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  1. Article ; Online: Examining Gender Disparities Among Physicians When Sample Sizes Differ.

    Manoj, Matthew Antony / Singh, Tanya

    JAMA surgery

    2024  Volume 159, Issue 4, Page(s) 467–468

    MeSH term(s) Humans ; Sample Size ; Physicians
    Language English
    Publishing date 2024-01-17
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2701841-6
    ISSN 2168-6262 ; 2168-6254
    ISSN (online) 2168-6262
    ISSN 2168-6254
    DOI 10.1001/jamasurg.2023.7021
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  2. Article: Genome recoding: a review of basic concepts, current research and future prospects of virus attenuation for controlling plant viral diseases

    Kumar, Vinay / Singh, Tanya

    Journal of plant biochemistry and biotechnology. 2021 June, v. 30, no. 2

    2021  

    Abstract: Plants are very susceptible to pathogens and every year, 25% of crop loss is caused by various types of pathogens including viruses. Many different strategies are being used for developing resistance against virus infection, including RNA silencing, and ... ...

    Abstract Plants are very susceptible to pathogens and every year, 25% of crop loss is caused by various types of pathogens including viruses. Many different strategies are being used for developing resistance against virus infection, including RNA silencing, and the genome editing including CRISPR-Cas-9 but these may produce variants/recombinants and could cause the problems for future crops. Another promising approach named as genome recoding or rewriting would be a better potential tool for controlling viral infections in plants. It relies on the concepts of replacement of synonymous codons, change in codon bias, codon pair bias and dinucleotide content. Recoding of the genome does not alter the amino acid sequences but it affects the expression level and translation efficiency. In the present report, the concept of synonymous codons, the basics of genome recoding and the possible strategies to generate genome recoded organisms are provided in details. Viral attenuation has been achieved by consideration of dinucleotide bias and codon pair bias manipulations and used in the synthesis of vaccines against various types of pathogenic bacteria and viruses. The idea of the future scope of genome recoding for developing virus-resistant plants and their challenges for the same are also comprehensively discussed. Although genome recoding is not yet tested on plants, however it could be very helpful in controlling plant viral diseases. So, it is a novel emerging area of research for developing viral resistant plants and thus would help in minimizing the agricultural losses in the near future.
    Keywords RNA ; amino acids ; biotechnology ; codon usage ; crop losses ; plant biochemistry ; viruses
    Language English
    Dates of publication 2021-06
    Size p. 221-232.
    Publishing place Springer India
    Document type Article
    Note Review
    ZDB-ID 2206337-7
    ISSN 0974-1275 ; 0971-7811
    ISSN (online) 0974-1275
    ISSN 0971-7811
    DOI 10.1007/s13562-020-00583-8
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  3. Article ; Online: Examining birth preparedness and complication readiness: a systematic review and meta-analysis of pregnant and recently delivered women in India.

    Singh, Tanya / Tripathy, Brajaraj / Pandey, Anuj Kumar / Gautam, Diksha / Mishra, Sidharth Sekhar

    BMC women's health

    2024  Volume 24, Issue 1, Page(s) 119

    Abstract: Background: Birth preparedness and complication readiness (BPCR) is an essential component of safe motherhood programs. This study aims to systematically identify and synthesize available evidence on birth preparedness and complication readiness among ... ...

