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  1. Article: Bacterial Community with Plant Growth-Promoting Potential Associated to Pioneer Plants from an Active Mexican Volcanic Complex

    Rincón-Molina, Clara Ivette / Martínez-Romero, Esperanza / Aguirre-Noyola, José Luis / Manzano-Gómez, Luis Alberto / Zenteno-Rojas, Adalberto / Rogel, Marco Antonio / Rincón-Molina, Francisco Alexander / Ruíz-Valdiviezo, Víctor Manuel / Rincón-Rosales, Reiner

    Microorganisms. 2022 Aug. 04, v. 10, no. 8

    2022  

    Abstract: Microorganisms in extreme volcanic environments play an important role in the development of plants on newly exposed substrates. In this work, we studied the structure and diversity of a bacterial community associated to Andropogon glomeratus and ... ...

    Abstract Microorganisms in extreme volcanic environments play an important role in the development of plants on newly exposed substrates. In this work, we studied the structure and diversity of a bacterial community associated to Andropogon glomeratus and Cheilanthes aemula at El Chichón volcano. The genetic diversity of the strains was revealed by genomic fingerprints and by 16S rDNA gene sequencing. Furthermore, a metagenomic analysis of the rhizosphere samples was carried out for pioneer plants growing inside and outside the volcano. Multifunctional biochemical tests and plant inoculation assays were evaluated to determine their potential as plant growth-promoting bacteria (PGPB). Through metagenomic analysis, a total of 33 bacterial phyla were identified from A. glomeratus and C. aemula rhizosphere samples collected inside the volcano, and outside the volcano 23 bacterial phyla were identified. For both rhizosphere samples, proteobacteria was the most abundant phylum. With a cultivable approach, 174 bacterial strains were isolated from the rhizosphere and tissue of plants growing outside the volcanic complex. Isolates were classified within the genera Acinetobacter, Arthrobacter, Bacillus, Burkholderia, Cupriavidus, Enterobacter, Klebsiella, Lysinibacillus, Pantoea, Pseudomonas, Serratia, Stenotrophomonas and Pandoraea. The evaluated strains were able to produce indole compounds, solubilize phosphate, synthesize siderophores, showed ACC deaminase and nitrogenase activity, and they had a positive effect on the growth and development of Capsicum chinense. The wide diversity of bacteria associated to pioneer plants at El Chichón volcano with PGPB qualities represent an alternative for the recovery of eroded environments, and they can be used efficiently as biofertilizers for agricultural crops growing under adverse conditions.
    Keywords 1-aminocyclopropane-1-carboxylate deaminase ; Acinetobacter ; Andropogon ; Arthrobacter ; Burkholderia ; Capsicum chinense ; Cheilanthes ; Cupriavidus ; Enterobacter ; Klebsiella ; Lysinibacillus ; Pandoraea ; Pantoea ; Pseudomonas ; Serratia ; Stenotrophomonas ; bacterial communities ; biofertilizers ; genes ; genetic variation ; growth and development ; indoles ; metagenomics ; nitrogenase ; phosphates ; rhizosphere ; siderophores
    Language English
    Dates of publication 2022-0804
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article
    ZDB-ID 2720891-6
    ISSN 2076-2607
    ISSN 2076-2607
    DOI 10.3390/microorganisms10081568
    Database NAL-Catalogue (AGRICOLA)

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  2. Article: Bacterial Community with Plant Growth-Promoting Potential Associated to Pioneer Plants from an Active Mexican Volcanic Complex.

    Rincón-Molina, Clara Ivette / Martínez-Romero, Esperanza / Aguirre-Noyola, José Luis / Manzano-Gómez, Luis Alberto / Zenteno-Rojas, Adalberto / Rogel, Marco Antonio / Rincón-Molina, Francisco Alexander / Ruíz-Valdiviezo, Víctor Manuel / Rincón-Rosales, Reiner

    Microorganisms

    2022  Volume 10, Issue 8

    Abstract: Microorganisms in extreme volcanic environments play an important role in the development of plants on newly exposed substrates. In this work, we studied the structure and diversity of a bacterial community associated ... ...

