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Artikel: Systematic analysis of the UDP-glucosyltransferase family: discovery of a member involved in rutin biosynthesis in

Gan, Yuwei / Yu, Bingwei / Liu, Renjian / Shu, Bingbing / Liang, Yonggui / Zhao, Yafei / Qiu, Zhengkun / Yan, Shuangshuang / Cao, Bihao

Frontiers in plant science

2023 Band 14, Seite(n) 1310080

Abstract: Eggplant ( ...

Abstract	Eggplant (
Sprache	Englisch
Erscheinungsdatum	2023-12-22
Erscheinungsland	Switzerland
Dokumenttyp	Journal Article
ZDB-ID	2613694-6
ISSN	1664-462X
ISSN	1664-462X
DOI	10.3389/fpls.2023.1310080
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel: A putative E3 ubiquitin ligase substrate receptor degrades transcription factor SmNAC to enhance bacterial wilt resistance in eggplant.

Yan, Shuangshuang / Wang, Yixi / Yu, Bingwei / Gan, Yuwei / Lei, Jianjun / Chen, Changming / Zhu, Zhangsheng / Qiu, Zhengkun / Cao, Bihao

Horticulture research

2023 Band 11, Heft 1, Seite(n) uhad246

Abstract: Bacterial wilt caused ... ...

Abstract	Bacterial wilt caused by
Sprache	Englisch
Erscheinungsdatum	2023-11-27
Erscheinungsland	England
Dokumenttyp	Journal Article
ISSN	2662-6810
ISSN	2662-6810
DOI	10.1093/hr/uhad246
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Transcriptome analysis reveals key genes involved in the eggplant response to high-temperature stress

Liu, Renjian / Shu, Bingbing / Wang, Yuyuan / Yu, Bingwei / Wang, Yixi / Gan, Yuwei / Liang, Yonggui / Qiu, Zhengkun / Yang, Jianguo / Yan, Shuangshuang / Cao, Bihao

Environmental and Experimental Botany. 2023 July, v. 211 p.105369-

2023

Abstract: High-temperature stress (HTS) affects the quality and yield of vegetable crops. Eggplant seedlings, flower organs and fruits are affected by HTS. However, the molecular mechanism underlying heat resistance in eggplant remains unclear. A thermotolerant ... ...

Abstract	High-temperature stress (HTS) affects the quality and yield of vegetable crops. Eggplant seedlings, flower organs and fruits are affected by HTS. However, the molecular mechanism underlying heat resistance in eggplant remains unclear. A thermotolerant eggplant line, E390, and a thermosensitive eggplant line, HM, were identified in this study. The differences in the physiological indices, chlorophyll fluorescence, and photosynthetic system parameters of the E390 and HM eggplant lines were analysed under HTS. To better study gene expression under HTS, a transcriptome analysis of eggplant leaves subjected to 42 ℃ high-temperature treatment (HTT) for 0, 1, 6, and 12 h was performed. Gene Ontology (GO) enrichment, Kyoto Encyclopaedia of Genes and Genomes (KEGG) enrichment, and expression trend analysis of the differentially expressed genes (DEGs) identified were performed. The expression patterns of the genes related to transcription factors (TFs), hormones, and heat stress were further analysed. Twenty-three candidate genes responding to HTS were identified. Moreover, their expression patterns were verified by quantitative real-time RTPCR (qRTPCR). Yeast experiment results revealed that HSP70, MYB44, AFP2, HSFA8, EGY3, HSFA3, and TIFY6B might enhance the heat resistance of eggplant. This study provides a reference for further research on the molecular mechanism of eggplant in response to HTS.
Schlagwörter	chlorophyll ; eggplants ; flowers ; gene expression ; gene expression regulation ; gene ontology ; genome ; heat stress ; heat tolerance ; photosynthesis ; thermosensitivity ; transcriptomics ; yeasts ; HTS ; HTT ; GO ; KEGG ; DEG ; TF ; qRTPCR ; FAO ; Hsf-Hsp ; ER ; HSF ; HSR ; UPR ; ABA ; SA ; ET ; CK ; GA ; ROS ; RNA-seq ; MDA ; TBA ; Pro ; NBT ; DAB ; SOD ; POD ; AsA ; GSH ; mRNA ; rRNA ; PCA ; FDR ; STEM ; WGCNA ; SD/-Ura ; RT ; NPQ ; rETR ; FPKM ; MAPK ; JA ; Eggplant ; Transcriptome analysis ; Heat resistance
Sprache	Englisch
Erscheinungsverlauf	2023-07
Erscheinungsort	Elsevier B.V.
Dokumenttyp	Artikel ; Online
Anmerkung	Use and reproduction
ZDB-ID	195968-2
ISSN	0098-8472
ISSN	0098-8472
DOI	10.1016/j.envexpbot.2023.105369
Datenquelle	NAL Katalog (AGRICOLA)

