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  1. Book ; Conference proceedings: Biomedical and Computational Biology

    Yang, Cihui / Wen, Shiping

    Second International Symposium, BECB 2022, Virtual Event, August 13¿15, 2022, Revised Selected Papers

    (Lecture Notes in Bioinformatics)

    2023  

    Series title Lecture Notes in Bioinformatics
    Keywords artificial intelligence ; computer networks ; Computer Science ; Computer Systems ; Correlation Analysis ; Data Mining ; databases ; education ; Engineering ; Internet ; Learning ; Logistic Regression ; Logistics ; Machine Learning ; mathematics ; network protocols ; Signal Processing ; Telecommunication networks ; telecommunication systems ; university ; computer science ; computer systems ; correlation analysis ; data mining ; engineering ; internet ; learning ; logistic regression ; logistics ; machine learning ; signal processing ; telecommunication networks
    Language English
    Size 628 p.
    Edition 1
    Publisher Springer International Publishing
    Document type Book ; Conference proceedings
    Note PDA Manuell_19
    Format 155 x 235 x 34
    ISBN 9783031251900 ; 3031251903
    Database PDA

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  2. Book ; Thesis: Function and evolution of BMI1C in the Brassicaceae (mustard family)

    Yang, Chao

    2018  

    Author's details presented by M.Sc. Chao Yang
    Language English
    Size 140 Seiten, Illustrationen, Diagramme
    Publishing place Heidelberg
    Publishing country Germany
    Document type Book ; Thesis
    Thesis / German Habilitation thesis Dissertation, Ruperto Carola University Heidelberg, 2018
    HBZ-ID HT019805390
    Database Catalogue ZB MED Medicine, Health

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  3. Book ; Thesis: Postoperativer Verlauf von angiogenetischen Zytokinen nach Pankreasresektion bei Pankreasadenokarzinom

    Yang, Cui

    2017  

    Author's details vorgelegt von Cui Yang
    Subject code 610
    Language German
    Size II, 77 Blätter, Illustrationen, 30 cm
    Publishing place Heidelberg
    Publishing country Germany
    Document type Book ; Thesis
    Thesis / German Habilitation thesis Dissertation, Ruprecht-Karls-Universität Heidelberg, 2017
    HBZ-ID HT019389610
    Database Catalogue ZB MED Medicine, Health

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  4. Article: First Report of

    Yang, Chunxi

    Plant disease

    2024  

    Abstract: Pepino (Solanum muricatum L.) is a popular solanaceous crop that is native to South America and is commercially grown in many countries including China for its attractive, sweet and flavorful fruits. In September 2023, a postharvest fruit rot was ... ...