    Abstract Background: Birth preparedness and complication readiness (BPCR) is an essential component of safe motherhood programs. This study aims to systematically identify and synthesize available evidence on birth preparedness and complication readiness among pregnant and recently delivered women in India.
    Methods: The study followed PRISMA guidelines and used databases such as PubMed, Cochrane Library, and ProQuest. Joanna Briggs Institute [JBI] Tool was used for critical appraisal of studies. The meta-analysis was conducted using Comprehensive Meta-Analysis [CMA] tool and R studio software. Statistical heterogeneity was evaluated using visual inspection of the forest plot, Cochran's Q test, and the I
    Result: Thirty-five cross-sectional studies reported knowledge on one or more components of birth preparedness [BP], whilst knowledge on complication readiness [CR] or danger signs was reported in 34 included studies. Utilizing the random effect model, the pooled result showed that only about half of the women [49%; 95% CI: 44%, 53%] were aware on BPCR components. This result ranged between 15% [95% CI: 12%, 19%] to 79% [95% CI: 72%, 84%] in Maharashtra and Karnataka respectively [I
    Conclusion: Our study highlights the low prevalence of BPCR in India and the factors associated with it. Scaling up cost-effective interventions like BPCR that have a positive overall effect is necessary. Authors strongly suggests that birth preparedness and complication readiness should be given utmost importance to reduce maternal morbidity and mortality to achieve the Sustainable Development Goals. Consideration should be given to fortifying existing resources, such as frontline workers and primary healthcare, as a strategic approach to augmenting the effectiveness of awareness initiatives.
    MeSH term(s) Female ; Humans ; Pregnancy ; Cross-Sectional Studies ; Delivery, Obstetric ; Health Knowledge, Attitudes, Practice ; India ; Pregnancy Complications/epidemiology ; Prenatal Care
    Language English
    Publishing date 2024-02-14
    Publishing country England
    Document type Meta-Analysis ; Systematic Review ; Journal Article
    ZDB-ID 2050444-5
    ISSN 1472-6874 ; 1472-6874
    ISSN (online) 1472-6874
    ISSN 1472-6874
    DOI 10.1186/s12905-024-02932-4
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  4. Article ; Online: Paenibacillus lentimorbus alleviates nutrient deficiency-induced stress in Zea mays by modulating root system architecture, auxin signaling, and metabolic pathways.

    Singh, Tanya / Bisht, Nikita / Ansari, Mohd Mogees / Mishra, Shashank Kumar / Chauhan, Puneet Singh

    Plant cell reports

    2024  Volume 43, Issue 2, Page(s) 49

    Abstract: Key message: Paenibacillus lentimorbus reprograms auxin signaling and metabolic pathways for modulating root system architecture to mitigate nutrient deficiency in maize crops. The arable land across the world is having deficiency and disproportionate ... ...

    Abstract Key message: Paenibacillus lentimorbus reprograms auxin signaling and metabolic pathways for modulating root system architecture to mitigate nutrient deficiency in maize crops. The arable land across the world is having deficiency and disproportionate nutrients, limiting crop productivity. In this study, the potential of plant growth-promoting rhizobacteria (PGPR) viz., Pseudomonas putida, Paenibacillus lentimorbus, and their consortium was explored for growth promotion in maize (Zea mays) under nutrient-deficient conditions. PGPR inoculation improved the overall health of plants under nutrient-deficient conditions. The PGPR inoculation significantly improved the root system architecture and also induced changes in root cortical aerenchyma. Based on plant growth and physiological parameters inoculation with P. lentimorbus performed better as compared to P. putida, consortium, and uninoculated control. Furthermore, expression of auxin signaling (rum1, rul1, lrp1, rtcs, rtcl) and root hair development (rth)-related genes modulated the root development process to improve nutrient acquisition and tolerance to nutrient-deficient conditions in P. lentimorbus inoculated maize plants. Further, GC-MS analysis indicated the involvement of metabolites including carbohydrates and organic acids due to the interaction between maize roots and P. lentimorbus under nutrient-deficient conditions. These findings affirm that P. lentimorbus enhance overall plant growth by modulating the root system of maize to provide better tolerance to nutrient-deficient condition.
    MeSH term(s) Zea mays/genetics ; Bacillus ; Metabolic Networks and Pathways ; Nutrients ; Indoleacetic Acids/metabolism ; Plant Roots/metabolism ; Paenibacillus
    Chemical Substances Indoleacetic Acids
    Language English
    Publishing date 2024-02-01
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 8397-5
    ISSN 1432-203X ; 0721-085X ; 0721-7714
    ISSN (online) 1432-203X
    ISSN 0721-085X ; 0721-7714
    DOI 10.1007/s00299-023-03133-3
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  5. Article ; Online: Short-term improvement of heat tolerance in naturally growing