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Artikel ; Online: CsIVP Modulates Low Nitrogen and High-Temperature Resistance in Cucumber.

Yan, Shuangshuang / Yu, Bingwei / Ming, Fangyan / Liang, Yonggui / Zhong, Yanting / Wang, Zhongyi / Zhang, Xiaolan / Li, Xuexian / Qiu, Zhengkun / Cao, Bihao

Plant & cell physiology

2022 Band 63, Heft 5, Seite(n) 605–617

Abstract: Crop plants experience various abiotic stresses that reduce yield and quality. Although several adaptative physiological and defense responses to single stress have been identified, the behavior and mechanisms of plant response to multiple stresses ... ...

Abstract	Crop plants experience various abiotic stresses that reduce yield and quality. Although several adaptative physiological and defense responses to single stress have been identified, the behavior and mechanisms of plant response to multiple stresses remain underexamined. Herein, we determined that the leaf and vascular changes in Cucumis sativus Irregular Vasculature Patterning (CsIVP)-RNAi cucumber plants can enhance resistance to nitrogen deficiency and high-temperature stress. CsIVP negatively regulated high nitrate affinity transporters (NRT2.1, NRT2.5) and reallocation transporters (NRT1.7, NRT1.9, NRT1.12) under low nitrogen stress. Furthermore, CsIVP-RNAi plants have high survival rate with low heat injury level under high-temperature condition. Several key high-temperature regulators, including Hsfs, Hsps, DREB2C, MBF1b and WRKY33 have significant expression in CsIVP-RNAi plants. CsIVP negatively mediated high-temperature responses by physically interacting with CsDREB2C. Altogether, these results indicated that CsIVP integrates innate programming of plant development, nutrient transport and high-temperature resistance, providing a potentially valuable target for breeding nutrient-efficient and heat-resistant crops.
Mesh-Begriff(e)	Cucumis sativus/metabolism ; Gene Expression Regulation, Plant ; Hot Temperature ; Nitrogen/metabolism ; Plant Breeding ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Temperature
Chemische Substanzen	Plant Proteins ; Nitrogen (N762921K75)
Sprache	Englisch
Erscheinungsdatum	2022-02-08
Erscheinungsland	Japan
Dokumenttyp	Journal Article
ZDB-ID	208907-5
ISSN	1471-9053 ; 0032-0781
ISSN (online)	1471-9053
ISSN	0032-0781
DOI	10.1093/pcp/pcac020
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Heat Stress Resistance Mechanisms of Two Cucumber Varieties from Different Regions.

Yu, Bingwei / Ming, Fangyan / Liang, Yonggui / Wang, Yixi / Gan, Yuwei / Qiu, Zhengkun / Yan, Shuangshuang / Cao, Bihao

International journal of molecular sciences

2022 Band 23, Heft 3

Abstract: High temperatures affect the yield and quality of vegetable crops. Unlike thermosensitive plants, thermotolerant plants have excellent systems for withstanding heat stress. This study evaluated various heat resistance indexes of the thermotolerant ... ...

