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Article ; Online: Biomaterials science and surface engineering strategies for dental peri-implantitis management.

Yu, Ya-Meng / Lu, Yu-Pu / Zhang, Ting / Zheng, Yu-Feng / Liu, Yun-Song / Xia, Dan-Dan

2024 Volume 11, Issue 1, Page(s) 29

Abstract: Peri-implantitis is a bacterial infection that causes soft tissue inflammatory lesions and alveolar bone resorption, ultimately resulting in implant failure. Dental implants for clinical use barely have antibacterial properties, and bacterial ... ...

Abstract	Peri-implantitis is a bacterial infection that causes soft tissue inflammatory lesions and alveolar bone resorption, ultimately resulting in implant failure. Dental implants for clinical use barely have antibacterial properties, and bacterial colonization and biofilm formation on the dental implants are major causes of peri-implantitis. Treatment strategies such as mechanical debridement and antibiotic therapy have been used to remove dental plaque. However, it is particularly important to prevent the occurrence of peri-implantitis rather than treatment. Therefore, the current research spot has focused on improving the antibacterial properties of dental implants, such as the construction of specific micro-nano surface texture, the introduction of diverse functional coatings, or the application of materials with intrinsic antibacterial properties. The aforementioned antibacterial surfaces can be incorporated with bioactive molecules, metallic nanoparticles, or other functional components to further enhance the osteogenic properties and accelerate the healing process. In this review, we summarize the recent developments in biomaterial science and the modification strategies applied to dental implants to inhibit biofilm formation and facilitate bone-implant integration. Furthermore, we summarized the obstacles existing in the process of laboratory research to reach the clinic products, and propose corresponding directions for future developments and research perspectives, so that to provide insights into the rational design and construction of dental implants with the aim to balance antibacterial efficacy, biological safety, and osteogenic property.
MeSH term(s)	Peri-Implantitis/therapy ; Peri-Implantitis/prevention & control ; Peri-Implantitis/drug therapy ; Humans ; Dental Implants/standards ; Biocompatible Materials/therapeutic use ; Biocompatible Materials/pharmacology ; Biofilms/drug effects ; Surface Properties ; Anti-Bacterial Agents/therapeutic use ; Anti-Bacterial Agents/pharmacology
Chemical Substances	Dental Implants ; Biocompatible Materials ; Anti-Bacterial Agents
Language	English
Publishing date	2024-05-13
Publishing country	England
Document type	Journal Article ; Review
ZDB-ID	2768940-2
ISSN	2054-9369 ; 2054-9369
ISSN (online)	2054-9369
ISSN	2054-9369
DOI	10.1186/s40779-024-00532-9
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Article ; Online: The antifeedant and antifungal cryptic metabolites isolated from tobacco endophytes induced by host medium and coculture.

Chen, Jing-Xin / Xia, Dan-Dan / Yang, Xue-Qiong / Yang, Ya-Bin / Ding, Zhong-Tao

Fitoterapia

2022 Volume 163, Page(s) 105335

Abstract: Four new cryptic metabolites including one fumagillol derivative (2), one cyclohexenone derivative (4), one 10-membered lactone (5), and one natural 4-epi-brefeldin C (8), along with seven known compounds were found from isogenesis endophytes Aspergillus ...