    Singh, Tanya / Sakai, Kazuhiko / Ishida-Castañeda, Jun / Iguchi, Akira

    PeerJ

    2023  Volume 11, Page(s) e14629

    Abstract: Mass bleaching and subsequent mortality of reef corals by heat stress has increased globally since the late 20th century, due to global warming. Some experimental studies have reported that corals may increase heat tolerance for short periods, but only a ...

    Abstract Mass bleaching and subsequent mortality of reef corals by heat stress has increased globally since the late 20th century, due to global warming. Some experimental studies have reported that corals may increase heat tolerance for short periods, but only a few such studies have monitored naturally-growing colonies. Therefore, we monitored the survival, growth, and bleaching status of
    MeSH term(s) Animals ; Anthozoa ; Coral Reefs ; Thermotolerance ; Temperature ; Heat-Shock Response
    Language English
    Publishing date 2023-01-05
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2703241-3
    ISSN 2167-8359 ; 2167-8359
    ISSN (online) 2167-8359
    ISSN 2167-8359
    DOI 10.7717/peerj.14629
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  6. Article ; Online: The hidden harmony: Exploring ROS-phytohormone nexus for shaping plant root architecture in response to environmental cues.

    Singh, Tanya / Bisht, Nikita / Ansari, Mohd Mogees / Chauhan, Puneet Singh

    Plant physiology and biochemistry : PPB

    2023  Volume 206, Page(s) 108273

    Abstract: Root system architecture, encompassing lateral roots and root hairs, plays a vital in overall plant growth and stress tolerance. Reactive oxygen species (ROS) and plant hormones intricately regulate root growth and development, serving as signaling ... ...

    Abstract Root system architecture, encompassing lateral roots and root hairs, plays a vital in overall plant growth and stress tolerance. Reactive oxygen species (ROS) and plant hormones intricately regulate root growth and development, serving as signaling molecules that govern processes such as cell proliferation and differentiation. Manipulating the interplay between ROS and hormones has the potential to enhance nutrient absorption, stress tolerance, and agricultural productivity. In this review, we delve into how studying these processes provides insights into how plants respond to environmental changes and optimize growth patterns to better control cellular processes and stress responses in crops. We discuss various factors and complex signaling networks that may exist among ROS and phytohormones during root development. Additionally, the review highlights possible role of reactive nitrogen species (RNS) in ROS-phytohormone interactions and in shaping root system architecture according to environmental cues.
    MeSH term(s) Plant Growth Regulators/pharmacology ; Reactive Oxygen Species ; Cues ; Crops, Agricultural ; Plant Roots
    Chemical Substances Plant Growth Regulators ; Reactive Oxygen Species
    Language English
    Publishing date 2023-12-12
    Publishing country France
    Document type Journal Article ; Review
    ZDB-ID 742978-2
    ISSN 1873-2690 ; 0981-9428
    ISSN (online) 1873-2690
    ISSN 0981-9428
    DOI 10.1016/j.plaphy.2023.108273
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  7. Article ; Online: Prevention of avoidable blindness is a social imperative: Facile economic models do not help.

    Singh, Manoj / Bhardwaj, Deepali / Singh, Tanya / Kaushik, Tanuj / Puliyel, Jacob

    Indian journal of ophthalmology

    2023  Volume 71, Issue 6, Page(s) 2605

    MeSH term(s) Humans ; Blindness/epidemiology ; Blindness/etiology ; Blindness/prevention & control
    Language English
    Publishing date 2023-06-15
    Publishing country India
    Document type Letter
    ZDB-ID 187392-1
    ISSN 1998-3689 ; 0301-4738
    ISSN (online) 1998-3689
    ISSN 0301-4738
    DOI 10.4103/IJO.IJO_3142_22
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    Zs.B 329: Show issues Location:
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    Zs.MO 598: Show issues

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  8. Book ; Online: Object counting from aerial remote sensing images

    Singh, Tanya / Gangloff, Hugo / Pham, Minh-Tan

    application to wildlife and marine mammals

    2023  

    Abstract: Anthropogenic activities pose threats to wildlife and marine fauna, prompting the need for efficient animal counting methods. This research study utilizes deep learning techniques to automate counting tasks. Inspired by previous studies on crowd and ... ...