Abstract	High temperatures affect the yield and quality of vegetable crops. Unlike thermosensitive plants, thermotolerant plants have excellent systems for withstanding heat stress. This study evaluated various heat resistance indexes of the thermotolerant cucumber (TT) and thermosensitive cucumber (TS) plants at the seedling stage. The similarities and differences between the regulatory genes were assessed through transcriptome analysis to understand the mechanisms for heat stress resistance in cucumber. The TT plants exhibited enhanced leaf status, photosystem, root viability, and ROS scavenging under high temperature compared to the TS plants. Additionally, transcriptome analysis showed that the genes involved in photosynthesis, the chlorophyll metabolism, and defense responses were upregulated in TT plants but downregulated in TS plants. Zeatin riboside (ZR), brassinosteroid (BR), and jasmonic acid (JA) levels were higher in TT plants than in TS. The heat stress increased gibberellic acid (GA) and indoleacetic acid (IAA) levels in both plant lines; however, the level of GA was higher in TT. Correlation and interaction analyses revealed that heat cucumber heat resistance is regulated by a few transcription factor family genes and metabolic pathways. Our study revealed different phenotypic and physiological mechanisms of the heat response by the thermotolerant and thermosensitive cucumber plants. The plants were also shown to exhibit different expression profiles and metabolic pathways. The heat resistant pathways and genes of two cucumber varieties were also identified. These results enhance our understanding of the molecular mechanisms of cucumber response to high-temperature stress.
Mesh-Begriff(e)	Cucumis sativus/genetics ; Cucumis sativus/metabolism ; Gene Expression Profiling ; Gene Expression Regulation, Plant ; Heat-Shock Response/genetics ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Seedlings/genetics ; Seedlings/metabolism ; Transcriptome
Chemische Substanzen	Plant Proteins
Sprache	Englisch
Erscheinungsdatum	2022-02-05
Erscheinungsland	Switzerland
Dokumenttyp	Journal Article
ZDB-ID	2019364-6
ISSN	1422-0067 ; 1422-0067 ; 1661-6596
ISSN (online)	1422-0067
ISSN	1422-0067 ; 1661-6596
DOI	10.3390/ijms23031817
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Genome-Wide Analysis and Characterization of Eggplant F-Box Gene Superfamily: Gene Evolution and Expression Analysis under Stress.

Wang, Yixi / Li, Chuhao / Yan, Shuangshuang / Yu, Bingwei / Gan, Yuwei / Liu, Renjian / Qiu, Zhengkun / Cao, Bihao

International journal of molecular sciences

2022 Band 23, Heft 24

Abstract: F-box genes play an important role in plant growth and resistance to abiotic and biotic stresses. To date, systematic analysis of F-box genes and functional annotation in eggplant ( ...

Abstract	F-box genes play an important role in plant growth and resistance to abiotic and biotic stresses. To date, systematic analysis of F-box genes and functional annotation in eggplant (
Sprache	Englisch
Erscheinungsdatum	2022-12-16
Erscheinungsland	Switzerland
Dokumenttyp	Journal Article
ZDB-ID	2019364-6
ISSN	1422-0067 ; 1422-0067 ; 1661-6596
ISSN (online)	1422-0067
ISSN	1422-0067 ; 1661-6596
DOI	10.3390/ijms232416049
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: A quick and effective method for thermostability differentiation in cucumber (Cucumis sativus L.).

Liang, Yonggui / Xie, Weiwei / Yang, Chenyu / Yu, Bingwei / Qin, Qiteng / Wang, Yixi / Gan, Yuwei / Liu, Renjian / Qiu, Zhengkun / Cao, Bihao / Yan, Shuangshuang

Physiologia plantarum

2023 Band 176, Heft 1, Seite(n) e14215

Abstract: High temperature affects the growth and production of cucumber. Selecting thermotolerant cucumber cultivars is conducive to coping with high temperatures and improving production. Thus, a quick and effective method for screening thermotolerant cucumber ... ...

Abstract	High temperature affects the growth and production of cucumber. Selecting thermotolerant cucumber cultivars is conducive to coping with high temperatures and improving production. Thus, a quick and effective method for screening thermotolerant cucumber cultivars is needed. In this study, four cucumber cultivars were used to identify heat resistance indexes. The morphological, physiological and biochemical indexes were measured. When exposed to high temperatures, thermotolerant cucumber had a more stable photosystem, membrane, and oxidation-reduction systems. The impact of high temperatures on plants is multifaceted, and the accurate discrimination of heat resistance cannot be achieved solely based on a single or multiple indicators. Therefore, principal component analysis (PCA) was employed to comprehensively evaluate the heat resistance of cucumber plants. The results showed that the heat resistance obtained by PCA was significantly correlated with the heat injury index. In addition, the stepwise regression equation identified two heat-related indices, hydrogen peroxide content (H
Mesh-Begriff(e)	Cucumis sativus/physiology ; Photosynthesis/physiology
Sprache	Englisch
Erscheinungsdatum	2023-01-13
Erscheinungsland	Denmark
Dokumenttyp	Journal Article
ZDB-ID	2020837-6
ISSN	1399-3054 ; 0031-9317
ISSN (online)	1399-3054
ISSN	0031-9317
DOI	10.1111/ppl.14215
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel: Analysis of Vitamin P Content and Inheritance Models in Eggplant

