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  1. Article: A Novel Familial Case Report of Genetic Syndrome Mimicking Congenital TORCH infections; Pseudo-TORCH Syndrome 2.

    Sehrish, Iram / Sunitha, Tella / Srilekha, Avvari / Gupta, Aayushi / Nallari, Pratibha / Venkateshwari, Ananthapur

    Journal of reproduction & infertility

    2022  Volume 23, Issue 2, Page(s) 135–138

    Abstract: Background: Pseudo-TORCH syndrome (PTS) is a group of autosomal recessive disorders that clinically and radiologically mimic TORCH congenital infections. The prevalence of pseudo-TORCH syndrome 2 is 1 in 1,000,000 cases worldwide. This novel disorder is ...

    Abstract Background: Pseudo-TORCH syndrome (PTS) is a group of autosomal recessive disorders that clinically and radiologically mimic TORCH congenital infections. The prevalence of pseudo-TORCH syndrome 2 is 1 in 1,000,000 cases worldwide. This novel disorder is extremely rare, and is generally detected by prenatal diagnosis through next generation sequencing (NGS) during pregnancy. In this study, a familial case of pseudo-TORCH syndrome 2 with novel non-sense mutation in the ubiquitin-specific peptidase 18 (USP 18) gene in the parents was reported, who are heterozygous asymptomatic carriers; however, all children have inherited a homozygous pathogenic form of USP18, which is an important negative regulator of type I interferon (IFN) signal transduction. To the best of our knowledge, this is the first case of a novel mutation of USP18 seen in a family with pseudo-TORCH syndrome 2 (PTS 2) from India.
    Case presentation: A 23-year-old pregnant woman with bad obstetric history, including intrauterine and neonatal mortality was referred to the Institute of Genetics in the year 2021 for clinical and genetic evaluation. Advanced clinical exome sequencing of the parents and the fetus revealed heterozygous carrier status in parents and homozygous mutation in USP 18 gene in the progeny leading to pseudo-TORCH-2 syndrome.
    Conclusion: The present case highlights the significance of carrier screening, prenatal diagnosis, and genetic counseling in couples with bad obstetric history for the detection of rare genetic disorders with poor prognosis.
    Language English
    Publishing date 2022-08-17
    Publishing country Iran
    Document type Case Reports
    ZDB-ID 2548922-7
    ISSN 2251-676X ; 1735-8507 ; 2228-5482 ; 1726-7536
    ISSN (online) 2251-676X ; 1735-8507
    ISSN 2228-5482 ; 1726-7536
    DOI 10.18502/jri.v23i2.8999
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Association of ABCC8 and KCNJ11 gene variants with type 1 diabetes in south Indians

    Shilpa Reddy / Sailaja Maddhuri / Pratibha Nallari / Venkateshwari Ananthapur / Srinivas Kalyani / Murali Krishna / Nirmala Cherkuri / Sireesha Patibandala

    Egyptian Journal of Medical Human Genetics, Vol 22, Iss 1, Pp 1-

    2021  Volume 11

    Abstract: Abstract Background Type 1 diabetes mellitus (TIDM) is a polygenic disorder with the involvement of several genetic and environmental risk factors. Mutation in genes namely ABCC8 and KCNJ11 disrupt the potentiality of KATP channel and regulates the ... ...

    Abstract Abstract Background Type 1 diabetes mellitus (TIDM) is a polygenic disorder with the involvement of several genetic and environmental risk factors. Mutation in genes namely ABCC8 and KCNJ11 disrupt the potentiality of KATP channel and regulates the secretion of insulin by detecting a change in the blood glucose level and consequently maintains glucose homeostasis. The present study was designed to investigate the association of ABCC8 and KCNJ11gene polymorphisms with type 1 diabetes. A case-control study was conducted enrolling 60 cases suffering from T1DM and 60 healthy controls of comparable age and sex. Gene variations were determined by PCR-RFLP and ARMS-PCR method. Results The ABCC8-3C > T (rs1799854) variation was found to be significantly associated with T1DM (p<0.01) and “CT” genotype was found to be predominant in T1DM with a threefold increased risk to diabetes and the association was statistically significant. However, we did not find any significant association of C>T (rs1801261) polymorphism of ABCC8 with T1DM. A significant association was observed for genetic variation at rs5219 C>T polymorphism and the frequency of TT genotype was found to be significantly higher in patients (46.7%) than in controls (21.7%), indicating the significant role of the KCNJ11 rs5219 variant in T1DM susceptibility (p<0.001), but we did not observe any significant association of G>A (rs5215) polymorphism of KCNJ11 with T1DM. In addition, haplotype analysis of the two genes revealed four haplotypes such as T-C-G-T, T-C-A-T, C-C-G-T, and T-T-G-T as risk haplotypes for type 1 diabetes (p<0.02) potentially making individual effects of these variants on the disease susceptibility, thereby indicating the synergistic role of these genes in the regulation of glucose homeostasis. Conclusions The present study highlights the importance of personalized medicine based on individual genetic profile.
    Keywords Type 1 diabetes ; KATP channel ; ABCC8 gene ; KCNJ11gene ; Insulin ; MODY ; Medicine (General) ; R5-920 ; Genetics ; QH426-470
    Subject code 616
    Language English
    Publishing date 2021-04-01T00:00:00Z
    Publisher SpringerOpen
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article ; Online: A novel de novo autosomal translocation 46, XX, t (5; 8) in a female with primary amenorrhea.

