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  1. Article ; Online: Multi-Omics Analysis Reveals That Anthocyanin Degradation and Phytohormone Changes Regulate Red Color Fading in Rapeseed (

    Huang, Lan / Lin, Baogang / Hao, Pengfei / Yi, Kaige / Li, Xi / Hua, Shuijin

    International journal of molecular sciences

    2024  Volume 25, Issue 5

    Abstract: Flower color is an important trait for the ornamental value of colored rapeseed ( ...

    Abstract Flower color is an important trait for the ornamental value of colored rapeseed (
    MeSH term(s) Brassica napus ; Plant Growth Regulators ; Anthocyanins ; Multiomics ; Plant Breeding ; Brassica rapa ; Flavonoids ; Flowers ; Gene Expression Regulation, Plant ; Color ; Cyclopentanes ; Oxylipins
    Chemical Substances Plant Growth Regulators ; Anthocyanins ; Flavonoids ; jasmonic acid (6RI5N05OWW) ; Cyclopentanes ; Oxylipins
    Language English
    Publishing date 2024-02-23
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms25052577
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Elevated ROS Levels Caused by Reductions in GSH and AsA Contents Lead to Grain Yield Reduction in Qingke under Continuous Cropping.

    Gao, Xue / Tan, Jianxin / Yi, Kaige / Lin, Baogang / Hao, Pengfei / Jin, Tao / Hua, Shuijin

    Plants (Basel, Switzerland)

    2024  Volume 13, Issue 7

    Abstract: Continuous spring cropping of Qingke ( ...

    Abstract Continuous spring cropping of Qingke (
    Language English
    Publishing date 2024-03-31
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2704341-1
    ISSN 2223-7747
    ISSN 2223-7747
    DOI 10.3390/plants13071003
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Quantitative proteomic analysis of cattle-yak and yak longissimus thoracis provides insights into the differential mechanisms of meat quality

    Chang, Xinping / Xu, Yisha / Cheng, Lei / Yi, Kaige / Gu, Xuedong / Luo, Zhang / Zhang, Jiamin / Wang, Jinqiu / Geng, Fang

    Food Research International. 2023 Nov., v. 173 p.113253-

    2023  

    Abstract: In this study, proteins of cattle-yak longissimus thoracis (CYLT) and yak longissimus thoracis (YLT) were compared using tandem mass tag-labeled quantitative proteomic analysis. A total of 157 proteins were screened as differentially abundant proteins ( ... ...

    Abstract In this study, proteins of cattle-yak longissimus thoracis (CYLT) and yak longissimus thoracis (YLT) were compared using tandem mass tag-labeled quantitative proteomic analysis. A total of 157 proteins were screened as differentially abundant proteins (DAPs) derived from 1551 quantitative proteins. Bioinformatics analysis revealed that the upregulated DAPs in CYLT were mainly involved in energy metabolism, oxidative stress, muscle fiber structure, and extracellular matrix (ECM), while the downregulated DAPs were mainly involved in energy metabolism and ECM function. The upregulated myoglobin, downregulation of NADH dehydrogenase, and upregulation of cytochrome oxidase indicated that CYLT initiates compensatory regulation in response to hypoxic high-altitude environments. Two differentially abundant myosins and five collagens suggested that CYLT and YLT may have distinct differences in the assembly structure of muscle fibers and connective tissue. These differences in energy metabolism and muscle structure will inevitably affect the postmortem physiology of “muscle to meat” and consequently the meat qualities. Therefore, our results will provide important clues to gain insight into the potential causes of meat quality differences between cattle-yak and yak based on high-altitude response.
    Keywords NADH dehydrogenase ; altitude ; bioinformatics ; cytochrome-c oxidase ; energy metabolism ; extracellular matrix ; food research ; longissimus muscle ; meat ; meat quality ; muscle fibers ; myoglobin ; myosin ; oxidative stress ; proteomics ; yaks ; Cattle-yak ; Yak ; Oxidative phosphorylation ; Muscle fiber ; Collagen
    Language English
    Dates of publication 2023-11
    Publishing place Elsevier Ltd
    Document type Article ; Online
    ZDB-ID 1111695-x
    ISSN 1873-7145 ; 0963-9969
    ISSN (online) 1873-7145
    ISSN 0963-9969
    DOI 10.1016/j.foodres.2023.113253
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  4. Article ; Online: Transcriptomic Analysis of the Reduction in Seed Oil Content through Increased Nitrogen Application Rate in Rapeseed (

    Hao, Pengfei / Ren, Yun / Lin, Baogang / Yi, Kaige / Huang, Lan / Li, Xi / Jiang, Lixi / Hua, Shuijin

    International journal of molecular sciences

    2023  Volume 24, Issue 22

    Abstract: Nitrogen is essential for improving the seed oil yield of rapeseed ( ...