Dong, Riyue / Yu, Bingwei / Yan, Shuangshuang / Qiu, Zhengkun / Lei, Jianjun / Chen, Changming / Li, Ye / Cao, Bihao

Chinese Society for Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS) Horticultural plant journal. 2020 July, v. 6, no. 4

2020

Abstract: The eggplant (Solanum melongena L.) is rich in vitamin P (also known as rutin), which is beneficial for humans. In this study, the vitamin P contents of 53 eggplant lines were measured via UV spectrophotometry. The results showed that the vitamin P ... ...

Abstract	The eggplant (Solanum melongena L.) is rich in vitamin P (also known as rutin), which is beneficial for humans. In this study, the vitamin P contents of 53 eggplant lines were measured via UV spectrophotometry. The results showed that the vitamin P content differed significantly among the eggplant lines and the actual contents of vitamin P in fresh fruit pulp and fresh peel were 0.18–0.82 mg · g⁻¹ and 0.42–2.32 mg · g⁻¹, respectively. Furthermore, the mixed major gene and polygene inheritance model method was used for the inheritance analysis of the vitamin P content in F₂ populations of three hybridization combinations. Inheritance analysis demonstrated that the vitamin P content of these eggplant lines was a quantitative trait. One or two major genes were the contributor, and the genetic effect was an additive-dominance effect. The high vitamin P content trait was regulated by the main gene and followed an additive effect. The heritability of the major genes controlling the high vitamin P content was low, while the heritability of the major gene that controls the low vitamin P content trait was high. These results provide a theoretical basis for the breeding of eggplants with high vitamin P content.
Schlagwörter	Solanum melongena ; additive effect ; bioflavonoids ; eggplants ; fruit pulp ; heritability ; horticultural crops ; hybridization ; major genes ; quantitative traits ; raw fruit ; rutin ; spectroscopy
Sprache	Englisch
Erscheinungsverlauf	2020-07
Umfang	p. 240-246.
Erscheinungsort	Elsevier B.V.
Dokumenttyp	Artikel
Anmerkung	NAL-AP-2-clean
ISSN	2468-0141
DOI	10.1016/j.hpj.2020.05.005
Datenquelle	NAL Katalog (AGRICOLA)

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Artikel: Anthocyanin Fruit encodes an R2R3‐MYB transcription factor, SlAN2‐like, activating the transcription of SlMYBATV to fine‐tune anthocyanin content in tomato fruit

Yan, Shuangshuang / Chen, Na / Huang, Zejun / Li, Dongjing / Zhi, Junjie / Yu, Bingwei / Liu, Xiaoxi / Cao, Bihao / Qiu, Zhengkun

new phytologist. 2020 Mar., v. 225, no. 5

2020

Abstract: Anthocyanin fruit (Aft) and atroviolacea (atv) were characterized in wild tomato and can enhance anthocyanin content in tomato fruit. However, the gene underlying the Aft locus and the mechanism by which Aft and atv act remain largely unknown. In this ... ...

