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Article ; Online: Membrane contact site detection (MCS-DETECT) reveals dual control of rough mitochondria-ER contacts.

Cardoen, Ben / Vandevoorde, Kurt R / Gao, Guang / Ortiz-Silva, Milene / Alan, Parsa / Liu, William / Tiliakou, Ellie / Vogl, A Wayne / Hamarneh, Ghassan / Nabi, Ivan R

The Journal of cell biology

2023  Volume 223, Issue 1

Abstract: Identification and morphological analysis of mitochondria-ER contacts (MERCs) by fluorescent microscopy is limited by subpixel resolution interorganelle distances. Here, the membrane contact site (MCS) detection algorithm, MCS-DETECT, reconstructs ... ...

Abstract Identification and morphological analysis of mitochondria-ER contacts (MERCs) by fluorescent microscopy is limited by subpixel resolution interorganelle distances. Here, the membrane contact site (MCS) detection algorithm, MCS-DETECT, reconstructs subpixel resolution MERCs from 3D super-resolution image volumes. MCS-DETECT shows that elongated ribosome-studded riboMERCs, present in HT-1080 but not COS-7 cells, are morphologically distinct from smaller smooth contacts and larger contacts induced by mitochondria-ER linker expression in COS-7 cells. RiboMERC formation is associated with increased mitochondrial potential, reduced in Gp78 knockout HT-1080 cells and induced by Gp78 ubiquitin ligase activity in COS-7 and HeLa cells. Knockdown of riboMERC tether RRBP1 eliminates riboMERCs in both wild-type and Gp78 knockout HT-1080 cells. By MCS-DETECT, Gp78-dependent riboMERCs present complex tubular shapes that intercalate between and contact multiple mitochondria. MCS-DETECT of 3D whole-cell super-resolution image volumes, therefore, identifies novel dual control of tubular riboMERCs, whose formation is dependent on RRBP1 and size modulated by Gp78 E3 ubiquitin ligase activity.
MeSH term(s) Humans ; Endoplasmic Reticulum/metabolism ; HeLa Cells ; Mitochondria/metabolism ; Mitochondrial Membranes/metabolism ; Ubiquitin-Protein Ligases/metabolism ; Ubiquitination ; COS Cells ; Animals ; Chlorocebus aethiops ; Ribosomes/metabolism
Chemical Substances Ubiquitin-Protein Ligases (EC 2.3.2.27)
Language English
Publishing date 2023-11-10
Publishing country United States
Document type Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID 218154-x
ISSN 1540-8140 ; 0021-9525
ISSN (online) 1540-8140
ISSN 0021-9525
DOI 10.1083/jcb.202206109
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