    Abstract Microorganisms in extreme volcanic environments play an important role in the development of plants on newly exposed substrates. In this work, we studied the structure and diversity of a bacterial community associated to
    Language English
    Publishing date 2022-08-04
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2720891-6
    ISSN 2076-2607
    ISSN 2076-2607
    DOI 10.3390/microorganisms10081568
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Biodegradation and Bioaccumulation of Decachlorobiphenyl (DCB) by Native Strain Pseudomonas extremaustralis ADA-5

    López, Miguel Angel Gómez / Zenteno-Rojas, Adalberto / Martinez-Romero, Esperanza / Rincón-Molina, Clara Ivette / Vences-Guzmán, Miguel Angel / Ruíz-Valdiviezo, Víctor Manuel / Rincón-Molina, Francisco Alexander / Manzano-Gomez, Luis Alberto / Rincón-Rosales, Reiner

    Water, air, and soil pollution. 2021 May, v. 232, no. 5

    2021  

    Abstract: Decachlorobiphenyl (DCB) is one of the 209 polychlorinated biphenyls congeners characterized by its high toxicity and chemical stability. It is produced by industrial activities. A possible strategy to eliminate DCB is by bacterial degradation. The main ... ...

    Abstract Decachlorobiphenyl (DCB) is one of the 209 polychlorinated biphenyls congeners characterized by its high toxicity and chemical stability. It is produced by industrial activities. A possible strategy to eliminate DCB is by bacterial degradation. The main objective of this study was to define the optimal conditions for biodegradation and bioaccumulation of DCB by Pseudomonas extremaustralis ADA-5 isolated from a worm intestine. Bacterial growth kinetics were determined in minimal medium with added biphenyl and DCB. By GC coupled to mass spectrometry, we found that the strain had the ability to degrade 9.75% of available DCB, using it as a carbon source and was able to accumulate 19.98% of this pollutant in biomass. Membrane lipids may be altered by DCB. Phosphatidylethanolamine (PE), phosphatidylglycerol (PG), and cardiolipin (CL) were identified by thin-layer chromatography as the membrane lipids of the cell. At 250 mg L⁻¹ of DCB in the culture medium, membranes showed a 30% decrease in the PE concentration, an 18% increase in the PG, and a 12% increase in CL. ADA-5 was able to catabolize DCB and may be used for bioremediation of highly chlorinated toxic compounds in soil.
    Keywords Pseudomonas ; air ; bacterial growth ; bioaccumulation ; biodegradation ; biomass ; bioremediation ; biphenyl ; carbon ; cardiolipins ; culture media ; growth models ; intestines ; mass spectrometry ; phosphatidylethanolamines ; pollutants ; polychlorinated biphenyls ; soil ; soil pollution ; thin layer chromatography ; toxicity ; water
    Language English
    Dates of publication 2021-05
    Size p. 192.
    Publishing place Springer International Publishing
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 120499-3
    ISSN 1573-2932 ; 0049-6979 ; 0043-1168
    ISSN (online) 1573-2932
    ISSN 0049-6979 ; 0043-1168
    DOI 10.1007/s11270-021-05122-2
    Database NAL-Catalogue (AGRICOLA)

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  4. Article: Removal of High Concentrations Decachlorobiphenyl of Earthworm Eisenia fetida and its Symbiotic Bacteria in a Vermicomposting System

    Zenteno-Rojas, Adalberto / Martinez-Romero, Esperanza / Rincón-Molina, Clara Ivette / Ruíz-Valdiviezo, Víctor Manuel / Meza-Gordillo, Rocío / Villalobos-Maldonado, Juan José / Rincón-Rosales, Reiner

    Water, air, and soil pollution. 2019 June, v. 230, no. 6

    2019  

    Abstract: The persistent organic pollutants decachlorobiphenyl (DCB) are a group of synthetic substances of high risk to human and environmental health. This study was aimed to evaluate the potential removal of DCB by earthworm Eisenia fetida and its symbiotic ... ...

