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  1. Article ; Online: Mechanisms of ion transport regulation by HNF1β in the kidney: beyond transcriptional regulation of channels and transporters.

    Tholen, Lotte E / Hoenderop, Joost G J / de Baaij, Jeroen H F

    Pflugers Archiv : European journal of physiology

    2022  Volume 474, Issue 8, Page(s) 901–916

    Abstract: Hepatocyte nuclear factor 1β (HNF1β) is a transcription factor essential for the development and function of the kidney. Mutations in and deletions of HNF1β cause autosomal dominant tubule interstitial kidney disease (ADTKD) subtype HNF1β, which is ... ...

    Abstract Hepatocyte nuclear factor 1β (HNF1β) is a transcription factor essential for the development and function of the kidney. Mutations in and deletions of HNF1β cause autosomal dominant tubule interstitial kidney disease (ADTKD) subtype HNF1β, which is characterized by renal cysts, diabetes, genital tract malformations, and neurodevelopmental disorders. Electrolyte disturbances including hypomagnesemia, hyperuricemia, and hypocalciuria are common in patients with ADTKD-HNF1β. Traditionally, these electrolyte disturbances have been attributed to HNF1β-mediated transcriptional regulation of gene networks involved in ion transport in the distal part of the nephron including FXYD2, CASR, KCNJ16, and FXR. In this review, we propose additional mechanisms that may contribute to the electrolyte disturbances observed in ADTKD-HNF1β patients. Firstly, kidney development is severely affected in Hnf1b-deficient mice. HNF1β is required for nephron segmentation, and the absence of the transcription factor results in rudimentary nephrons lacking mature proximal tubule, loop of Henle, and distal convoluted tubule cluster. In addition, HNF1β is proposed to be important for apical-basolateral polarity and tight junction integrity in the kidney. Interestingly, cilia formation is unaffected by Hnf1b defects in several models, despite the HNF1β-mediated transcriptional regulation of many ciliary genes. To what extent impaired nephron segmentation, apical-basolateral polarity, and cilia function contribute to electrolyte disturbances in HNF1β patients remains elusive. Systematic phenotyping of Hnf1b mouse models and the development of patient-specific kidney organoid models will be essential to advance future HNF1β research.
    MeSH term(s) Animals ; Electrolytes ; Hepatocyte Nuclear Factor 1-beta/metabolism ; Ion Transport ; Kidney/metabolism ; Membrane Transport Proteins ; Mice ; Nephrons/metabolism ; Transcription Factors/metabolism
    Chemical Substances Electrolytes ; Hnf1b protein, mouse ; Membrane Transport Proteins ; Transcription Factors ; Hepatocyte Nuclear Factor 1-beta (138674-15-4)
    Language English
    Publishing date 2022-05-13
    Publishing country Germany
    Document type Journal Article ; Review ; Research Support, Non-U.S. Gov't
    ZDB-ID 6380-0
    ISSN 1432-2013 ; 0031-6768
    ISSN (online) 1432-2013
    ISSN 0031-6768
    DOI 10.1007/s00424-022-02697-5
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Correction to: Mechanisms of ion transport regulation by HNF1β in the kidney: beyond transcriptional regulation of channels and transporters.

    Tholen, Lotte E / Hoenderop, Joost G J / de Baaij, Jeroen H F

    Pflugers Archiv : European journal of physiology

    2022  Volume 474, Issue 8, Page(s) 917

    Language English
    Publishing date 2022-05-20
    Publishing country Germany
    Document type Published Erratum
    ZDB-ID 6380-0
    ISSN 1432-2013 ; 0031-6768
    ISSN (online) 1432-2013
    ISSN 0031-6768
    DOI 10.1007/s00424-022-02706-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Transcription factor HNF1β controls a transcriptional network regulating kidney cell structure and tight junction integrity.

    Tholen, Lotte E / Latta, Femke / Martens, Joost H A / Hoenderop, Joost G J / de Baaij, Jeroen H F

    American journal of physiology. Renal physiology

    2022  Volume 324, Issue 2, Page(s) F211–F224

    Abstract: Mutations in the hepatocyte nuclear factor (HNF)1β gene ( ...