Abstract	Four new cryptic metabolites including one fumagillol derivative (2), one cyclohexenone derivative (4), one 10-membered lactone (5), and one natural 4-epi-brefeldin C (8), along with seven known compounds were found from isogenesis endophytes Aspergillus fumigatus, Penicillium janthinellum, Nigrospora sp., and Stagonosporopsis sp. induced by host Nicotiana tabacum medium and co-culture. The structures were determined mainly by spectroscopic methods, including extensive 1D, 2D NMR, MS techniques, ECD calculation, and Mosher's method. Compound 2 possessed a novel 1, 3-dioxetane residue and cyclohexane-containing terpenoid skeleton. Compounds 2, 4-7 and 10 showed significant antifungal activities against the plant pathogen Nigrospora sp. with MICs of 1 μg/mL. 2, 4, 5-7, and 10 indicated antifungal activities against Penicillium janthinellum, Aspergillus fumigatus, Phomopsis sp., and Alternaria sp. with MICs ≤8 μg/mL. Compounds 2, 6-8, and 10 (50 μg/cm
MeSH term(s)	Endophytes/chemistry ; Antifungal Agents/pharmacology ; Antifungal Agents/chemistry ; Nicotiana ; Coculture Techniques ; Molecular Structure ; Ascomycota ; Aspergillus fumigatus ; Microbial Sensitivity Tests
Chemical Substances	Antifungal Agents
Language	English
Publishing date	2022-10-20
Publishing country	Netherlands
Document type	Journal Article
ZDB-ID	412385-2
ISSN	1873-6971 ; 0367-326X
ISSN (online)	1873-6971
ISSN	0367-326X
DOI	10.1016/j.fitote.2022.105335
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Article ; Online: Two Decarestrictine Analogs from the Soil-Derived Fungus Penicillium sp. YUD18003 Associated with Gastrodia elata.

Xie, Fei / Xia, Dan-Dan / Duan, Hao-Jie / Sun, Yue / Zi, Zhi-Feng / Wan, Dai-Yu / Zhou, Hao / Ding, Zhong-Tao

Chemistry & biodiversity

2023 Volume 20, Issue 8, Page(s) e202300566

Abstract: Two new decarestrictine analogs decarestrictine P and penicitone, together with eight known homologous compounds were isolated from the soil fungus from the rhizosphere of Penicillium sp. YUD18003 related to Gastrodia elata. Their different structures ... ...

Abstract	Two new decarestrictine analogs decarestrictine P and penicitone, together with eight known homologous compounds were isolated from the soil fungus from the rhizosphere of Penicillium sp. YUD18003 related to Gastrodia elata. Their different structures include a decanolides decartestridine P and a long-chain polyhydroxyketone penicitone. The structures of new compounds were determined by nuclear magnetic resonance (NMR) spectroscopic analysis and high resolution electrospray ionization mass spectrometry (HR-ESI-MS), while their absolute configurations were determined by spectroscopic methods, DP4+ probability analysis, modified Snatzke's method and electron circular dichroism (ECD) calculations. All compounds were evaluated for antimicrobial activities.
MeSH term(s)	Penicillium/chemistry ; Gastrodia/chemistry ; Soil ; Magnetic Resonance Spectroscopy ; Fungi ; Molecular Structure
Chemical Substances	Soil
Language	English
Publishing date	2023-07-12
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2139001-0
ISSN	1612-1880 ; 1612-1872
ISSN (online)	1612-1880
ISSN	1612-1872
DOI	10.1002/cbdv.202300566
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Article ; Online: Fungal polyketides from a rhizospheric soil-derived Penicillium sp. YUD17004 associated with Gastrodia elata.

Li, Hong-Tao / Yang, Rui-Ning / Liu, Tao / Xie, Fei / Duan, Hao-Jie / Xia, Dan-Dan / Zhou, Hao / Ding, Zhong-Tao

Phytochemistry

2022 Volume 205, Page(s) 113475

Abstract: Five unprecedented polyketide metabolites were isolated and characterized from a rhizospheric soil-derived Penicillium sp. YUD17004. Their diverse structures included two indanone-type polyketides penicillyketides A and B, a phthalide-like polyketides ... ...