    Abstract The persistent organic pollutants decachlorobiphenyl (DCB) are a group of synthetic substances of high risk to human and environmental health. This study was aimed to evaluate the potential removal of DCB by earthworm Eisenia fetida and its symbiotic bacteria in a vermicomposting system for a period of 72 days using a complete randomized design. The results showed that the vermicomposting system was able to significantly remove high concentrations decachlorobiphenyl (DCB) from the polluted substrate. The addition of a concentration of 1000 mg L−1 during vermicomposting were a removal of 230.28 mg L−1 DCB and the results obtained from adding a concentration of 1500 mg L−1 DCB were 424.11 mg L−1. The earthworms bioaccumulated less than 5 mg L−1 of DCB without an apparent toxic effect. The earthworm weight decreased during vermicomposting and DCB concentration compared to the control (non-polluting); however, earthworms survived until the end of experiment. Phylogenetic analysis of 16S rDNA gene sequences of Eisenia fetida gut strains grown in the presence of 1500 mg L−1 DCB were identified as Bacillus, Paenibacillus, Pseudomonas, Solibacillus, and Staphyloccocus at zero time (0-days). At 7 days of culture, the genera, Acinetobacter, Bacillus, Enterobacter, Klebsiella, and Staphylococcus were identified, and at 72 days, the symbiotic bacteria isolated were classified into the genera, Bacillus, Enterobacter, Klebsiella, and Staphylococcus. The strains Pseudomonas extremaustralis ADA-5 and Staphylococcus sciuri ADA-12 showed higher potential of removal from the DCB (219.7 and 162.74 mg L−1, respectively) at an initial concentration of 1500 mg L−1. Both vermicomposting system and degrading bacteria from Eisenia fetida worms are useful to remove high concentrations of decachlorobiphenyl from contaminated soils.
    Keywords Acinetobacter ; Eisenia fetida ; Enterobacter ; Klebsiella ; Paenibacillus ; Pseudomonas ; Staphylococcus sciuri ; bacteria ; digestive system ; earthworms ; environmental health ; humans ; microsymbionts ; nucleotide sequences ; persistent organic pollutants ; phylogeny ; polluted soils ; ribosomal DNA ; risk ; toxicity ; vermicomposting
    Language English
    Dates of publication 2019-06
    Size p. 116.
    Publishing place Springer International Publishing
    Document type Article
    ZDB-ID 120499-3
    ISSN 1573-2932 ; 0049-6979 ; 0043-1168
    ISSN (online) 1573-2932
    ISSN 0049-6979 ; 0043-1168
    DOI 10.1007/s11270-019-4170-5
    Database NAL-Catalogue (AGRICOLA)

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  5. Article: Rhizosphere and Endophytic Bacteria Associated to Ocimum basilicum L. with Decaclorobiphenyl Removal Potential

    Sánchez-Pérez, Blanca Nelly / Zenteno-Rojas, Adalberto / Rincón-Molina, Clara Ivette / Ruíz-Valdiviezo, Víctor Manuel / Gutiérrez-Miceli, Federico Antonio / Vences-Guzmán, Miguel Angel / Villalobos-Maldonado, Juan José / Rincón-Rosales, Reiner

    Water, air, and soil pollution. 2020 Mar., v. 231, no. 3

    2020  

    Abstract: Basil (Ocimum basilicum L.) is a hyperaccumulative herbaceous plant that has the ability to grow in contaminated soils and is believed to harbor a wide variety of bacterial species resistant to recalcitrant toxic chemical compounds. The objective of this ...