    Abstract Pepino (Solanum muricatum L.) is a popular solanaceous crop that is native to South America and is commercially grown in many countries including China for its attractive, sweet and flavorful fruits. In September 2023, a postharvest fruit rot was observed at an incidence of 7% to 10% on pepino at supermarket in Nanchang, Jiangxi, China (28.69°N, 115.81°E). Symptoms on fruits initially appeared as small black spots that later enlarged and became necrotic. To isolate the pathogen, symptomatic tissues were surface-sterilized using 75% ethanol for 15 s, then 1% sodium hypochlorite for 30 s, rinsed three times in sterile water, air dried, finally placed on potato dextrose agar (PDA) plates and incubated at 25℃ for 4 days. Ten strains (about 83% isolation frequency  from symptomatic pepino fruits) with similar morphological characteristics were isolated. The colonies on PDA were initially white, gradually turning gray and eventually becoming black, and had abundant aerial mycelia. Conidia were fusiform to linetype, dark brown, measuring 50 to 100 × 10 to 28 μm (n = 30) with 5 to 10 transverse septa and 0 to 3 longitudinal septa. Based on the morphological characteristics, the pathogen was identified as Alternaria sp. (Ma et al. 2021). To further confirm species, two representative isolates (JXAL-1 and JXAL-2) were selected for molecular identification. The internal transcribed spacer (ITS) region, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), elongation factor 1-alpha (TEF1), Alternaria major allergen gene (Alt a 1) and DNA-directed RNA polymerase II core subunit (RPB2) were amplified and sequenced by using primers ITS5/ITS4, gpd1/gpd2, Alt-for/Alt-rev, EF1-728F/EF1-986R and fRPB2-5F2/fRPB2-7cR (Woudenberg et al. 2013; Woudenberg et al. 2014), respectively. These sequences were deposited into GenBank with accession number PP231808-PP231809 (ITS), PP238480-PP238481 (GAPDH), PP238482-PP238483 (Alt a 1), PP238484-PP238485 (TEF1) and PP238486-PP238487 (RPB2). A BLASTn homology search for these nucleotides showed 100% identity to ITS (KJ718182, 525 nt/525 nt), GAPDH (KJ718026, 579 nt/579 nt), Alt a 1 (KJ718694, 472 nt/472 nt), TEF1 (KJ718530, 334 nt/334 nt) and RPB2 (KJ718355, 772 nt/772 nt) sequences of Alternaria linariae CBS 107.61. The maximum likelihood analyses were performed for the combined ITS, GAPDH, Alt a 1, TEF1 and RPB2 using the IQtree web server (Trifinopoulos et al. 2016). In the phylogenetic tree, the isolates and isolates of A. linariae clustered together with 100% bootstrap support. Therefore, the fungus was identified as A. linariae. To evaluate pathogenicity, five healthy fruits of pepino were surface-sterilized with 75% ethanol, then wounded and a 5 mm diameter agar with isolate JXAL-1 was put on the wound. Another five fruits was inoculated with sterile agar plugs as control. All treated fruits were incubated at 25 ℃ with 80% humidity , and repeated twice. Five days later, all the wounded fruits inoculated with A. linariae showed similar symptoms and A. linariae was reisolated, while the control fruits remained healthy and no pathogen was isolated, fulfilling Koch's postulates. A. linariae is known as an important pathogen causing early blight of tomato and potato(Adhikari et al. 2020). To our knowledge, this is the first report of A. linariae causing postharvest fruit rot on S. muricatum in China, which expands the natural host range of A. linariae and will be helpful to develop efficient management strategies on pepino.
    Language English
    Publishing date 2024-03-11
    Publishing country United States
    Document type Journal Article
    ZDB-ID 754182-x
    ISSN 0191-2917
    ISSN 0191-2917
    DOI 10.1094/PDIS-02-24-0390-PDN
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: First Report of

    Yang, Chunxi

    Plant disease

    2024  

    Abstract: Ziziphus mauritiana Lam., commonly known as Indian jujube or ber, is a popular fruit crops grown in tropical and sub-tropical regions of China. It is commonly stored at 4℃, relative humidity of about 90%, combined with waxing or sealing with film bag. In ...