Abstract	Five unprecedented polyketide metabolites were isolated and characterized from a rhizospheric soil-derived Penicillium sp. YUD17004. Their diverse structures included two indanone-type polyketides penicillyketides A and B, a phthalide-like polyketides penicillyketide C, a symmetrical chromone dimer penicillyketide D, along with a pyrone derivative pyranlyketide, which were elucidated by spectroscopic data interpretation and quantum chemical electronic circular dichroism calculation. Notably, the structures of penicillyketides A and B feature a highly functionalized indanone ring nucleus, but differ from other indanone-containing polyketides by the alkyl substitution pattern. The structure of penicillyketide C comprises a furanone ring instead of the hydroxycyclopentenone ring characteristic for penicillyketides A and B, and represents an undescribed arrangement within C
MeSH term(s)	Polyketides/pharmacology ; Penicillium ; Gastrodia ; Soil
Chemical Substances	Polyketides ; Soil
Language	English
Publishing date	2022-10-18
Publishing country	England
Document type	Journal Article
ZDB-ID	208884-8
ISSN	1873-3700 ; 0031-9422
ISSN (online)	1873-3700
ISSN	0031-9422
DOI	10.1016/j.phytochem.2022.113475
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Article: Altereporenes A–E, five epoxy octa-hydronaphthalene polyketides produced by an endophytic fungus Alternaria sp. YUD20002

Xia, Dan-Dan / Duan, Hao-Jie / Xie, Fei / Xie, Tian-Peng / Zhang, Yan / Sun, Yue / Lu, Jian-Mei / Gao, Yu-Hong / Zhou, Hao / Ding, Zhong-Tao

RSC advances. 2022 Aug. 10, v. 12, no. 34

2022

Abstract: Five previously undescribed epoxy octa-hydronaphthalene polyketides, altereporenes A–E (1–5) were isolated from rice culture of the endophytic fungus Alternaria sp. YUD20002 derived from the tubers of Solanum tuberosum. Their structures were determined ... ...

Abstract	Five previously undescribed epoxy octa-hydronaphthalene polyketides, altereporenes A–E (1–5) were isolated from rice culture of the endophytic fungus Alternaria sp. YUD20002 derived from the tubers of Solanum tuberosum. Their structures were determined on the basis of comprehensive spectroscopic analyses, while the absolute configurations were elucidated by the comparison of experimental and calculated specific rotations. Meanwhile, the antimicrobial, cytotoxic, anti-inflammatory and acetylcholinesterase inhibitory activities of compounds 1–5 were also investigated.
Keywords	Alternaria ; Solanum tuberosum ; acetylcholinesterase ; cytotoxicity ; endophytes ; epoxides ; fungi ; polyketides ; rice ; spectroscopy
Language	English
Dates of publication	2022-0810
Size	p. 22295-22301.
Publishing place	The Royal Society of Chemistry
Document type	Article
ISSN	2046-2069
DOI	10.1039/d2ra03917f
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Article: Talarophilone, a ring-opened azaphilone from the endophytic fungus Talaromyces sp. YUD18002

Xie, Fei / Li, Hong-Tao / Chen, Jing-Yuan / Duan, Hao-Jie / Xia, Dan-Dan / Sun, Yue / Gao, Yu-Hong / Zhou, Hao / Ding, Zhong-Tao

Tetrahedron letters. 2022 June 22, v. 100

2022

Abstract: Talarophilone (1), a novel ring-opened azaphilone, along with two known analogues were obtained from the culture of the Gastrodia elata-derived endophytic fungus Talaromyces sp. YUD18002. The structure of the new compound was elucidated using ... ...

Abstract	Talarophilone (1), a novel ring-opened azaphilone, along with two known analogues were obtained from the culture of the Gastrodia elata-derived endophytic fungus Talaromyces sp. YUD18002. The structure of the new compound was elucidated using spectroscopic methods and its absolute configuration was confirmed by a single-crystal X-ray diffraction analysis and electronic circular dichroism (ECD) analysis aided by TDDFT-ECD calculations. Talarophilone represented the first ring-opened azaphilone featuring ester group at C-6′ functionality. A putative biosynthetic pathways for compounds 1–3 were proposed. The in vitro cytotoxic activities of the new compound were also investigated. 2022 Elsevier Ltd. All rights reserved.
Keywords	Talaromyces ; X-ray diffraction ; biosynthesis ; circular dichroism spectroscopy ; cytotoxicity ; endophytes ; fungi
Language	English
Dates of publication	2022-0622
Publishing place	Elsevier Ltd
Document type	Article
ZDB-ID	204287-3
ISSN	1873-3581 ; 0040-4039
ISSN (online)	1873-3581
ISSN	0040-4039
DOI	10.1016/j.tetlet.2022.153855
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Article: Zinniol analogues from the endophytic fungus Arcopilus sp. YUD20001 associated with Gastrodia elata