    Abstract Mutations in the hepatocyte nuclear factor (HNF)1β gene (
    MeSH term(s) Mice ; Animals ; Transcription Factors/metabolism ; Gene Regulatory Networks ; Tight Junctions/metabolism ; Kidney/metabolism ; Epithelial Cells/metabolism ; Hepatocyte Nuclear Factors/genetics ; Hepatocyte Nuclear Factors/metabolism ; Electrolytes/metabolism ; Hepatocyte Nuclear Factor 1-beta/genetics
    Chemical Substances Transcription Factors ; Hepatocyte Nuclear Factors ; Electrolytes ; Hepatocyte Nuclear Factor 1-beta (138674-15-4)
    Language English
    Publishing date 2022-12-22
    Publishing country United States
    Document type Journal Article
    ZDB-ID 603837-2
    ISSN 1522-1466 ; 0363-6127
    ISSN (online) 1522-1466
    ISSN 0363-6127
    DOI 10.1152/ajprenal.00199.2022
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Bifunctional protein PCBD2 operates as a co-factor for hepatocyte nuclear factor 1β and modulates gene transcription.

    Tholen, Lotte E / Bos, Caro / Jansen, Pascal W T C / Venselaar, Hanka / Vermeulen, Michiel / Hoenderop, Joost G J / de Baaij, Jeroen H F

    FASEB journal : official publication of the Federation of American Societies for Experimental Biology

    2021  Volume 35, Issue 4, Page(s) e21366

    Abstract: Hepatocyte nuclear factor 1β (HNF1β) is an essential transcription factor in development of the kidney, liver, and pancreas. HNF1β-mediated transcription of target genes is dependent on the cell type and the development stage. Nevertheless, the ... ...

    Abstract Hepatocyte nuclear factor 1β (HNF1β) is an essential transcription factor in development of the kidney, liver, and pancreas. HNF1β-mediated transcription of target genes is dependent on the cell type and the development stage. Nevertheless, the regulation of HNF1β function by enhancers and co-factors that allow this cell-specific transcription is largely unknown. To map the HNF1β interactome we performed mass spectrometry in a mouse kidney inner medullary collecting duct cell line. Pterin-4a-carbinolamine dehydratase 2 (PCBD2) was identified as a novel interaction partner of HNF1β. PCBD2 and its close homolog PCBD1 shuttle between the cytoplasm and nucleus to exert their enzymatic and transcriptional activities. Although both PCBD proteins share high sequence identity (48% and 88% in HNF1 recognition helix), their tissue expression patterns are unique. PCBD1 is most abundant in kidney and liver while PCBD2 is also abundant in lung, spleen, and adipose tissue. Using immunolocalization studies and biochemical analysis we show that in presence of HNF1β the nuclear localization of PCBD1 and PCBD2 increases significantly. Promoter luciferase assays demonstrate that co-factors PCBD1 and PCBD2 differentially regulate the ability of HNF1β to activate the promoters of transcriptional targets important in renal electrolyte homeostasis. Deleting the N-terminal sequence of PCBD2, not found in PCBD1, diminished the differential effects of the co-factors on HNF1β activity. All together these results indicate that PCBD1 and PCBD2 can exert different effects on HNF1β-mediated transcription. Future studies should confirm whether these unique co-factor activities also apply to HNF1β-target genes involved in additional processes besides ion transport in the kidney.
    MeSH term(s) Animals ; Cell Line ; Gene Expression Regulation ; HEK293 Cells ; Hepatocyte Nuclear Factor 1-beta/genetics ; Hepatocyte Nuclear Factor 1-beta/metabolism ; Humans ; Hydro-Lyases/genetics ; Hydro-Lyases/metabolism ; Mass Spectrometry ; Mice ; Models, Molecular ; Potassium Channels, Inwardly Rectifying/genetics ; Potassium Channels, Inwardly Rectifying/metabolism ; Promoter Regions, Genetic ; Protein Conformation ; Protein Transport ; Transcription, Genetic
    Chemical Substances HNF1B protein, human ; KCNJ16 protein, human ; Potassium Channels, Inwardly Rectifying ; Hepatocyte Nuclear Factor 1-beta (138674-15-4) ; Hydro-Lyases (EC 4.2.1.-) ; PCBD2 protein, human (EC 4.2.1.-) ; pterin-4a-carbinolamine dehydratase (EC 4.2.1.96)
    Language English
    Publishing date 2021-05-22
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 639186-2
    ISSN 1530-6860 ; 0892-6638
    ISSN (online) 1530-6860
    ISSN 0892-6638
    DOI 10.1096/fj.202002022R
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Framework From a Multidisciplinary Approach for Transitioning Variants of Unknown Significance From Clinical Genetic Testing in Kidney Disease to a Definitive Classification.