    Abstract Basil (Ocimum basilicum L.) is a hyperaccumulative herbaceous plant that has the ability to grow in contaminated soils and is believed to harbor a wide variety of bacterial species resistant to recalcitrant toxic chemical compounds. The objective of this work was to evaluate the potential for removal of decaclorobiphenyl PCB-209 by bacteria associated with the O. basilicum plant. A total of 34 endophytes and 52 strains from the rhizosphere of this plant were isolated using selective culture media. The adaptive capacity of the bacteria in phenol and Arochlor 1242 was initially determined and then a set of bacteria was selected and their removal potential of decachlorobiphenyl PCB-209 was evaluated. The phylogenetic analysis of 16S rRNA gene grouped to the O. basilicum isolates within bacterial genera Acinetobacter, Bacillus, Lysinibacillus, Novosphingobium, Pseudomonas, Rhizobium, Sphingobium, Stenotrophomonas, and Terribacillus as well as bacterial strains Pseudomonas taiwanensis BS-1, Rhizobium nepotum BS-2, Terribacillus sacharophilus BS-3, Stenotrophomonas rhizophila BS-4, Bacillus arybhattai BS-5, and Lysinibacillus macroides BS-6 showed the ability to adapt and use phenol and Arochlor 1242 as source of C. The strains BS-4 isolated from the root of the plant showed a higher potential from the removal of the PCB-209 (390.75 mg L−1) at an initial concentration of 500 mg L−1 and also had the ability to synthesize biosurfactant (EI = 60%) compared to the other strains evaluated. The diversity of bacteria associated to O. basilicum had biological qualities that may contribute to their adaptation and proliferation in an environment contaminated by PCB and be used efficiently as bioremediation to relieve agricultural soils contaminated by persistent organic compounds.
    Keywords Acinetobacter ; Bacillus (bacteria) ; Lysinibacillus ; Ocimum basilicum ; Pseudomonas ; Rhizobium ; Sphingomonas ; Stenotrophomonas ; agricultural soils ; bacteria ; basil ; bioremediation ; biosurfactants ; culture media ; endophytes ; genes ; herbaceous plants ; phenol ; phylogeny ; polluted soils ; polychlorinated biphenyls ; rhizosphere ; ribosomal DNA ; ribosomal RNA ; roots ; toxic substances
    Language English
    Dates of publication 2020-03
    Size p. 134.
    Publishing place Springer International Publishing
    Document type Article
    ZDB-ID 120499-3
    ISSN 1573-2932 ; 0049-6979 ; 0043-1168
    ISSN (online) 1573-2932
    ISSN 0049-6979 ; 0043-1168
    DOI 10.1007/s11270-020-04481-6
    Database NAL-Catalogue (AGRICOLA)

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  6. Article: Structure and diversity of native bacterial communities in soils contaminated with polychlorinated biphenyls.

    Zenteno-Rojas, Adalberto / Martínez-Romero, Esperanza / Castañeda-Valbuena, Daniel / Rincón-Molina, Clara Ivette / Ruíz-Valdiviezo, Víctor Manuel / Meza-Gordillo, Rocío / Villalobos-Maldonado, Juan José / Vences-Guzmán, Miguel Ángel / Rincón-Rosales, Reiner

    AMB Express

    2020  Volume 10, Issue 1, Page(s) 124

    Abstract: Persistent organic pollutants (POPs) such as polychlorinated biphenyls (PCBs) are a group of high-risk synthetic substances for human and environmental health. Currently, the study of sites contaminated by the spillage of equipment PCBs containing have ... ...

    Abstract Persistent organic pollutants (POPs) such as polychlorinated biphenyls (PCBs) are a group of high-risk synthetic substances for human and environmental health. Currently, the study of sites contaminated by the spillage of equipment PCBs containing have been considered targeted areas for the study of bacterial communities with potential for PCBs degradation. There in isolation of bacterial strains is vital for use in biodegradable processes, such as bacterial bioaugmentation, which accelerates the development of phenomena such as natural attenuation of contaminated sites. The objective of this study was to assess biodiversity of bacteria contained in anthropogenic contaminated soils (H
    Language English
    Publishing date 2020-07-10
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2621432-5
    ISSN 2191-0855
    ISSN 2191-0855
    DOI 10.1186/s13568-020-01058-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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