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  1. Article ; Online: A polygenic two-hit hypothesis for prostate cancer.

    Houlahan, Kathleen E / Livingstone, Julie / Fox, Natalie S / Kurganovs, Natalie / Zhu, Helen / Sietsma Penington, Jocelyn / Jung, Chol-Hee / Yamaguchi, Takafumi N / Heisler, Lawrence E / Jovelin, Richard / Costello, Anthony J / Pope, Bernard J / Kishan, Amar U / Corcoran, Niall M / Bristow, Robert G / Waszak, Sebastian M / Weischenfeldt, Joachim / He, Housheng H / Hung, Rayjean J /
    Hovens, Christopher M / Boutros, Paul C

    Journal of the National Cancer Institute

    2023  Volume 115, Issue 4, Page(s) 468–472

    Abstract: Prostate cancer is one of the most heritable cancers. Hundreds of germline polymorphisms have been linked to prostate cancer diagnosis and prognosis. Polygenic risk scores can predict genetic risk of a prostate cancer diagnosis. Although these scores ... ...

    Abstract Prostate cancer is one of the most heritable cancers. Hundreds of germline polymorphisms have been linked to prostate cancer diagnosis and prognosis. Polygenic risk scores can predict genetic risk of a prostate cancer diagnosis. Although these scores inform the probability of developing a tumor, it remains unknown how germline risk influences the tumor molecular evolution. We cultivated a cohort of 1250 localized European-descent patients with germline and somatic DNA profiling. Men of European descent with higher genetic risk were diagnosed earlier and had less genomic instability and fewer driver genes mutated. Higher genetic risk was associated with better outcome. These data imply a polygenic "two-hit" model where germline risk reduces the number of somatic alterations required for tumorigenesis. These findings support further clinical studies of polygenic risk scores as inexpensive and minimally invasive adjuncts to standard risk stratification. Further studies are required to interrogate generalizability to more ancestrally and clinically diverse populations.
    MeSH term(s) Male ; Humans ; Prostatic Neoplasms/genetics ; Prostatic Neoplasms/pathology ; Risk Factors ; Prognosis ; Genetic Predisposition to Disease
    Language English
    Publishing date 2023-01-05
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2992-0
    ISSN 1460-2105 ; 0027-8874 ; 0198-0157
    ISSN (online) 1460-2105
    ISSN 0027-8874 ; 0198-0157
    DOI 10.1093/jnci/djad001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Ten Simple Rules for a Bioinformatics Journal Club.

    Lonsdale, Andrew / Sietsma Penington, Jocelyn / Rice, Timothy / Walker, Michael / Dashnow, Harriet

    PLoS computational biology

    2016  Volume 12, Issue 1, Page(s) e1004526

    MeSH term(s) Coffee ; Computational Biology/education ; Computational Biology/organization & administration ; Humans ; Peer Group ; Periodicals as Topic ; Time Factors
    Chemical Substances Coffee
    Language English
    Publishing date 2016-01
    Publishing country United States
    Document type Editorial
    ZDB-ID 2193340-6
    ISSN 1553-7358 ; 1553-734X
    ISSN (online) 1553-7358
    ISSN 1553-734X
    DOI 10.1371/journal.pcbi.1004526
    Database MEDical Literature Analysis and Retrieval System OnLINE

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