Duan, Hao-Jie / Xie, Fei / Xia, Dan-Dan / Xie, Tian-Peng / Zhang, Yan / Sun, Yue / Lu, Jian-Mei / Zhou, Hao / Ding, Zhong-Tao

Phytochemical Society of Europe Phytochemistry letters. 2022 Oct., v. 51

2022

Abstract: Three undescribed zinniol derivatives, arcopiniols A-C (1-3), together with three known compounds zinniol (4), 8-zinniol methyl ether (5), and maristachone B (6), were isolated from the endophytic fungus Arcopilus sp. YUD20001 associated with Gastrodia ... ...

Abstract	Three undescribed zinniol derivatives, arcopiniols A-C (1-3), together with three known compounds zinniol (4), 8-zinniol methyl ether (5), and maristachone B (6), were isolated from the endophytic fungus Arcopilus sp. YUD20001 associated with Gastrodia elata using various chromatographic separation techniques. Arcopiniol A (1) was a new compound, while the spectroscopic data of arcopiniols B-C (2-3) are reported here for the first time. Their structures were determined using spectroscopic methods and their absolute configurations were confirmed by performing TDDFT calculations. A putative biosynthetic pathway for all the compounds was proposed. The anti-inflammatory and cytotoxic activities of compounds 1-3 were investigated.
Keywords	Gastrodia elata ; biochemical pathways ; chromatography ; cytotoxicity ; endophytes ; fungi ; methyl ethers ; plant biochemistry ; spectral analysis ; spectroscopy
Language	English
Dates of publication	2022-10
Size	p. 140-144.
Publishing place	Elsevier Ltd
Document type	Article
ISSN	1874-3900
DOI	10.1016/j.phytol.2022.08.014
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Article: Phialocetones A-J, C12 lactones from the rhizospheric soil-derived fungus Phialocephala sp. YUD18001 associated with Gastrodia elata

Xie, Fei / Li, Hong-Tao / Wang, Meng / Chen, Jing-Yuan / Duan, Hao-Jie / Xia, Dan-Dan / Xie, Tian-Peng / Gao, Yu-Hong / Zhou, Hao / Ding, Zhong-Tao

Phytochemistry. 2022 Oct., v. 202

2022

Abstract: Ten undescribed C₁₂ polyketide phialocetones A-J, featuring twelve-, six- and five-membered lactone moieties, were isolated from a rhizospheric soil-derived Phialocephala sp. YUD18001 associated with Gastrodia elata. Their structures were established by ... ...

Abstract	Ten undescribed C₁₂ polyketide phialocetones A-J, featuring twelve-, six- and five-membered lactone moieties, were isolated from a rhizospheric soil-derived Phialocephala sp. YUD18001 associated with Gastrodia elata. Their structures were established by NMR spectroscopic analysis and HRMS, while their absolute configurations were determined by computational methods and chemical reactions. All isolated compounds were evaluated for their anti-inflammatory and cytotoxic activities. As a result, phialocetone D exhibited moderate effects against NO production in lipopolysaccharide (LPS)-induced RAW264.7 cells with an IC₅₀ value of 14.77 μM, while phialocetone E showed cytotoxicity against HL-60 and SW480 cell lines with IC₅₀ values of 19.04 and 10.22 μM, respectively.
Keywords	Gastrodia elata ; cytotoxicity ; fungi ; lactones ; lipopolysaccharides ; plant biochemistry ; polyketides ; spectral analysis
Language	English
Dates of publication	2022-10
Publishing place	Elsevier Ltd
Document type	Article
ZDB-ID	208884-8
ISSN	1873-3700 ; 0031-9422
ISSN (online)	1873-3700
ISSN	0031-9422
DOI	10.1016/j.phytochem.2022.113359
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Article ; Online: Elevated serum anti-Saccharomyces cerevisiae antibody accompanied by gut mycobiota dysbiosis as a biomarker of diagnosis in patients with de novo Parkinson disease.