    Srilekha, Avvari / Mln, Deepika / Sunitha, Tella / Venkateshwari, Ananthapur

    European journal of obstetrics, gynecology, and reproductive biology

    2017  Volume 221, Page(s) 201–203

    MeSH term(s) Adolescent ; Amenorrhea/genetics ; Chromosomes, Human, Pair 5 ; Chromosomes, Human, Pair 8 ; Female ; Humans ; Translocation, Genetic
    Language English
    Publishing date 2017-12-29
    Publishing country Ireland
    Document type Case Reports ; Letter
    ZDB-ID 190605-7
    ISSN 1872-7654 ; 0301-2115 ; 0028-2243
    ISSN (online) 1872-7654
    ISSN 0301-2115 ; 0028-2243
    DOI 10.1016/j.ejogrb.2017.12.044
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: A Rare De Novo Balanced X; 1 Translocation in an Indian Female with Primary Amenorrhea.

    Venkateshwari, Ananthapur / Srilekha, Avvari / Veena, Koka / Sujatha, Madireddy / Jyothy, Akka

    Journal of reproduction & infertility

    2016  Volume 16, Issue 3, Page(s) 171–173

    Abstract: Background: Translocations involving X chromosome and an autosome are rather rare due to associated infertility in men and subfertility in women. X chromosome translocations are frequently associated with primary or secondary amenorrhea. In this report, ...

    Abstract Background: Translocations involving X chromosome and an autosome are rather rare due to associated infertility in men and subfertility in women. X chromosome translocations are frequently associated with primary or secondary amenorrhea. In this report, a case of primary amenorrhea with a de novo balanced reciprocal translocation was presented between chromosomes X and 1.
    Case presentation: A 24 year-old proposita with the complaint of primary amenorrhea was found to have hypoplastic uterus and streak gonads with a normal hormonal profile. Chromosomal analysis of the proband revealed a de novo translocation of 46, X, t(X; 1) (q21; p32) chromosomal constitution. Parental karyotypes of the proband showed normal karyotype.
    Conclusion: The observed translocation between chromosome X and 1 in the patient suggest either the disruption of a critical gene expression due to position effect or deletion of one or more essential genes in the disrupted long arm of the affected X chromosome. To the best of our knowledge, this is the first report from our ethnic group.
    Language English
    Publishing date 2016-02-13
    Publishing country Iran
    Document type Case Reports
    ZDB-ID 2548922-7
    ISSN 2251-676X ; 1735-8507 ; 2228-5482 ; 1726-7536
    ISSN (online) 2251-676X ; 1735-8507
    ISSN 2228-5482 ; 1726-7536
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Role of IL-6 -174(G/C) promoter polymorphism in the etiology of early-onset preeclampsia.

    Sowmya, Sabnavis / Ramaiah, Aruna / Nallari, Pratibha / Jyothy, Akka / Venkateshwari, Ananthapur

    Inflammation research : official journal of the European Histamine Research Society ... [et al.

    2015  Volume 64, Issue 6, Page(s) 433–439

    Abstract: Objective: To investigate the relationship between IL-6 -174G/C promoter polymorphism and preeclampsia.: Methods: A total of 140 preeclamptic women and 135 women with normal pregnancy were considered for the present study. A standard amplification ... ...