    Abstract Ziziphus mauritiana Lam., commonly known as Indian jujube or ber, is a popular fruit crops grown in tropical and sub-tropical regions of China. It is commonly stored at 4℃, relative humidity of about 90%, combined with waxing or sealing with film bag. In January 2023, a postharvest fruit rot was observed on Indian jujube in three markets located in Nanchang city of Jiangxi province, China, with a disease incidence of 4 to 10%. Initially, brown spots appeared on the surface or base of the fruit, which gradually expanded into irregular brown lesions. Gray-white hyphae developed in the center of the lesions, and ultimately the fruit rotted. To isolate the pathogen, small pieces (5 × 5 mm) of ten infected fruits were surface-sterilized in 75% ethanol for 15 s and then 1% sodium hypochlorite for 30 s, rinsed three times in sterile water, plated onto potato dextrose agar (PDA), and incubated at 25°C for 3 days. Eight strains with similar morphological characteristics were isolated, and one representative isolate (JXAA-1) was used for morphological and molecular characterization. The colonies on PDA were initially olive green with white margins, and later turned dark olive or black with profuse sporulation. Conidia were borne singly or in a chain, brown, with 1 to 5 transverse septa and 0 to 3 longitudinal septa, obclavate to obpyriform, and measured 12.9 to 33.7 × 7.5 to 12.9 μm (n = 30). On the basis of morphological characteristics, the isolates were tentatively identified as Alternaria spp. (Simmons 2007). To confirm the identification, genomic DNA was extracted from the isolate JXAA-1 with the Fungi Genomic DNA Extraction Kit (Solarbio Biotech, China). The 18S nrDNA (SSU), 28S nrDNA (LSU), internal transcribed spacer of the rDNA (ITS), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), elongation factor 1-alpha (TEF1), Alternaria major allergen gene (Alt a 1), endopolygalacturonase (EndoPG) and an anonymous gene regions (OPA 10-2) were amplified and sequenced using primers NS1/NS4, LR7/LR0R, ITS5/ITS4, gpd1/gpd2, EF1-728F/EF1-986R, Alt-for/Alt-rev, PG3/PG2b, OPA10-2L/OPA10-2R, respectively (Woudenberg et al. 2015). The obtained DNA sequences (SSU: PP190241; LSU: PP190242; ITS: PP189927; GAPDH: PP196557; TEF1: PP196558; Alt a 1: PP196559; EndoPG: PP196560; and OPA 10-2: PP196561) showed 100% homology with those of A. alternata (GenBank accession nos. MT000349 [1020/1020 bp]; KP940477 [1312/1312 bp]; MK972909 [583/583 bp]; MN615421 [593/593 bp]; MN046379 [280/280 bp]; MN304714 [490/490 bp]; MN698284 [458/458 bp] and MH975214 [701/701 bp]). A maximum likelihood phylogenetic tree was constructed by combining all sequenced loci in IQTREE web servers. The isolate JXAA-1 clustered with Alternaria alternata (CBS 121336). The fungus associated with postharvest fruit rot on Z. mauritiana was thus identified as A. alternata. To evaluate the pathogenicity, six surface sterilized fruits were wounded by a sterile scalpel and inoculated with a 10 μl drop of spore suspension (1 × 105 conidia/ml) of isolate JXAA-1. Another six fruits were inoculated with sterilized ddH2O as control and the experiment was repeated three times. All fruits were incubated at 25°C and 80% relative humidity. After 5 days, all the wounded fruit inoculated with A. alternata showed similar symptoms to those observed previously, while the control fruits remained healthy. A. alternata was consistently reisolated from infected fruit and confirmed by morphological and molecular data, fulfilling Koch's postulates. A. alternata has previously been reported causing leaf spot and fruit rot on Chinese jujube (Ziziphus jujuba) in China (Bai et al. 2015; Li et al. 2021). But to our knowledge, this is the first report of A. alternata causing postharvest fruit rot on Indian jujube (Z. mauritiana) in China. Therefore, managers should pay more attention to postharvest fruit rot of jujube caused by A. alternata, the foam bag is put on after the membrane bag is sealed, the broken or infected fruit is picked out in time to reduce the spread of pathogenic fungus.
    Language English
    Publishing date 2024-04-14
    Publishing country United States
    Document type Journal Article
    ZDB-ID 754182-x
    ISSN 0191-2917
    ISSN 0191-2917
    DOI 10.1094/PDIS-01-24-0233-PDN
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Quantization of linear acoustic and elastic wave models in characterizations of isomorphism.

    Yang, Chen

    Scientific reports

    2024  Volume 14, Issue 1, Page(s) 8759

    Abstract: From the macroscopic to the microscopic world, quantum mechanical effects in acoustics and elastic waves have become increasingly important. Observations on the quantum effects of acoustic and elastic waves using experimental methods have been reported ... ...

    Abstract From the macroscopic to the microscopic world, quantum mechanical effects in acoustics and elastic waves have become increasingly important. Observations on the quantum effects of acoustic and elastic waves using experimental methods have been reported in the literature. However, the conventional formulations of acoustic and elastic waves are still mainly governed by classical models. In this study, we investigated the quantization of acoustic and elastic waves using generalized Lorenz gauges. The potential variables of acoustic and elastic waves can be quantized in a manner similar to that of electrodynamics. The results include the Schrödinger equation with minimal coupling between the field and particles. The quantization of field variables is established as a consequence of the gauge symmetry property of the Schrödinger equation. Later, we explored the connections between the parallel formulations of mechanics and waves through an algebraic aspect. This highlights the isomorphism pattern from the theoretical characterization within the parallel formulations. To support the results, the derivations of potential formulations based on Lorenz gauges and functional mapping between field variables are presented.
    Language English
    Publishing date 2024-04-16
    Publishing country England
    Document type Journal Article
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-024-57092-0
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Evaluating economic efficiency of the national high-tech industrial development districts in the Yangtze River Delta by stochastic frontier analysis.

