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Article ; Online: Brinzolamide- and latanoprost-loaded nano lipid carrier prevents synergistic retinal damage in glaucoma.

Chen, Liping / Wu, Ruixin

2022 Volume 69, Issue 2, Page(s) 423–428

Abstract: Glaucoma is a common eye disease and a major cause of blindness. We designed brinzolamide (Brla)- and latanoprost (Ltp)-loaded nano-lipoidal carriers (NLCs) for glaucoma treatment. Brla and Ltp-loaded NLCs were designed and characterized by assessing the ...

Abstract	Glaucoma is a common eye disease and a major cause of blindness. We designed brinzolamide (Brla)- and latanoprost (Ltp)-loaded nano-lipoidal carriers (NLCs) for glaucoma treatment. Brla and Ltp-loaded NLCs were designed and characterized by assessing the zeta potential, polydispersity index, X-ray diffraction and scanning electron microscopy images, and particle size. Drug release was assessed by in vitro and ex vivo methods to determine transcorneal permeation, ocular irritation, and cell viability. Moreover, Brla- and Ltp-loaded NLCs were assessed in terms of the management of raised intraocular pressure (IOP). The size of Brla- and Ltp-loaded NLCs was <200 nm, the drug entrapment efficiency was 97.5%, and the zeta potential was 35.33 mv. The transcorneal permeation levels of Blra and Ltp after 8 h were 50.5% and 49.4%, respectively; after 24 h, they were 81.4% and 84.2%, respectively. However, NLCs are not cytotoxic. Moreover, Brla+Ltp-treated NLCs effectively reduced IOP in glaucoma patients. Therefore, Brla+Ltp-loaded NLCs showed promising effects against glaucoma.
MeSH term(s)	Drug Carriers ; Glaucoma/drug therapy ; Humans ; Latanoprost/therapeutic use ; Lipids ; Nanostructures ; Sulfonamides ; Thiazines
Chemical Substances	Drug Carriers ; Lipids ; Sulfonamides ; Thiazines ; Latanoprost (6Z5B6HVF6O) ; brinzolamide (9451Z89515)
Language	English
Publishing date	2022-05-26
Publishing country	Poland
Document type	Journal Article
ZDB-ID	595762-x
ISSN	1734-154X ; 0001-527X
ISSN (online)	1734-154X
ISSN	0001-527X
DOI	10.18388/abp.2020_5885
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Article: Dynamic Survival Risk Prognostic Model and Genomic Landscape for Atypical Teratoid/Rhabdoid Tumors: A Population-Based, Real-World Study.

Chen, Sihao / He, Yi / Liu, Jiao / Wu, Ruixin / Wang, Menglei / Jin, Aishun

Cancers

2024 Volume 16, Issue 5

Abstract: Background: An atypical teratoid/rhabdoid tumor (AT/RT) is an uncommon and aggressive pediatric central nervous system neoplasm. However, a universal clinical consensus or reliable prognostic evaluation system for this malignancy is lacking. Our study ... ...

Abstract	Background: An atypical teratoid/rhabdoid tumor (AT/RT) is an uncommon and aggressive pediatric central nervous system neoplasm. However, a universal clinical consensus or reliable prognostic evaluation system for this malignancy is lacking. Our study aimed to develop a risk model based on comprehensive clinical data to assist in clinical decision-making. Methods: We conducted a retrospective study by examining data from the Surveillance, Epidemiology, and End Results (SEER) repository, spanning 2000 to 2019. The external validation cohort was sourced from the Children's Hospital Affiliated to Chongqing Medical University, China. To discern independent factors affecting overall survival (OS) and cancer-specific survival (CSS), we applied Least Absolute Shrinkage and Selection Operator (LASSO) and Random Forest (RF) regression analyses. Based on these factors, we structured nomogram survival predictions and initiated a dynamic online risk-evaluation system. To contrast survival outcomes among diverse treatments, we used propensity score matching (PSM) methodology. Molecular data with the most common mutations in AT/RT were extracted from the Catalogue of Somatic Mutations in Cancer (COSMIC) database. Results: The annual incidence of AT/RT showed an increasing trend (APC, 2.86%; 95% CI:0.75-5.01). Our prognostic study included 316 SEER database participants and 27 external validation patients. The entire group had a median OS of 18 months (range 11.5 to 24 months) and median CSS of 21 months (range 11.7 to 29.2). Evaluations involving C-statistics, DCA, and ROC analysis underscored the distinctive capabilities of our prediction model. An analysis via PSM highlighted that individuals undergoing triple therapy (integrating surgery, radiotherapy, and chemotherapy) had discernibly enhanced OS and CSS. The most common mutations of AT/RT identified in the COSMIC database were SMARCB1, BRAF, SMARCA4, NF2, and NRAS. Conclusions: In this study, we devised a predictive model that effectively gauges the prognosis of AT/RT and briefly analyzed its genomic features, which might offer a valuable tool to address existing clinical challenges.
Language	English
Publishing date	2024-03-05
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2527080-1
ISSN	2072-6694
ISSN	2072-6694
DOI	10.3390/cancers16051059
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Article: Non-Impacted Third Molars: Angels or Devils?

