (2) (
    MeSH term(s) Antibodies, Viral ; COVID-19 ; Enzyme-Linked Immunosorbent Assay ; Hemagglutination ; Hemagglutination Tests ; Humans ; Pandemics ; Point-of-Care Systems ; SARS-CoV-2 ; Sensitivity and Specificity
    Chemical Substances Antibodies, Viral
    Language English
    Publishing date 2021-09-01
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 390499-4
    ISSN 1098-660X ; 0095-1137
    ISSN (online) 1098-660X
    ISSN 0095-1137
    DOI 10.1128/JCM.01186-21
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Secondary bacterial culture of platelets to mitigate transfusion-associated sepsis: A 3-year analysis at a large academic institution.

    Fenwick, Alexander J / Gehrie, Eric A / Marshall, Christi E / Tobian, Aaron A R / Shrestha, Ruchee / Kacker, Seema / Brunker, Patricia A R / Shifflett, Lisa / Carroll, Karen C / Gozelanczyk, Donna / Goel, Ruchika / Ness, Paul M / Bloch, Evan M

    Transfusion

    2020  Volume 60, Issue 9, Page(s) 2021–2028

    Abstract: Background: In 2019, the United States Food and Drug Administration published its final recommendations to mitigate bacterial contamination of platelets. We sought to evaluate our secondary bacterial culture (SBC) strategy in light of those ... ...

    Abstract Background: In 2019, the United States Food and Drug Administration published its final recommendations to mitigate bacterial contamination of platelets. We sought to evaluate our secondary bacterial culture (SBC) strategy in light of those recommendations.
    Study design and methods: A retrospective analysis was conducted of SBC data (October 2016-2019) at our institution. SBC was performed upon receipt (Day 3 after collection); 5 mL of platelet product was inoculated aseptically into an aerobic bottle and incubated at 35°C for 3 days. For 8 months, a 10-mL inoculum was trialed. No quarantine was applied. All positive cultures underwent Gram staining and repeat culture of the platelet product (if available). A probable true positive was defined as concordant positive culture between the initial and repeat culture. The incidence of probable true- and false-positive cultures were reported descriptively and differences evaluated by sampling volume.
    Results: Over 3 years, 55 896 platelet products underwent SBC, yielding 30 initial positive results (approx. 1/1863 platelets); 25 (83.3%) signaled within 24 hours of SBC. The rates of probable true positive, false positive, and indeterminate for 5 mL were 0.027% (1/3771), 0.002% (1/45 251) and 0.018% (1/5656), respectively. The respective rates for 10 mL were 0.018% (1/5323), 0.07% (1/1521), and 0%. Seven of eight (87.5%) false-positive SBCs occurred with a 10-mL inoculum. No septic transfusion reactions were reported.
    Conclusion: SBC continues to interdict bacterially contaminated units of platelets. Our findings suggest higher rates of false positivity using large-volume inocula.
    MeSH term(s) Bacterial Infections/blood ; Bacterial Infections/etiology ; Bacterial Infections/microbiology ; Bacterial Infections/prevention & control ; Bacteriological Techniques ; Blood Culture ; Blood Platelets ; Humans ; Platelet Transfusion/adverse effects ; Retrospective Studies ; Sepsis/blood ; Sepsis/etiology ; Sepsis/microbiology ; Sepsis/prevention & control ; Transfusion Reaction/blood ; Transfusion Reaction/microbiology ; Transfusion Reaction/prevention & control ; United States
    Language English
    Publishing date 2020-08-04
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 208417-x
    ISSN 1537-2995 ; 0041-1132
    ISSN (online) 1537-2995
    ISSN 0041-1132
    DOI 10.1111/trf.15978
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: ABO blood group and SARS-CoV-2 antibody response in a convalescent donor population.