    Yang, Chao

    Heliyon

    2024  Volume 10, Issue 9, Page(s) e30128

    Abstract: The High-tech Industrial Development Districts (HIDDs) are technological engines for the regional economy in China. The Chinese government implemented the Torch Initiative to accelerate industrial agglomeration and innovation development by ... ...

    Abstract The High-tech Industrial Development Districts (HIDDs) are technological engines for the regional economy in China. The Chinese government implemented the Torch Initiative to accelerate industrial agglomeration and innovation development by administratively upgrading the local HIDDs into a national list since 1989. The policy intervention emphasizes the labor and capital inputs on science and technology. The study adopts the Stochastic Frontier Analysis (SFA) to understand the economic efficiency of the enlisted national HIDDs in the Yangtze River Delta. The results suggest that the average efficiency trends of the all-in-total sales, product sales and commodity sales are decreasing while that of technology sales is increasing from 2007 to 2019. In the total sales efficiency evaluation, most early-enrolled HIDDs are in the high-efficiency group whereas the newcomers are in the low-efficiency group. The Nantong HIDD has the highest efficiency, followed by Wuxi, Taizhou, Suzhou, Nanjing, Shanghai ZJ, Xiaoshan, Ningbo, Suzhou IP and Jiangyin HIDDs. Huainan, Huaian, Tongling, Shanghai ZZ, Lianyungang and Suqian HIDDs rank very low in the total sales evaluation. Besides, Hangzhou, Nantong and Ningbo HIDDs rank first in the technology, product and commodity sales efficiency evaluation correspondingly. In addition, the increase of S&T labor inputs would decrease the efficiency of the product, commodity and total sales while the increase of the S&T capital inputs is as expected a facilitator to the efficiency of product, commodity and total sales. This study contributes to the discussion on the role of political intervention in technological innovation by breaking down the economic efficiency into three major parts, the efficiency of technology, product and commodity sales. The findings could help policymakers strike a balance between the human and capital inputs in regional innovation capability.
    Language English
    Publishing date 2024-04-20
    Publishing country England
    Document type Journal Article
    ZDB-ID 2835763-2
    ISSN 2405-8440
    ISSN 2405-8440
    DOI 10.1016/j.heliyon.2024.e30128
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Digital economy drives regional industrial structure upgrading: Empirical evidence from China's comprehensive big data pilot zone policy.

    Yang, Caihong

    PloS one

    2023  Volume 18, Issue 12, Page(s) e0295609

    Abstract: With the development of the digital economy, industrial structure upgrading plays an important role in realizing high-quality development. Exploiting the quasi-natural experimental setting provided by the Big Data Comprehensive Pilot Zone (BDCPZ) policy ... ...