Wu, Rui-Xin / Tian, Bei-Min / Gao, Rui / Chen, Fa-Ming

Journal of clinical medicine

2023 Volume 12, Issue 13

Abstract: Third molars, also known as wisdom teeth, are located in the most posterior of the tooth arch [ ... ]. ...

Abstract	Third molars, also known as wisdom teeth, are located in the most posterior of the tooth arch [...].
Language	English
Publishing date	2023-07-03
Publishing country	Switzerland
Document type	Editorial
ZDB-ID	2662592-1
ISSN	2077-0383
ISSN	2077-0383
DOI	10.3390/jcm12134455
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Article ; Online: Refractory dissolved organic matter as carbon source for advanced nitrogen removal from mature landfill leachate: A review and prospective application

Wu, Ruixin / Li, Yu-You / Liu, Jianyong

Journal of Cleaner Production. 2022 Dec., v. 380 p.134962-

2022

Abstract: Partial nitrification-anammox is a promising process in mature landfill leachate treatment, but there is 11% residue nitrate to be removed. Denitrification or partial denitrification process can be used to remove the nitrate in the presence of carbon ... ...

Abstract	Partial nitrification-anammox is a promising process in mature landfill leachate treatment, but there is 11% residue nitrate to be removed. Denitrification or partial denitrification process can be used to remove the nitrate in the presence of carbon source to achieve advanced nitrogen removal. However, there is a lack of biodegradable organic matter in mature landfill leachate which can be used as carbon source for denitrification. Fortunately, refractory dissolved organic matter has been exploited to be used as a potential carbon source for denitrification in recent years, which is expected to achieve advanced nitrogen removal in mature landfill leachate treatment. Bacteria such as Chloroflexi can biodegrade refractory dissolved organic matter in mature landfill leachate as readily biodegradable organic matter by sludge adsorption-degradation mechanism, which can promote advanced nitrogen removal in anammox-based process. Furthermore, in order to improve the refractory dissolved organic matter utilization efficiency, several methods to improve the biodegradability of refractory dissolved organic matter are summarized, which include extended hydraulic retention time, prolonged sludge retention time, bioaugmentation and advanced oxidation processes. A novel integrated anammox-based process is proposed for mature landfill leachate treatment, in which ozonated nanofiltration concentrate is recirculated to provide carbon source for advanced nitrogen removal. Compared with conventional treatment process, this proposed process has the advantage of both economical- and environmental-effective in mature landfill leachate treatment.
Keywords	Chloroflexi ; bioaugmentation ; biodegradability ; carbon ; denitrification ; dissolved organic matter ; landfill leachates ; nanofiltration ; nitrates ; nitrogen ; oxidation ; ozonation ; sludge ; Mature landfill leachate ; Anammox ; Refractory dissolved organic matter ; Carbon source
Language	English
Dates of publication	2022-12
Publishing place	Elsevier Ltd
Document type	Article ; Online
ISSN	0959-6526
DOI	10.1016/j.jclepro.2022.134962
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Therapeutic targeting m6A-guided miR-146a-5p signaling contributes to the melittin-induced selective suppression of bladder cancer.

Yan, Rucheng / Dai, Weiwei / Wu, Ruixin / Huang, Houbao / Shu, Minfeng

Cancer letters

2022 Volume 534, Page(s) 215615

Abstract: Abnormal RNA methylation and dysregulation of miRNA are frequently occurred in bladder cancer. Melittin is a potential drug candidate for intravesical chemotherapy against bladder cancer. However, the underlying epigenetic mechanism by which melittin- ... ...