    Abstract Anthropogenic activities pose threats to wildlife and marine fauna, prompting the need for efficient animal counting methods. This research study utilizes deep learning techniques to automate counting tasks. Inspired by previous studies on crowd and animal counting, a UNet model with various backbones is implemented, which uses Gaussian density maps for training, bypassing the need of training a detector. The new model is applied to the task of counting dolphins and elephants in aerial images. Quantitative evaluation shows promising results, with the EfficientNet-B5 backbone achieving the best performance for African elephants and the ResNet18 backbone for dolphins. The model accurately locates animals despite complex image background conditions. By leveraging artificial intelligence, this research contributes to wildlife conservation efforts and enhances coexistence between humans and wildlife through efficient object counting without detection from aerial remote sensing.

    Comment: 4 pages, to appear in IGARSS 2023
    Keywords Computer Science - Computer Vision and Pattern Recognition
    Subject code 004
    Publishing date 2023-06-17
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article: Emerging therapeutic role of apolipoprotein-e mimetic peptides in neurological disorders

    Singh, Tanya / Mazumder, Avijit / Prabhakar, Vishnu / Kanda, Anmol

    Allelopathy journal

    2023  Volume 59, Issue 2, Page(s) 251

    Document type Article
    ZDB-ID 1232515-6
    ISSN 0971-4693
    Database Current Contents Medicine

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  10. Article ; Online: Separate and combined effects of elevated pCO2 and temperature on the branching reef corals Acropora digitifera and Montipora digitata

    Manullang, Cristiana / Singh, Tanya / Sakai, Keinan / Miyagi, Aika / Iwasaki, Aiko / Nojiri, Yukihiro / Iguchi, Akira

    Marine Environmental Research. 2023 May 23, p.106030-

    2023  , Page(s) 106030–

    Abstract: Ocean acidification (OA) and warming (OW) are major global threats to coral reef ecosystems; however, studies on their combined effects (OA + OW) are scarce. Therefore, we evaluated the effects of OA, OW, and OA + OW in the branching reef corals Acropora ...

    Abstract Ocean acidification (OA) and warming (OW) are major global threats to coral reef ecosystems; however, studies on their combined effects (OA + OW) are scarce. Therefore, we evaluated the effects of OA, OW, and OA + OW in the branching reef corals Acropora digitifera and Montipora digitata, which have been found to respond differently to environmental changes. Our results indicate that OW has a greater impact on A. digitifera and M. digitata than OA and that the former species is more vulnerable to OW than the latter. OW was the main stressor for increased mortality and decreased calcification in the OA + OW group, and the effect of OA + OW was additive in both species. Our findings suggest that the relative abundance and cover of M. digitata are expected to increase whereas those of A. digitifera may decrease in the near future in Okinawa.
    Keywords Acropora ; Ryukyu Archipelago ; calcification ; carbon dioxide enrichment ; coral reefs ; mortality ; ocean acidification ; research ; temperature ; Ocean warming ; Reef coral ; Coral calcification ; Combined effect ; Additive ; Acropora digitifera ; Montipora digitata
    Language English
    Dates of publication 2023-0523
    Publishing place Elsevier Ltd
    Document type Article ; Online
    Note Pre-press version
    ZDB-ID 1502505-6
    ISSN 1879-0291 ; 0141-1136
    ISSN (online) 1879-0291
    ISSN 0141-1136
    DOI 10.1016/j.marenvres.2023.106030
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