    Abstract Objective: To investigate the relationship between IL-6 -174G/C promoter polymorphism and preeclampsia.
    Methods: A total of 140 preeclamptic women and 135 women with normal pregnancy were considered for the present study. A standard amplification refractory mutation system PCR was carried out for genotyping of IL-6 G-174C promoter polymorphism. Genotypic distribution was compared with values predicted by Hardy-Weinberg equilibrium using χ (2) test. Odds ratios and their respective 95 % confidence intervals were used to measure the strength of association.
    Results: The frequencies observed, CC, GC and GG, were 53.5, 26.6 and 20 % in patients and 26.6, 23.7 and 49.6 % in the controls. There is a significant difference in the distribution of genotypes and alleles of IL-6 G-174 C between the two groups.
    Conclusion: The present study suggests that the IL-6 -174 promoter polymorphism is a major genetic regulator in the etiology of early-onset preeclampsia.
    MeSH term(s) Adult ; Aging/physiology ; Alleles ; Case-Control Studies ; Female ; Gene Frequency ; Genetic Predisposition to Disease ; Genotype ; Humans ; Interleukin-6/genetics ; Polymerase Chain Reaction ; Polymorphism, Genetic/genetics ; Pre-Eclampsia/epidemiology ; Pre-Eclampsia/genetics ; Pregnancy ; Promoter Regions, Genetic/genetics
    Chemical Substances Interleukin-6
    Language English
    Publishing date 2015-06
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1221794-3
    ISSN 1420-908X ; 1023-3830
    ISSN (online) 1420-908X
    ISSN 1023-3830
    DOI 10.1007/s00011-015-0823-z
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: A Dysmorphic Child with a Pericentric Inversion of Chromosome 8

    Venkateshwari Ananthapur / Srilekha Avvari / Sujatha Madireddi / Pratibha Nallari / Jyothy Akka

    Case Reports in Pediatrics, Vol

    2012  Volume 2012

    Keywords Pediatrics ; RJ1-570 ; Medicine ; R ; DOAJ:Pediatrics ; DOAJ:Medicine (General) ; DOAJ:Health Sciences
    Language English
    Publishing date 2012-01-01T00:00:00Z
    Publisher Hindawi Publishing Corporation
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article: Endothelin 1 gene as a modifier in dilated cardiomyopathy

    Matsa, Lova Satyanarayna / Pratibha Nallari / Someswar Rao Sagurthi / Swapna Nalla / Venkateshwari Ananthapur

    Gene. 2014 Sept. 15, v. 548

    2014  

    Abstract: Dilated cardiomyopathy (DCM) is a myocardial disease of unknown etiology with left ventricular dilatation and impaired myocardial contractility leading to heart failure. It is considered to be a multifactorial disorder with the interplay of both genetic ... ...

    Abstract Dilated cardiomyopathy (DCM) is a myocardial disease of unknown etiology with left ventricular dilatation and impaired myocardial contractility leading to heart failure. It is considered to be a multifactorial disorder with the interplay of both genetic and environmental factors. One of the possible genes implicated in DCM is endothelin 1 (EDN1). The genetic variants of EDN1 may be involved in the pathophysiology of DCM hence the entire EDN1 gene was screened to examine for the possible genotypic associations with DCM. A total of 115 DCM patients and 250 control subjects were included in the present study. PCR based SSCP analysis was carried out followed by commercial sequencing. Screening of EDN1 revealed two common and two rare polymorphisms. Allelic and genotypic frequencies were estimated in patient and control groups by appropriate statistical tests. The heterozygotes of insertion variation (+138A) were found to exhibit four-fold increase risk to DCM (OR=4.12, 95% CI 2.10–8.08; p=0.0001). The two rare variants (G>A transition (rs150035515) at c.90 and C>T transition (rs149399492) at c.119) observed in the present study were found to be unique in DCM. The secondary mRNA structures of these variations were found to have less free energy than wild type. The haplotype analysis revealed 4A–T to be risk haplotype for DCM (OR 5.90, 95% CI 2.29–15.25, p=0.0001). In conclusion, EDN1 polymorphisms (+138A, A30A, T40I) appear to play a significant role in the pathogenesis of DCM, as they influence the stability of protein. The increased EDN1 production may lead to constriction of coronary arteries, reducing coronary blood flow which may in turn increase the load on left ventricle, impairing contractility of the heart resulting in a DCM phenotype, an end stage of heart failure.
    Keywords blood flow ; cardiomyopathy ; coronary vessels ; endothelins ; environmental factors ; etiology ; genetic variation ; Gibbs free energy ; haplotypes ; heart ; heart failure ; heterozygosity ; messenger RNA ; modifiers (genes) ; pathogenesis ; pathophysiology ; patients ; phenotype ; polymerase chain reaction ; risk ; screening ; single-stranded conformational polymorphism ; statistical analysis
    Language English
    Dates of publication 2014-0915
    Size p. 256-262.
    Publishing place Elsevier B.V.
    Document type Article
    ZDB-ID 391792-7
    ISSN 1879-0038 ; 0378-1119
    ISSN (online) 1879-0038
    ISSN 0378-1119
    DOI 10.1016/j.gene.2014.07.043
    Database NAL-Catalogue (AGRICOLA)