Abstract	Abnormal RNA methylation and dysregulation of miRNA are frequently occurred in bladder cancer. Melittin is a potential drug candidate for intravesical chemotherapy against bladder cancer. However, the underlying epigenetic mechanism by which melittin-induced anti-tumor effect remains unclear. Here, we showed that melittin selectively induced apoptosis of bladder cancer cells in a METTL3-dependent manner. Ectopic expression of METTL3 significantly blocked melittin-induced apoptosis in vitro and in vivo. MicroRNA-sequence analysis identified miR-146a-5p suppression contributed to the melittin-induced selective antitumor effect. Further investigation revealed that METTL3-guided m6A modification methylated pri-miR-146 at the flanking sequence, which was responsible for the pri-miR-146 maturation. Moreover, NUMB/NOTCH2 axis was identified as a downstream target signal that mediated the pro-survival role of miR-146a-5p in bladder cancer cells. Importantly, METTL3 and miR-146a-5p were positively correlated with recurrence and poor prognosis of patients with bladder cancer. Our study indicates that METTL3 acts as a fate determinant that controls the sensitivity of bladder cancer cells to melittin treatment. Moreover, METTL3/miR-146a-5p/NUMB/NOTCH2 axis plays an oncogenic role in bladder cancer pathogenesis and could be a potential therapeutic target for recurrent bladder cancer treatment.
MeSH term(s)	Gene Expression Regulation, Neoplastic ; Humans ; Melitten/pharmacology ; Methyltransferases/metabolism ; MicroRNAs/genetics ; MicroRNAs/metabolism ; Neoplasm Recurrence, Local/genetics ; Urinary Bladder Neoplasms/drug therapy ; Urinary Bladder Neoplasms/genetics ; Urinary Bladder Neoplasms/pathology
Chemical Substances	MIRN146 microRNA, human ; MicroRNAs ; Melitten (20449-79-0) ; Methyltransferases (EC 2.1.1.-) ; METTL3 protein, human (EC 2.1.1.62)
Language	English
Publishing date	2022-03-09
Publishing country	Ireland
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	195674-7
ISSN	1872-7980 ; 0304-3835
ISSN (online)	1872-7980
ISSN	0304-3835
DOI	10.1016/j.canlet.2022.215615
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Article: Constructing an APOBEC-related gene signature with predictive value in the overall survival and therapeutic sensitivity in lung adenocarcinoma.

Luo, Yu / Wang, Huiru / Zhong, Jian / Shi, Jianrong / Zhang, Xianlin / Yang, Yanni / Wu, Ruixin

Heliyon

2023 Volume 9, Issue 11, Page(s) e21336

Abstract: Background: APOBEC family play an important role in cancer mutagenesis and tumor development. The role of APOBEC family in lung adenocarcinoma (LUAD) has not been studied comprehensively.: Materials and methods: The expression data of pan-cancer as ... ...

Abstract	Background: APOBEC family play an important role in cancer mutagenesis and tumor development. The role of APOBEC family in lung adenocarcinoma (LUAD) has not been studied comprehensively. Materials and methods: The expression data of pan-cancer as well as LUAD was obtained from public databases. The expression level of APOBEC family genes was analyzed in different normal and cancer tissues. APOBEC mutagenesis enrichment score (AMES) was utilized to evaluate the APOBEC-induced mutations and the relation of APOBEC with genomic instability. Gene set enrichment analysis was used to identify differentially enriched pathways. Univariate Cox regression and Lasso regression were applied to screen key prognostic genes. The immune cell infiltration was estimated by CIBERSORT. RT-qPCR assay, CCK-8 and Transwell assay were conducted to explore gene expression and lung cancer cell invasion. Results: Cancer tissues had significantly altered expression of APOBEC family genes and the expression patterns of APOBEC family were different in different cancer types. APOBEC3B was the most aberrantly expressed in most cancer types. In LUAD, we observed a significantly positive correlation of AMES with intratumor heterogeneity (ITH), tumor neoantigen burden (TNB), and tumor mutation burden (TMB). High AMES group had high mutation counts of DNA damage repair pathways, and high enrichment of cell cycle and DNA repair pathways. We identified four prognostic genes (LYPD3, ANLN, MUC5B, and FOSL1) based on AMES, and constructed an AMES-related gene signature. The expressions of four genes were enhanced and accelerated the invasion ability and viability of lung cancer cells. Furthermore, we found that high group increased oxidative stress level. Conclusions: APOBEC family was associated with genomic instability, DNA damage-related pathways, and cell cycle in LUAD. The AMES-related gene signature had a great potential to indicate the prognosis and guide immunotherapy/chemotherapy for patients suffering from LUAD.
Language	English
Publishing date	2023-10-28
Publishing country	England
Document type	Journal Article
ZDB-ID	2835763-2
ISSN	2405-8440
ISSN	2405-8440
DOI	10.1016/j.heliyon.2023.e21336
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Article ; Online: High expression of VTA1 is an adverse prognostic factor in lung adenocarcinoma.