Abstract	Anthocyanin fruit (Aft) and atroviolacea (atv) were characterized in wild tomato and can enhance anthocyanin content in tomato fruit. However, the gene underlying the Aft locus and the mechanism by which Aft and atv act remain largely unknown. In this study, the Aft locus was fine‐mapped to an approximately 145‐kb interval on chromosome 10, excluding SlAN2 (Solyc10g086250), SlANT1 (Solyc10g086260) and SlANT1‐like (Solyc10g086270), which have previously been suggested as candidates. Thus, the R2R3‐MYB transcription factor SlAN2‐like (Solyc10g086290) was considered the best candidate gene for Aft. The CRISPR/Cas9‐mediated SlAN2‐like mutants show a much lower accumulation of anthocyanins associated with the downregulation of multiple anthocyanin‐related genes compared to the wild‐type tomato, indicating that SlAN2‐like is responsible for the Aft phenotype. The repressive function of SlMYBATV also was confirmed through the CRISPR/Cas9 approach. A yeast‐two‐hybrid assay revealed that SlMYBATV interacts with the bHLH protein SlJAF13. Furthermore, yeast‐one‐hybrid and dual‐luciferase transient expression assays showed that Aft directly binds to the SlMYBATV promoter and activates its expression. The results herein provide candidate genes to enhance anthocyanin content in tomato fruit. This research also provides insight into a mechanism involving the Aft‐SlMYBATV pathway that fine‐tunes anthocyanin accumulation in tomato fruit.
Schlagwörter	CRISPR-Cas systems ; anthocyanins ; enzymes ; fruits ; gene editing ; genes ; loci ; mutants ; phenotype ; tomatoes ; transcription (genetics) ; transcription factors ; two hybrid system techniques
Sprache	Englisch
Erscheinungsverlauf	2020-03
Umfang	p. 2048-2063.
Erscheinungsort	John Wiley & Sons, Ltd
Dokumenttyp	Artikel
Anmerkung	JOURNAL ARTICLE
ZDB-ID	208885-x
ISSN	1469-8137 ; 0028-646X
ISSN (online)	1469-8137
ISSN	0028-646X
DOI	10.1111/nph.16272
Datenquelle	NAL Katalog (AGRICOLA)

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Artikel: Identification of Candidate HY5-Dependent and -Independent Regulators of Anthocyanin Biosynthesis in Tomato

Qiu, Zhengkun / Cao, Bihao / Cui, Xia / Huang, Zejun / Hui, Qiuling / Li, Dongjing / Wang, Haijing / Yan, Shuangshuang / Yu, Bingwei

Plant & cell physiology. 2019 Mar. 01, v. 60, no. 3

2019

Abstract: High quantities of anthocyanins in plants confer potential protective benefits against biotic and abiotic stressors. Studies have shown that the bZIP transcription factor HY5 plays a key role in controlling anthocyanin accumulation in response to light. ... ...

Abstract	High quantities of anthocyanins in plants confer potential protective benefits against biotic and abiotic stressors. Studies have shown that the bZIP transcription factor HY5 plays a key role in controlling anthocyanin accumulation in response to light. However, in hy5 mutants, residual anthocyanins have been detected, indicating that other regulators exist to regulate anthocyanin biosynthesis in an HY5-independent manner. Here, we employed the CRISPR/Cas9 (clustered regularly interspersed short palindromic repeats/CRISPR-associated protein 9) system specifically to induce targeted mutagenesis of SlHY5 in the purple tomato cultivar ‘Indigo Rose’. The T2 generation of tomato plants homozygous for the null allele of the SlHY5 frameshift mutated by a 1 bp insertion contained a lower anthocyanin content. Transcriptional analysis showed that most of the anthocyanin biosynthesis structural genes and several regulatory genes were down-regulated in the hy5 mutant lines. With transcriptome analyses of the various tissues from hy5 mutant lines, eight candidate transcription factors were identified that may regulate anthocyanin biosynthesis in an HY5-independent manner. These findings deepen our understanding of how light controls anthocyanin accumulation and facilitate the identification of the regulators of anthocyanin biosynthesis in an HY5-independent manner.
Schlagwörter	abiotic stress ; anthocyanins ; biosynthesis ; CRISPR-associated proteins ; CRISPR-Cas systems ; cultivars ; gene editing ; genetic lines ; homozygosity ; mutants ; null alleles ; regulator genes ; site-directed mutagenesis ; Solanum lycopersicum ; structural genes ; tissues ; tomatoes ; transcription (genetics) ; transcription factors ; transcriptome
Sprache	Englisch
Erscheinungsverlauf	2019-0301
Umfang	p. 643-656.
Erscheinungsort	Oxford University Press
Dokumenttyp	Artikel
ZDB-ID	208907-5
ISSN	1471-9053 ; 0032-0781
ISSN (online)	1471-9053
ISSN	0032-0781
DOI	10.1093/pcp/pcy236
Datenquelle	NAL Katalog (AGRICOLA)

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