    Mirshahi, Uyenlinh L / Bhan, Ahana / Tholen, Lotte E / Fang, Brian / Chen, Guoli / Moore, Bryn / Cook, Adam / Anand, Prince Mohan / Patel, Kashyap / Haas, Mary E / Lotta, Luca A / Igarashi, Peter / de Baaij, Jeroen H F / Ferrè, Silvia / Hoenderop, Joost G J / Carey, David J / Chang, Alexander R

    Kidney international reports

    2022  Volume 7, Issue 9, Page(s) 2047–2058

    Abstract: Introduction: Monogenic causes in over 300 kidney-associated genes account for approximately 12% of end stage kidney disease (ESKD) cases. Advances in sequencing and large customized panels enable the noninvasive diagnosis of monogenic kidney disease at ...

    Abstract Introduction: Monogenic causes in over 300 kidney-associated genes account for approximately 12% of end stage kidney disease (ESKD) cases. Advances in sequencing and large customized panels enable the noninvasive diagnosis of monogenic kidney disease at relatively low cost, thereby allowing for more precise management for patients and their families. A major challenge is interpreting rare variants, many of which are classified as variants of unknown significance (VUS). We present a framework in which we thoroughly evaluated and provided evidence of pathogenicity for
    Methods: A blueprint was designed by a multidisciplinary team of clinicians, molecular biologists, and diagnostic geneticists. The blueprint included using a health system-based cohort with genetic and clinical information to perform deep phenotyping of VUS heterozygotes to identify the candidate VUS and rule out other VUS, examination of existing genetic databases, as well as functional testing.
    Results: Our approach demonstrated evidence for pathogenicity for
    Conclusion: Determination of a molecular diagnosis for the example family allows for proper surveillance and management of
    Language English
    Publishing date 2022-07-07
    Publishing country United States
    Document type Journal Article
    ISSN 2468-0249
    ISSN (online) 2468-0249
    DOI 10.1016/j.ekir.2022.06.014
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Deletion of Cytoplasmic Double-Stranded RNA Sensors Does Not Uncover Viral Small Interfering RNA Production in Human Cells.

    Schuster, Susan / Tholen, Lotte E / Overheul, Gijs J / van Kuppeveld, Frank J M / van Rij, Ronald P

    mSphere

    2017  Volume 2, Issue 4

    Abstract: Antiviral immunity in insects and plants is mediated by the RNA interference (RNAi) pathway in which viral long double-stranded RNA (dsRNA) is processed into small interfering RNAs (siRNAs) by Dicer enzymes. Although this pathway is evolutionarily ... ...

    Abstract Antiviral immunity in insects and plants is mediated by the RNA interference (RNAi) pathway in which viral long double-stranded RNA (dsRNA) is processed into small interfering RNAs (siRNAs) by Dicer enzymes. Although this pathway is evolutionarily conserved, its involvement in antiviral defense in mammals is the subject of debate. In vertebrates, recognition of viral RNA induces a sophisticated type I interferon (IFN)-based immune response, and it has been proposed that this response masks or inhibits antiviral RNAi. To test this hypothesis, we analyzed viral small RNA production in differentiated cells deficient in the cytoplasmic RNA sensors RIG-I and MDA5. We did not detect 22-nucleotide (nt) viral siRNAs upon infection with three different positive-sense RNA viruses. Our data suggest that the depletion of cytoplasmic RIG-I-like sensors is not sufficient to uncover viral siRNAs in differentiated cells.
    Language English
    Publishing date 2017-08-16
    Publishing country United States
    Document type Journal Article
    ISSN 2379-5042
    ISSN 2379-5042
    DOI 10.1128/mSphere.00333-17
    Database MEDical Literature Analysis and Retrieval System OnLINE

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