    Abstract Nitrogen is essential for improving the seed oil yield of rapeseed (
    MeSH term(s) Humans ; Brassica napus/metabolism ; Transcriptome ; Nitrogen/metabolism ; Brassica rapa/genetics ; Brassica rapa/metabolism ; Seeds/metabolism ; Plant Oils/metabolism
    Chemical Substances Nitrogen (N762921K75) ; Plant Oils
    Language English
    Publishing date 2023-11-12
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms242216220
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: How Antioxidants, Osmoregulation, Genes and Metabolites Regulate the Late Seeding Tolerance of Rapeseeds (

    Hao, Pengfei / Lin, Baogang / Ren, Yun / Hu, Hao / Lou, Weidong / Yi, Kaige / Xue, Bowen / Huang, Lan / Li, Xi / Hua, Shuijin

    Antioxidants (Basel, Switzerland)

    2023  Volume 12, Issue 11

    Abstract: Rapeseed seeding dates are largely delayed under the rice-rape rotation system, but how rapeseeds adapt to the delayed environment remains unclear. Here, five seeding dates (20 October, 30 October, 10 November, 20 November and 30 November, T1 to T5) were ...

    Abstract Rapeseed seeding dates are largely delayed under the rice-rape rotation system, but how rapeseeds adapt to the delayed environment remains unclear. Here, five seeding dates (20 October, 30 October, 10 November, 20 November and 30 November, T1 to T5) were set and the dynamic differences between two late-seeding-tolerant (LST) and two late-seeding-sensitive (LSS) rapeseed cultivars were investigated in a field experiment. The growth was significantly repressed and the foldchange (LST/LSS) of yield increased from 1.50-T1 to 2.64-T5 with the delay in seeding. Both LST cultivars showed higher plant coverage than the LSS cultivars according to visible/hyperspectral imaging and the vegetation index acquired from an unmanned aerial vehicle. Fluorescence imaging, DAB and NBT staining showed that the LSS cultivars suffered more stress damage than the LST cultivars. Antioxidant enzymes (SOD, POD, CAT, APX) and osmoregulation substances (proline, soluble sugar, soluble protein) were decreased with the delay in seeding, while the LST cultivar levels were higher than those of the LSS cultivars. A comparative analysis of transcriptomes and metabolomes showed that 55 pathways involving 123 differentially expressed genes (DEGs) and 107 differentially accumulated metabolites (DAMs) participated in late seeding tolerance regulation, while 39 pathways involving 60 DEGs and 68 DAMs were related to sensitivity. Levanbiose, α-isopropylmalate, s-ribosyl-L-homocysteine, lauroyl-CoA and argino-succinate were differentially accumulated in both cultivars, while genes including isocitrate dehydrogenase, pyruvate kinase, phosphoenolpyruvate carboxykinase and newgene_7532 were also largely regulated. This study revealed the dynamic regulation mechanisms of rapeseeds on late seeding conditions, which showed considerable potential for the genetic improvement of rapeseed.
    Language English
    Publishing date 2023-10-26
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2704216-9
    ISSN 2076-3921
    ISSN 2076-3921
    DOI 10.3390/antiox12111915
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Quantitative proteomic analysis of cattle-yak and yak longissimus thoracis provides insights into the differential mechanisms of meat quality.

    Chang, Xinping / Xu, Yisha / Cheng, Lei / Yi, Kaige / Gu, Xuedong / Luo, Zhang / Zhang, Jiamin / Wang, Jinqiu / Geng, Fang

    Food research international (Ottawa, Ont.)

    2023  Volume 173, Issue Pt 1, Page(s) 113253

    Abstract: In this study, proteins of cattle-yak longissimus thoracis (CYLT) and yak longissimus thoracis (YLT) were compared using tandem mass tag-labeled quantitative proteomic analysis. A total of 157 proteins were screened as differentially abundant proteins ( ... ...