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  8. Article: A Common SNP of IL-10 (-1082A/G) is Associated With Increased Risk of Premenopausal Breast Cancer in South Indian Women.

    Vinod, Cingeetham / Jyothy, Akka / Vijay Kumar, Malladi / Raman, Ramaiyer Raghu / Nallari, Pratibha / Venkateshwari, Ananthapur

    Iranian journal of cancer prevention

    2015  Volume 8, Issue 4, Page(s) e3434

    Abstract: Background: Evading the immune destruction and angiogenesis has been the two hallmarks of cancer. Interleukin-10 (IL-10) is a cytokine with immune suppressing (pro-tumorigenic) and anti-angiogenic (anti-tumorigenic) properties, thus making the role of ... ...

    Abstract Background: Evading the immune destruction and angiogenesis has been the two hallmarks of cancer. Interleukin-10 (IL-10) is a cytokine with immune suppressing (pro-tumorigenic) and anti-angiogenic (anti-tumorigenic) properties, thus making the role of IL-10 in tumorigenesis enigmatic. Previous studies have suggested a critical role of IL10 altered expression in complex process of tumor-microenvironment, co-evolution and tumorigenesis.
    Objectives: Evaluating the role of IL10 (-1082A/G) gene promoter polymorphism in breast cancer patients from South India.
    Patients and methods: A case-control study was conducted with a total of 285 individuals, these include 125 histologically confirmed breast cancer patients and 160 age and sex matched controls. Genotypes were determined by allele-specific polymerase chain reaction (AS-PCR), followed by agarose gel electrophoresis. Statistical analysis was done to test the significance of results obtained.
    Results: Statistical analysis revealed that AA genotype of the Il-10 -1082A/G polymorphism is significantly associated with breast cancer (AA vs. AG: χ(2) = 14.46, P = 0.0001432, OR = 2.854, 95% CI = 1.68 - 4.849). Up on stratifying subjects based on cancer stage, age at onset, menopausal status, AA genotype has associated with all the sub groups, except for post-menopausal women. There was no significant association which was observed with respected to hormonal status (ER, PR) and Her2/neu status.
    Conclusions: The present study suggests that IL-10 AA genotype as a risk factor in the etiology of breast cancer in the South Indian population.
    Language English
    Publishing date 2015-08-24
    Publishing country Iran
    Document type Journal Article
    ZDB-ID 2577885-7
    ISSN 2008-2401 ; 2008-2398
    ISSN (online) 2008-2401
    ISSN 2008-2398
    DOI 10.17795/ijcp-3434
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Role of IL-10 -819(t/c) promoter polymorphism in preeclampsia.

    Sowmya, Sabnavis / Ramaiah, Aruna / Sunitha, Tella / Nallari, Pratibha / Jyothy, Akka / Venkateshwari, Ananthapur

    Inflammation

    2014  Volume 37, Issue 4, Page(s) 1022–1027

    Abstract: Preeclampsia is a severe complication of pregnancy characterized by an excessive maternal systemic inflammatory response with activation of both the innate and adaptive immune system. Interleukin-10 affects maternal intravascular inflammation, as well as ...