Sun, Xingang / Wu, Ruixin / Guan, Xinjun / Dong, Changsheng / Qiu, Dongze / Xia, Guojie / Feng, Shouhan / Duan, Jinlong / Zhang, Lei

Cellular and molecular biology (Noisy-le-Grand, France)

2024 Volume 70, Issue 1, Page(s) 46–55

Abstract: Lung adenocarcinoma (LUAD) is a common pathological type of non-small cell lung cancer; identifying preferable biomarkers has become one of the current challenges. Given that VTA1 has been reported associated with tumor progression in various human solid ...

Abstract	Lung adenocarcinoma (LUAD) is a common pathological type of non-small cell lung cancer; identifying preferable biomarkers has become one of the current challenges. Given that VTA1 has been reported associated with tumor progression in various human solid cancers but rarely reported in LUAD, herein, RNA sequencing data from TCGA and GTEx were obtained for analysis of VTA1 expression and differentially expressed gene (DEG). Furthermore, functional enrichment analysis of VTA1-related DEGs was performed by GO/KEGG, GSEA, immune cell infiltration analysis, and protein-protein interaction (PPI) network. In addition, the clinical significance of VTA1 in LUAD was figured out by Kaplan-Meier Cox regression and prognostic nomogram model. R package was used to analyze incorporated studies. As a result, VTA1 was highly expressed in various malignancies, including LUAD, compared with normal samples. Moreover, high expression of VTA1 was associated with poor prognosis in 533 LUAD samples, as well as T stage T2&T3&T4, N stage N1&N2&N3, M stage M1, pathologic stage II&III&IV, and residual tumor R1&R2, et al. (P < 0.05). High VTA1 was an independent prognostic factor in Cox regression analysis; Age and cytogenetics risk were included in the nomogram prognostic model. Furthermore, a total of 4232 DEGs were identified between the high- and the low-expression group, of which 736 genes were up-regulated and 3496 genes were down-regulated. Collectively, high expression of VTA1 is a potential biomarker for adverse outcomes in LUAD. The DEGs and pathways recognized in the study provide a preliminary grasp of the underlying molecular mechanisms of LUAD carcinogenesis and progression.
MeSH term(s)	Humans ; Adenocarcinoma of Lung/genetics ; Carcinogenesis ; Carcinoma, Non-Small-Cell Lung ; Lung Neoplasms/diagnosis ; Lung Neoplasms/genetics ; Prognosis ; Endosomal Sorting Complexes Required for Transport/genetics
Chemical Substances	VTA1 protein, human ; Endosomal Sorting Complexes Required for Transport
Language	English
Publishing date	2024-01-31
Publishing country	France
Document type	Journal Article
ZDB-ID	1161779-2
ISSN	1165-158X ; 0145-5680
ISSN (online)	1165-158X
ISSN	0145-5680
DOI	10.14715/cmb/2024.70.1.7
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Article ; Online: Exploiting refractory organic matter for advanced nitrogen removal from mature landfill leachate via anammox in an expanded granular sludge bed reactor.

Jiang, Mengting / Ji, Shenghao / Wu, Ruixin / Yang, Huan / Li, Yu-You / Liu, Jianyong

Bioresource technology

2023 Volume 371, Page(s) 128594

Abstract: Anammox is an efficient low-carbon nitrogen removal technology for mature landfill leachate (MLL). However, it produces 11 % nitrate theoretically, which needs further removal. In this study, the mechanisms of exploiting refractory organic matter (ROM) ... ...

Abstract	Anammox is an efficient low-carbon nitrogen removal technology for mature landfill leachate (MLL). However, it produces 11 % nitrate theoretically, which needs further removal. In this study, the mechanisms of exploiting refractory organic matter (ROM) from an MLL as an inner carbon source for advanced nitrogen removal via anammox were systematically analyzed, and the effects of hydraulic retention time on nitrogen and ROM removal/utilization were investigated. Without any external carbon source, a total nitrogen and organic carbon removal efficiency of 94.50 % and 27.12 %, respectively, were achieved, with a nitrogen loading rate of 2.4 kg N/(m
MeSH term(s)	Denitrification ; Water Pollutants, Chemical ; Sewage ; Nitrogen ; Anaerobic Ammonia Oxidation ; Bioreactors ; Oxidation-Reduction
Chemical Substances	Water Pollutants, Chemical ; Sewage ; Nitrogen (N762921K75)
Language	English
Publishing date	2023-01-09
Publishing country	England
Document type	Journal Article
ZDB-ID	1065195-0
ISSN	1873-2976 ; 0960-8524
ISSN (online)	1873-2976
ISSN	0960-8524
DOI	10.1016/j.biortech.2023.128594
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Article ; Online: Influence of Cuticular Waxes from Triticale on Rumen Fermentation: A Metabolomic and Microbiome Profiling Study.