    Bloch, Evan M / Patel, Eshan U / Marshall, Christi / Littlefield, Kirsten / Goel, Ruchika / Grossman, Brenda J / Winters, Jeffrey L / Shrestha, Ruchee / Burgess, Imani / Laeyendecker, Oliver / Shoham, Shmuel / Sullivan, David / Gehrie, Eric A / Redd, Andrew D / Quinn, Thomas C / Casadevall, Arturo / Pekosz, Andrew / Tobian, Aaron A R

    Vox sanguinis

    2021  Volume 116, Issue 7, Page(s) 766–773

    Abstract: Background and objectives: ABO blood group may affect risk of SARS-CoV-2 infection and/or severity of COVID-19. We sought to determine whether IgG, IgA and neutralizing antibody (nAb) to SARS-CoV-2 vary by ABO blood group.: Materials and methods: ... ...

    Abstract Background and objectives: ABO blood group may affect risk of SARS-CoV-2 infection and/or severity of COVID-19. We sought to determine whether IgG, IgA and neutralizing antibody (nAb) to SARS-CoV-2 vary by ABO blood group.
    Materials and methods: Among eligible convalescent plasma donors, ABO blood group was determined via agglutination of reagent A1 and B cells, IgA and IgG were quantified using the Euroimmun anti-SARS-CoV-2 ELISA, and nAb titres were quantified using a microneutralization assay. Differences in titre distribution were examined by ABO blood group using non-parametric Kruskal-Wallis tests. Adjusted prevalence ratios (aPR) of high nAb titre (≥1:160) were estimated by blood group using multivariable modified Poisson regression models that adjusted for age, sex, hospitalization status and time since SARS-CoV-2 diagnosis.
    Results: Of the 202 potential donors, 65 (32%) were blood group A, 39 (19%) were group B, 13 (6%) were group AB, and 85 (42%) were group O. Distribution of nAb titres significantly differed by ABO blood group, whereas there were no significant differences in anti-spike IgA or anti-spike IgG titres by ABO blood group. There were significantly more individuals with high nAb titre (≥1:160) among those with blood group B, compared with group O (aPR = 1·9 [95%CI = 1·1-3·3], P = 0·029). Fewer individuals had a high nAb titre among those with blood group A, compared with group B (aPR = 0·6 [95%CI = 0·4-1·0], P = 0·053).
    Conclusion: Eligible CCP donors with blood group B may have relatively higher neutralizing antibody titres. Additional studies evaluating ABO blood groups and antibody titres that incorporate COVID-19 severity are needed.
    MeSH term(s) ABO Blood-Group System ; Antibodies, Viral ; Antibody Formation ; Blood Donors ; COVID-19/therapy ; COVID-19 Testing ; Humans ; Immunization, Passive ; SARS-CoV-2 ; COVID-19 Serotherapy
    Chemical Substances ABO Blood-Group System ; Antibodies, Viral
    Language English
    Publishing date 2021-01-25
    Publishing country England
    Document type Journal Article
    ZDB-ID 80313-3
    ISSN 1423-0410 ; 0042-9007
    ISSN (online) 1423-0410
    ISSN 0042-9007
    DOI 10.1111/vox.13070
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  9. Article ; Online: Antibody attributes that predict the neutralization and effector function of polyclonal responses to SARS-CoV-2.

    Natarajan, Harini / Xu, Shiwei / Crowley, Andrew R / Butler, Savannah E / Weiner, Joshua A / Bloch, Evan M / Littlefield, Kirsten / Benner, Sarah E / Shrestha, Ruchee / Ajayi, Olivia / Wieland-Alter, Wendy / Sullivan, David / Shoham, Shmuel / Quinn, Thomas C / Casadevall, Arturo / Pekosz, Andrew / Redd, Andrew D / Tobian, Aaron A R / Connor, Ruth I /
    Wright, Peter F / Ackerman, Margaret E

    BMC immunology

    2022  Volume 23, Issue 1, Page(s) 7

    Abstract: Background: While antibodies can provide significant protection from SARS-CoV-2 infection and disease sequelae, the specific attributes of the humoral response that contribute to immunity are incompletely defined.: Methods: We employ machine learning ...