    Abstract Preeclampsia is a severe complication of pregnancy characterized by an excessive maternal systemic inflammatory response with activation of both the innate and adaptive immune system. Interleukin-10 affects maternal intravascular inflammation, as well as endothelial dysfunction. The aim of the study was to investigate the association between IL-10 T-819 C polymorphism and preeclampsia. A total of 120 pregnant women with preeclampsia and 120 women with normal pregnancy attending the Gynecological Unit of Government Maternity Hospital, Petlaburz, Hyderabad, India, were considered for the present study. A standard amplification refractory mutation system (ARMS) PCR was carried out for genotyping of IL-10 T-819 C promoter polymorphism in all the participants. Genotypic distribution of the control and patient groups was compared with values predicted by the Hardy-Weinberg equilibrium using χ2 test. Odds ratios (OR) and their respective 95 % confidence intervals were used to measure the strength of association between IL-10 gene polymorphism and preeclampsia. The frequencies of IL-10 T-819 C genotypes, CC, CT, and TT, were 47.5, 28.3, and 24.2 % in women with preeclampsia and 20.8, 48.3, and 30.8 % in the controls, respectively. There is a significant difference in the distribution of genotypes and alleles of IL-10 T-819 C between the two groups (test power = 0.66). The present study suggests that the IL-10 T-819 C gene promoter polymorphism can be a major genetic regulator in the etiology of preeclampsia.
    MeSH term(s) Adult ; Alleles ; Blood Pressure ; Case-Control Studies ; Female ; Gene Frequency ; Genes, Dominant ; Genes, Recessive ; Genotype ; Humans ; Interleukin-10/blood ; Interleukin-10/genetics ; Polymorphism, Genetic ; Pre-Eclampsia/blood ; Pre-Eclampsia/genetics ; Pregnancy ; Promoter Regions, Genetic
    Chemical Substances IL10 protein, human ; Interleukin-10 (130068-27-8)
    Language English
    Publishing date 2014-01-30
    Publishing country United States
    Document type Journal Article
    ZDB-ID 434408-x
    ISSN 1573-2576 ; 0360-3997
    ISSN (online) 1573-2576
    ISSN 0360-3997
    DOI 10.1007/s10753-014-9824-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Role of interstitial collagenase gene promoter polymorphism in the etiology of gastric cancer

    Krishnaveni Devulapalli / Amar Chand Bhayal / Shravan Kumar Porike / Ramanna Macherla / Jyothy Akka / Pratibha Nallari / Venkateshwari Ananthapur

    Saudi Journal of Gastroenterology, Vol 20, Iss 5, Pp 309-

    2014  Volume 314

    Abstract: Background/Aims: Gastric cancer (GC) is a multifactorial disorder mediated by genetic, epigenetic, and environmental risk factors. GC is the most common cancer in India and it is the third prominent cause of cancer death worldwide. A single nucleotide ... ...

    Abstract Background/Aims: Gastric cancer (GC) is a multifactorial disorder mediated by genetic, epigenetic, and environmental risk factors. GC is the most common cancer in India and it is the third prominent cause of cancer death worldwide. A single nucleotide polymorphism (SNP) in the promoter region of interstitial collagenase (MMP-1) gene appears to have an impact on the transcriptional activity and regulation of its expression. Hence, the present study is aimed to evaluate the role of interstitial collagenase gene-1607 1G/2G (rs1799750) promoter polymorphism in the etiology of GC. Patients and Methods: The study included 166 GC patients and 202 control subjects. Genomic DNA was isolated from whole blood samples of the subjects, and the genotyping of interstitial collagenase promoter polymorphism was carried out by polymerase chain reaction-restriction fragment length polymorphism method followed by agarose gel electrophoresis. Appropriate statistical methods were applied to test the significance of the results. Results: The risk factor profile of the patients revealed that male gender, age above 50 years, addiction to alcohol and smoking were the most common risk factors (P < 0.05). There was a significant difference in the distribution of 2G/2G genotype (2G/2G vs. 1G/1G, P = 0.016) and 1G/2G genotype (2G/2G + 1G/2G vs. 1G/1G, P = 0.010) in patient group compared with that of the control subjects. Conclusion: The present study provides indirect evidence for the role of interstitial collagenase gene 1G/2G promoter polymorphism in the etiology of GC in South Indian population.
    Keywords Gastric cancer ; genotype ; interstitial collagenase ; Matrix metalloproteinases-1 ; polymorphism ; polymerase chain reaction-restriction fragment length polymorphism ; Diseases of the digestive system. Gastroenterology ; RC799-869 ; Specialties of internal medicine ; RC581-951 ; Internal medicine ; RC31-1245 ; Medicine ; R
    Subject code 610
    Language English
    Publishing date 2014-01-01T00:00:00Z
    Publisher Medknow Publications
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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