Huang, Jiahao / Xu, Jiawei / Wu, Ruixin / Wang, Jinjing / Yang, Jianfeng / Li, Yuan / Wang, Bo / Xiong, Wangdan / Guo, Yanjun

Journal of agricultural and food chemistry

2024 Volume 72, Issue 3, Page(s) 1592–1606

Abstract: Cuticular wax, a critical defense layer for plants, remains a relatively unexplored factor in rumen fermentation. We investigated the impact of cuticular wax on rumen fermentation using triticale as a model. In total, six wax classes were identified, ... ...

Abstract	Cuticular wax, a critical defense layer for plants, remains a relatively unexplored factor in rumen fermentation. We investigated the impact of cuticular wax on rumen fermentation using triticale as a model. In total, six wax classes were identified, including fatty acids, aldehydes, alkane, primary alcohol, alkyresorcinol, and β-diketone, with low-bloom lines predominated by 46.05% of primary alcohols and high-bloom lines by 35.64% of β-diketone. Low-wax addition (2.5 g/kg DM) increased the gas production by 19.25% (
MeSH term(s)	Animals ; Rumen/metabolism ; Triticale/metabolism ; Fermentation ; Waxes/metabolism ; Microbiota ; Animal Feed/analysis
Chemical Substances	Waxes
Language	English
Publishing date	2024-01-10
Publishing country	United States
Document type	Journal Article
ZDB-ID	241619-0
ISSN	1520-5118 ; 0021-8561
ISSN (online)	1520-5118
ISSN	0021-8561
DOI	10.1021/acs.jafc.3c07416
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Article ; Online: Increasing the organic loading rate of household food waste anaerobic digestion by landfill leachate addition: Performance and mechanism

Zou, Lianpei / Wang, Yi / Wu, Ruixin / Ji, Shenghao / Wan, Yulan / Cheng, Hui / Li, Yu-You / Liu, Jianyong

Journal of Environmental Management. 2023 Sept., v. 342 p.118170-

2023

Abstract: A high amount of easily degradable organics and the absence of trace metals (TMs) in household food waste (HFW) lowered the stability and efficiency of anaerobic digestion (AD) of HFW. Leachate addition to the AD of HFW can provide ammonia nitrogen and ... ...

Abstract	A high amount of easily degradable organics and the absence of trace metals (TMs) in household food waste (HFW) lowered the stability and efficiency of anaerobic digestion (AD) of HFW. Leachate addition to the AD of HFW can provide ammonia nitrogen and TMs to address the accumulation of volatile fatty acids and the lack of TMs. To study the effect of leachate addition on increasing organic loading rate (OLR), both mono-digestion of HFW and AD of HFW with leachate addition were evaluated using two continuously stirred tank reactors. The OLR of the mono-digestion reactor only reached 2.5 g COD/L/d. However, with the addition of ammonia nitrogen and TMs, the OLR of the failed mono-digestion reactor increased by 2 and 3.5 g COD/L/d, respectively. The specific methanogenic activity increased by 94.4% and the hydrolysis efficiency increased by 135%. Finally, the OLR of mono-digestion of HFW reached 8 g COD/L/d, with a hydraulic retention time (HRT) of 8 days and methane production rate of 2.4 L/L/d. In the leachate addition reactor, the OLR reached 15 g COD/L/d, while the HRT and methane production were 7 days and 3.4 L/L/d, respectively. This study demonstrates that leachate addition substantially improves the AD efficiency of HFW. The two main mechanisms of increasing the OLR of an AD reactor are the buffer capacity of ammonia nitrogen and the stimulation of methanogen by TMs from leachate.
Keywords	ammonium nitrogen ; anaerobic digestion ; buffering capacity ; environmental management ; food waste ; hydrolysis ; landfill leachates ; methane production ; methanogens ; Household food waste ; Leachate addition ; Organic loading rate ; Ammonia nitrogen ; Trace metals
Language	English
Dates of publication	2023-09
Publishing place	Elsevier Ltd
Document type	Article ; Online
ZDB-ID	184882-3
ISSN	1095-8630 ; 0301-4797
ISSN (online)	1095-8630
ISSN	0301-4797
DOI	10.1016/j.jenvman.2023.118170
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