    Abstract Background: While antibodies can provide significant protection from SARS-CoV-2 infection and disease sequelae, the specific attributes of the humoral response that contribute to immunity are incompletely defined.
    Methods: We employ machine learning to relate characteristics of the polyclonal antibody response raised by natural infection to diverse antibody effector functions and neutralization potency with the goal of generating both accurate predictions of each activity based on antibody response profiles as well as insights into antibody mechanisms of action.
    Results: To this end, antibody-mediated phagocytosis, cytotoxicity, complement deposition, and neutralization were accurately predicted from biophysical antibody profiles in both discovery and validation cohorts. These models identified SARS-CoV-2-specific IgM as a key predictor of neutralization activity whose mechanistic relevance was supported experimentally by depletion.
    Conclusions: Validated models of how different aspects of the humoral response relate to antiviral antibody activities suggest desirable attributes to recapitulate by vaccination or other antibody-based interventions.
    Language English
    Publishing date 2022-02-16
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Intramural
    ZDB-ID 2041500-X
    ISSN 1471-2172 ; 1471-2172
    ISSN (online) 1471-2172
    ISSN 1471-2172
    DOI 10.1186/s12865-022-00480-w
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  10. Article ; Online: Differentiation of Individuals Previously Infected with and Vaccinated for SARS-CoV-2 in an Inner-City Emergency Department.

    Beck, Evan J / Hsieh, Yu-Hsiang / Fernandez, Reinaldo E / Dashler, Gaby / Egbert, Emily R / Truelove, Shawn A / Garliss, Caroline / Wang, Richard / Bloch, Evan M / Shrestha, Ruchee / Blankson, Joel / Cox, Andrea L / Manabe, Yukari C / Kickler, Thomas / Rothman, Richard E / Redd, Andrew D / Tobian, Aaron A R / Milstone, Aaron M / Quinn, Thomas C /
    Laeyendecker, Oliver

    Journal of clinical microbiology

    2022  Volume 60, Issue 3, Page(s) e0239021

    Abstract: Emergency departments (EDs) can serve as surveillance sites for infectious diseases. The objective of this study was to determine the burden of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and to monitor the prevalence of ... ...

    Abstract Emergency departments (EDs) can serve as surveillance sites for infectious diseases. The objective of this study was to determine the burden of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and to monitor the prevalence of vaccination against coronavirus disease 2019 (COVID-19) among patients attending an urban ED in Baltimore City. Using 1,914 samples of known exposure status, we developed an algorithm to differentiate previously infected, vaccinated, and unexposed individuals using a combination of antibody assays. We applied this testing algorithm to 4,360 samples from ED patients obtained in the spring of 2020 and 2021. Using multinomial logistic regression, we determined factors associated with infection and vaccination. For the algorithm, sensitivity and specificity for identifying vaccinated individuals were 100% and 99%, respectively, and 84% and 100% for previously infected individuals. Among the ED subjects, seroprevalence to SARS-CoV-2 increased from 2% to 24% between April 2020 and March 2021. Vaccination prevalence rose to 11% by mid-March 2021. Marked differences in burden of disease and vaccination coverage were seen by sex, race, and ethnicity. Hispanic patients, though accounting for 7% of the study population, had the highest relative burden of disease (17% of total infections) but with similar vaccination rates. Women and white individuals were more likely to be vaccinated than men or Black individuals. Individuals previously infected with SARS-CoV-2 can often be differentiated from vaccinated individuals using a serologic testing algorithm. The utility of this algorithm can aid in monitoring SARS-CoV-2 exposure and vaccination uptake frequencies and can potentially reflect gender, race, and ethnic health disparities.
    MeSH term(s) COVID-19/epidemiology ; COVID-19/prevention & control ; Emergency Service, Hospital ; Female ; Humans ; Male ; SARS-CoV-2 ; Seroepidemiologic Studies ; White People
    Language English
    Publishing date 2022-01-19
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, N.I.H., Intramural
    ZDB-ID 390499-4
    ISSN 1098-660X ; 0095-1137
    ISSN (online) 1098-660X
    ISSN 0095-1137
    DOI 10.1128/jcm.02390-21
    Database MEDical Literature Analysis and Retrieval System OnLINE

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