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  1. Article ; Online: A versatile synthetic approach toward diversity libraries using monosaccharide scaffolds.

    Thanh, Giang Le / Abbenante, Giovanni / Adamson, George / Becker, Bernd / Clark, Chris / Condie, Glenn / Falzun, Tania / Grathwohl, Matthias / Gupta, Praveer / Hanson, Michael / Huynh, Ngoc / Katavic, Peter / Kuipers, Krystle / Lam, Ann / Liu, Ligong / Mann, Maretta / Mason, Jeff / McKeveney, Declan / Muldoon, Craig /
    Pearson, Andrew / Rajaratnam, Premraj / Ryan, Sarah / Tometzki, Gerry / Verquin, Geraldine / Waanders, Jennifer / West, Michael / Wilcox, Neil / Wimmer, Norbert / Yau, Annika / Zuegg, Johannes / Meutermans, Wim

    The Journal of organic chemistry

    2010  Volume 75, Issue 1, Page(s) 197–203

    Abstract: The pyranose scaffold is unique in its ability to position pharmacophore substituents in various ways in 3D space, and unique pharmacophore scanning libraries could be envisaged that focus on scanning topography rather than diversity in the type of ... ...

    Abstract The pyranose scaffold is unique in its ability to position pharmacophore substituents in various ways in 3D space, and unique pharmacophore scanning libraries could be envisaged that focus on scanning topography rather than diversity in the type of substituents. Approaches have been described that make use of amine and acid functionalities on the pyranose scaffolds to append substituents, and this has enabled the generation of libraries of significant structural diversity. Our general aim was to generate libraries of pyranose-based drug-like mimetics, where the substituents are held close to the scaffold, in order to obtain molecules with better defined positions for the pharmacophore substituents. Here we describe the development of a versatile synthetic route toward peptide mimetics build on 2-amino pyranose scaffolds. The method allows introduction of a wide range of substituent types, it is regio- and stereospecific, and the later diversity steps are performed on solid phase. Further, the same process was applied on glucose and allose scaffolds, in the exemplified cases, and is likely adaptable to other pyranose building blocks. The methods developed in this work give access to molecules that position the three selected binding elements in various 3D orientations on a pyranose scaffold and have been applied for the production of a systematically diverse library of several hundred monosaccharide-based mimetics.
    MeSH term(s) Amines/chemistry ; Combinatorial Chemistry Techniques ; Glycosylation ; Magnetic Resonance Spectroscopy ; Molecular Structure ; Monosaccharides/chemical synthesis ; Monosaccharides/chemistry ; Peptides/chemical synthesis ; Peptides/chemistry ; Sugar Acids/chemical synthesis ; Sugar Acids/chemistry
    Chemical Substances Amines ; Monosaccharides ; Peptides ; Sugar Acids
    Language English
    Publishing date 2010-01-01
    Publishing country United States
    Document type Journal Article
    ZDB-ID 123490-0
    ISSN 1520-6904 ; 0022-3263
    ISSN (online) 1520-6904
    ISSN 0022-3263
    DOI 10.1021/jo9021919
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Biological diversity from a structurally diverse library: systematically scanning conformational space using a pyranose scaffold.

    Abbenante, Giovanni / Becker, Bernd / Blanc, Sébastien / Clark, Chris / Condie, Glenn / Fraser, Graeme / Grathwohl, Matthias / Halliday, Judy / Henderson, Senka / Lam, Ann / Liu, Ligong / Mann, Maretta / Muldoon, Craig / Pearson, Andrew / Premraj, Rajaratnam / Ramsdale, Tracie / Rossetti, Tony / Schafer, Karl / Le Thanh, Giang /
    Tometzki, Gerald / Vari, Frank / Verquin, Géraldine / Waanders, Jennifer / West, Michael / Wimmer, Norbert / Yau, Annika / Zuegg, Johannes / Meutermans, Wim

    Journal of medicinal chemistry

    2010  Volume 53, Issue 15, Page(s) 5576–5586

    Abstract: Success in discovering bioactive peptide mimetics is often limited by the difficulties in correctly transposing known binding elements of the active peptide onto a small and metabolically more stable scaffold while maintaining bioactivity. Here we ... ...

    Abstract Success in discovering bioactive peptide mimetics is often limited by the difficulties in correctly transposing known binding elements of the active peptide onto a small and metabolically more stable scaffold while maintaining bioactivity. Here we describe a scanning approach using a library of pyranose-based peptidomimetics that is structurally diverse in a systematic manner, designed to cover all possible conformations of tripeptide motifs containing two aromatic groups and one positive charge. Structural diversity was achieved by efficient selection of various chemoforms, characterized by a choice of pyranose scaffold of defined chirality and substitution pattern. A systematic scanning library of 490 compounds was thus designed, produced, and screened in vitro for activity at the somatostatin (sst(1-5)) and melanin-concentrating hormone (MCH(1)) receptors. Bioactive compounds were found for each target, with specific chemoform preferences identified in each case, which can be used to guide follow-on drug discovery projects without the need for scaffold hopping.
    MeSH term(s) Amino Acids/chemistry ; Animals ; Binding, Competitive ; CHO Cells ; Cricetinae ; Cricetulus ; Databases, Factual ; Humans ; Models, Molecular ; Molecular Conformation ; Molecular Mimicry ; Monosaccharides/chemistry ; Monosaccharides/pharmacology ; Oligopeptides/chemistry ; Oligopeptides/pharmacology ; Radioligand Assay ; Receptors, Somatostatin/antagonists & inhibitors ; Stereoisomerism ; Structure-Activity Relationship
    Chemical Substances Amino Acids ; MCHR1 protein, human ; Monosaccharides ; Oligopeptides ; Receptors, Somatostatin
    Language English
    Publishing date 2010-08-12
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 218133-2
    ISSN 1520-4804 ; 0022-2623
    ISSN (online) 1520-4804
    ISSN 0022-2623
    DOI 10.1021/jm1002777
    Database MEDical Literature Analysis and Retrieval System OnLINE

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