    Abstract With the development of the digital economy, industrial structure upgrading plays an important role in realizing high-quality development. Exploiting the quasi-natural experimental setting provided by the Big Data Comprehensive Pilot Zone (BDCPZ) policy in China in 2016, this study evaluates the impacts of the BDCPZ policies on regional industrial structure upgrading using a combination of propensity score matching and difference-in-differences (PSM-DID) with panel data of 30 regions for the period 2008-2021. The results are as follows: (1) BDCPZ policies significantly promote regional industrial structure upgrading. This finding holds after conducting the placebo test and replacing explained variables. (2) BDCPZ policies enhance upgrading through technological innovation and financial deepening. (3) Heterogeneity analysis shows that the promotional effect of BDCPZ policies on industrial structure upgrading is more obvious in economically developed regions, megacities, and east-central regions; overall, regions with high industrialization benefit more. These findings have important implications: First, they provide new empirical evidence from the perspective of policy evaluation on how the digital economy affects industrial structure upgrading. Second, this study sheds light on the mechanism underlying this relationship, helping us understand how the digital economy can further affect the development of the industrial structure. Third, the policy effect is heterogenous, providing a scientific basis for the government to formulate differentiated implementation policies for different regions. This can help local industrial transformation and upgrading, and economic development in these regions through the implementation of big data and digital technologies.
    MeSH term(s) Big Data ; Industry ; Economic Development ; China ; Policy
    Language English
    Publishing date 2023-12-08
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2267670-3
    ISSN 1932-6203 ; 1932-6203
    ISSN (online) 1932-6203
    ISSN 1932-6203
    DOI 10.1371/journal.pone.0295609
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Prediction of hearing preservation after acoustic neuroma surgery based on SMOTE-XGBoost.

    Yang, Cenyi

    Mathematical biosciences and engineering : MBE

    2023  Volume 20, Issue 6, Page(s) 10757–10772

    Abstract: Prior to the surgical removal of an acoustic neuroma, the majority of patients anticipate that their hearing will be preserved to the greatest possible extent following surgery. This paper proposes a postoperative hearing preservation prediction model ... ...

    Abstract Prior to the surgical removal of an acoustic neuroma, the majority of patients anticipate that their hearing will be preserved to the greatest possible extent following surgery. This paper proposes a postoperative hearing preservation prediction model for the characteristics of class-imbalanced hospital real data based on the extreme gradient boost tree (XGBoost). In order to eliminate sample imbalance, the synthetic minority oversampling technique (SMOTE) is applied to increase the number of underclass samples in the data. Multiple machine learning models are also used for the accurate prediction of surgical hearing preservation in acoustic neuroma patients. In comparison to research results from existing literature, the experimental results found the model proposed in this paper to be superior. In summary, the method this paper proposes can make a significant contribution to the development of personalized preoperative diagnosis and treatment plans for patients, leading to effective judgment for the hearing retention of patients with acoustic neuroma following surgery, a simplified long medical treatment process and saved medical resources.
    MeSH term(s) Humans ; Neuroma, Acoustic/surgery ; Retrospective Studies ; Hearing
    Language English
    Publishing date 2023-06-15
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2265126-3
    ISSN 1551-0018 ; 1551-0018
    ISSN (online) 1551-0018
    ISSN 1551-0018
    DOI 10.3934/mbe.2023477
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Understanding the efficiency of "political attention and governance action" on marine waste discharge in the coastal provinces in China.

    Yang, Chao

    Marine pollution bulletin

    2023  Volume 195, Page(s) 115458

    Abstract: This study examines the "black box" of the policy process by evaluating the efficiency of "political attention and governance action" as a two-stage continuum and investigating the influencing factors in marine waste discharge governance. The results of ... ...

    Abstract This study examines the "black box" of the policy process by evaluating the efficiency of "political attention and governance action" as a two-stage continuum and investigating the influencing factors in marine waste discharge governance. The results of empirical analysis in the 11 Chinese coastal provincial regions suggest that the overall efficiency fluctuated from 1999 to 2016 with a minor reduction. The developed provinces such as Jiangsu, Zhejiang, Shanghai and Guangdong have low efficiency in overall evaluation. In the first stage, the transferring efficiency from political attention to actions does not change considerably despite fluctuations in 2012-2016. The second-stage efficiency, or the efficiency of the governance actions, has been declining since 2008 except for a brief spike in 2014. There exists a feedback impact between the two stages. Economic competition, as measured by the average GDP of neighbouring provinces, has more negative impacts on the first-stage efficiency.
    MeSH term(s) China ; Economic Development
    Language English
    Publishing date 2023-08-31
    Publishing country England
    Document type Journal Article
    ZDB-ID 2001296-2
    ISSN 1879-3363 ; 0025-326X
    ISSN (online) 1879-3363
    ISSN 0025-326X
    DOI 10.1016/j.marpolbul.2023.115458
    Database MEDical Literature Analysis and Retrieval System OnLINE

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