Chen, Ying / Zhang, Li-Ying / Fang, Yi / Li, Chuan / Xia, Dan-Dan / Zhang, Gong / Wen, Yi / Zhang, Song-Zhao / Hu, Liu / Gu, Lu-Yan / Liu, Yi / Tian, Jun / Yan, Ya-Ping / Yin, Xin-Zhen / Tao, Zhi-Hua / Zhang, Bao-Rong / Pu, Jia-Li

European journal of neurology

2023 Volume 30, Issue 11, Page(s) 3462–3470

Abstract: Background and purpose: Intestinal inflammation and gut microbiota dysbiosis contribute to Parkinson disease (PD) pathogenesis, and growing evidence suggests associations between inflammatory bowel diseases (IBD) and PD. Considered as markers of chronic ...

Abstract	Background and purpose: Intestinal inflammation and gut microbiota dysbiosis contribute to Parkinson disease (PD) pathogenesis, and growing evidence suggests associations between inflammatory bowel diseases (IBD) and PD. Considered as markers of chronic gastrointestinal inflammation, elevated serum anti-Saccharomyces cerevisiae antibody (ASCA) levels, against certain gut fungal components, are related to IBD, but their effect on PD is yet to be investigated. Methods: Serum ASCA IgG and IgA levels were measured using an enzyme-linked immunosorbent assay, and the gut mycobiota communities were investigated using ITS2 sequencing and analyzed using the Qiime pipeline. Results: The study included 393 subjects (148 healthy controls [HCs], 140 with PD, and 105 with essential tremor [ET]). Both serum ASCA IgG and IgA levels were significantly higher in the PD group than in the ET and HC groups. Combining serum ASCA levels and the occurrence of constipation could discriminate patients with PD from controls (area under the curve [AUC] = 0.81, 95% confidence interval [CI] = 0.76-0.86) and from patients with ET (AUC = 0.85, 95% CI = 0.79-0.89). Furthermore, the composition of the gut fungal community differed between the PD and HC groups. The relative abundances of Saccharomyces cerevisiae, Aspergillus, Candida solani, Aspergillus flavus, ASV601_Fungi, ASV866_Fungi, and ASV755_Fungi were significantly higher in the PD group, and enriched Malassezia restricta was found in the HC group. Conclusions: Our study identified elevated serum ASCA levels and enriched gut Saccharomyces cerevisiae in de novo PD.
Language	English
Publishing date	2023-02-14
Publishing country	England
Document type	Journal Article
ZDB-ID	1280785-0
ISSN	1468-1331 ; 1351-5101 ; 1471-0552
ISSN (online)	1468-1331
ISSN	1351-5101 ; 1471-0552
DOI	10.1111/ene.15711
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Article ; Online: Altereporenes A-E, five epoxy octa-hydronaphthalene polyketides produced by an endophytic fungus

Xia, Dan-Dan / Duan, Hao-Jie / Xie, Fei / Xie, Tian-Peng / Zhang, Yan / Sun, Yue / Lu, Jian-Mei / Gao, Yu-Hong / Zhou, Hao / Ding, Zhong-Tao

RSC advances

2022 Volume 12, Issue 34, Page(s) 22295–22301

Abstract: Five previously undescribed epoxy octa-hydronaphthalene polyketides, altereporenes A-E (1-5) were isolated from rice culture of the endophytic ... ...

Abstract	Five previously undescribed epoxy octa-hydronaphthalene polyketides, altereporenes A-E (1-5) were isolated from rice culture of the endophytic fungus
Language	English
Publishing date	2022-08-10
Publishing country	England
Document type	Journal Article
ISSN	2046-2069
ISSN (online)	2046-2069
DOI	10.1039/d2ra03917f
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