    Abstract In this study, proteins of cattle-yak longissimus thoracis (CYLT) and yak longissimus thoracis (YLT) were compared using tandem mass tag-labeled quantitative proteomic analysis. A total of 157 proteins were screened as differentially abundant proteins (DAPs) derived from 1551 quantitative proteins. Bioinformatics analysis revealed that the upregulated DAPs in CYLT were mainly involved in energy metabolism, oxidative stress, muscle fiber structure, and extracellular matrix (ECM), while the downregulated DAPs were mainly involved in energy metabolism and ECM function. The upregulated myoglobin, downregulation of NADH dehydrogenase, and upregulation of cytochrome oxidase indicated that CYLT initiates compensatory regulation in response to hypoxic high-altitude environments. Two differentially abundant myosins and five collagens suggested that CYLT and YLT may have distinct differences in the assembly structure of muscle fibers and connective tissue. These differences in energy metabolism and muscle structure will inevitably affect the postmortem physiology of "muscle to meat" and consequently the meat qualities. Therefore, our results will provide important clues to gain insight into the potential causes of meat quality differences between cattle-yak and yak based on high-altitude response.
    MeSH term(s) Animals ; Cattle ; Proteomics ; Meat/analysis ; Energy Metabolism ; Paraspinal Muscles
    Language English
    Publishing date 2023-07-07
    Publishing country Canada
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1111695-x
    ISSN 1873-7145 ; 0963-9969
    ISSN (online) 1873-7145
    ISSN 0963-9969
    DOI 10.1016/j.foodres.2023.113253
    Database MEDical Literature Analysis and Retrieval System OnLINE

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    In stock of ZB MED Bonn / Germany

    Z 2972: Show issues

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    Inter-library loan at ZB MED

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  7. Article: Comparison of muscle lipidomes between cattle-yak, yak, and cattle using UPLC–MS/MS

    Gu, Xuedong / Sun, Wenjing / Yi, Kaige / Yang, Lin / Chi, Fumin / Luo, Zhang / Wang, Jinqiu / Zhang, Jiamin / Wang, Wei / Yang, Tao / Geng, Fang

    Journal of food composition and analysis. 2021 Oct., v. 103

    2021  

    Abstract: The quantitative comparisons of longissimus thoracis lipidomes among cattle-yak, yak, and cattle were carried out, and differentially abundant lipids (DALs) related to post-mortem physiology and meat quality were examined and discussed. Multivariate ... ...

    Abstract The quantitative comparisons of longissimus thoracis lipidomes among cattle-yak, yak, and cattle were carried out, and differentially abundant lipids (DALs) related to post-mortem physiology and meat quality were examined and discussed. Multivariate statistical analyses showed that the muscle lipidomes of cattle-yak, yak, and cattle were significantly different. Quantitative analysis results showed that there were 108 (cattle-yak vs. cattle), 106 (cattle-yak vs. yak), and 77 (yak vs. cattle) DALs between different muscles. Phospholipids containing long-chain polyunsaturated fatty acids were more abundant in the muscles of plateau cattle (cattle-yak and yak) than plain cattle (cattle), which is a bonus for the nutritional value of plateau cattle meat. Long-chain acylcarnitines accumulated in yak muscle, suggesting different levels of fatty acid β-oxidation and a potential influence on the post-mortem physiology of yak meat. The results show that the muscle lipid profiles of cattle-yak, yak, and cattle were significantly different, and could clearly distinguish by the OPLS-DA analysis. DALs reveal the difference in energy metabolism and lipid nutrition quality between plateau cattle (cattle-yak and yak) muscles and cattle muscle.
    Keywords cattle ; energy metabolism ; food composition ; lipidomics ; longissimus muscle ; meat ; meat quality ; nutrition ; nutritive value ; phospholipids ; quantitative analysis ; yaks
    Language English
    Dates of publication 2021-10
    Publishing place Elsevier Inc.
    Document type Article
    ZDB-ID 743572-1
    ISSN 0889-1575 ; 1096-0481
    ISSN 0889-1575 ; 1096-0481
    DOI 10.1016/j.jfca.2021.104113
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