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  1. Article ; Online: Diversity of Yintiaoling Nature Reserve, China (Table of contents).

    Zhang, Zhi-Sheng / Zhang, Jia-Yong

    Zootaxa

    2023  Volume 5257, Issue 1, Page(s) 3–4

    Language English
    Publishing date 2023-03-24
    Publishing country New Zealand
    Document type Journal Article
    ISSN 1175-5334
    ISSN (online) 1175-5334
    DOI 10.11646/zootaxa.5257.1.2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Diversity of Yintiaoling Nature Reserve, China (Title page).

    Zhang, Zhi-Sheng / Zhang, Jia-Yong

    Zootaxa

    2023  Volume 5257, Issue 1, Page(s) 1–2

    MeSH term(s) Animals ; Ecosystem ; Conservation of Natural Resources ; China ; Biodiversity
    Language English
    Publishing date 2023-03-24
    Publishing country New Zealand
    Document type Journal Article
    ISSN 1175-5334
    ISSN (online) 1175-5334
    DOI 10.11646/zootaxa.5257.1.1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Phylogenetic relationships and divergence dating of Mantodea using mitochondrial phylogenomics

    Ma, Yue / Zhang, Le‐Ping / Lin, Yi‐Jie / Yu, Dan‐Na / Storey, K. B. / Zhang, Jia‐Yong

    Systematic Entomology. 2023 Oct., v. 48, no. 4 p.644-657

    2023  

    Abstract: Mantodea is a predatory insect group, its members occupying a diverse array of widely distributed habitats. Praying mantis species utilize hunting strategies including remarkable mimicry and unique camouflage for hiding from natural enemies while ... ...

    Abstract Mantodea is a predatory insect group, its members occupying a diverse array of widely distributed habitats. Praying mantis species utilize hunting strategies including remarkable mimicry and unique camouflage for hiding from natural enemies while catching their prey. The emergence of a “cyclopean ear” in mantises is thought to be a morphological innovation of the group, and an “arms race” with echolocating bats is one of the hypotheses put forward to account for the emergence of the mantis ear from a coevolutionary perspective. However, this hypothesis has not been rigorously tested because of a lack of robust higher‐level phylogeny and a detailed chronogram of Mantodea. Previous phylogenetic studies found an incongruence between traditional classification and molecular phylogenetics due to the convergent evolution of various ecomorphic strategies of the lineage. Here, we performed a comprehensive phylogenetic analysis of Mantodea based on data from 61 mitogenomes. Our analyses showed that the monophyly of Acanthopidae, Haaniidae, Nanomantidae, Miomantidae and Mantidea was supported. The newly updated Gonypetidae were paraphyletic, whereas Eremiaphilidae, Deroplatyidae and Toxoderidae were polyphyletic. Our molecular dating analyses inferred that Spinomantodea originated at ca. 149 Ma (Late Jurassic), whereas the origin of hearing mantises (Cernomantodea) was inferred as Early Cretaceous (119 Ma, 95% CI: 110–129 Ma). The molecular dating results indicated that the hearing organ in mantises did not arise in response to bat predation. Our study provides a robust framework for further evolutionary comparative studies of mantises.
    Keywords Early Cretaceous epoch ; Late Jurassic epoch ; Mantodea ; camouflage ; convergent evolution ; ears ; echolocation ; entomology ; mitochondria ; mitochondrial genome ; monophyly ; paraphyly ; polyphyly ; predation ; predatory insects
    Language English
    Dates of publication 2023-10
    Size p. 644-657.
    Publishing place Blackwell Publishing Ltd
    Document type Article ; Online
    Note JOURNAL ARTICLE
    ZDB-ID 223608-4
    ISSN 0307-6970
    ISSN 0307-6970
    DOI 10.1111/syen.12596
    Database NAL-Catalogue (AGRICOLA)

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    In stock of ZB MED Bonn / Germany

    Z 78/726: Show issues

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  4. Article ; Online: Novel gene rearrangements in mitochondrial genomes of four families of praying mantises (Insecta, Mantodea) and phylogenetic relationships of Mantodea

    Lin, Yi-Jie / Zhang, Li-Hua / Ma, Yue / Storey, K. B. / Yu, Dan-Na / Zhang, Jia-Yong

    Gene. 2023 Sept., v. 880 p.147603-

    2023  

    Abstract: The mitochondrial genome (mitogenome) plays an important role in phylogenetic studies of many species. The mitogenomes of many praying mantis groups have been well-studied, but mitogenomes of special mimic praying mantises, especially Acanthopoidea and ... ...

    Abstract The mitochondrial genome (mitogenome) plays an important role in phylogenetic studies of many species. The mitogenomes of many praying mantis groups have been well-studied, but mitogenomes of special mimic praying mantises, especially Acanthopoidea and Galinthiadoidea species, are still sorely lacking in the NCBI database. The present study analyzes five mitogenomes from four species of Acanthopoidea (Angela sp., Callibia diana, Coptopteryx sp., Raptrix fusca) and one of Galinthiadoidea (Galinthias amoena) that were sequenced by the primer-walking method. Among Angela sp. and Coptopteryx sp., three gene rearrangements were detected in ND3-A-R-N-S-E-F and COX1-L2-COX2 gene regions, two of which were novel. In addition, individual tandem repeats were found in control regions of four mitogenomes (Angela sp., C. diana, Coptopteryx sp., G. amoena). For those, plausible explanations were derived from the tandem duplication-random loss (TDRL) model and the slipped-strand mispairing model. One potential motif was found in Acanthopidae that was seen as a synapomorphy. Several conserved block sequences (CBSs) were detected within Acanthopoidea that paved the way for the design of specific primers. Via BI and ML analysis, based on four datasets (PCG12, PCG12R, PCG123, PCG123R), the merged phylogenetic tree within Mantodea was reconstructed. This showed that the monophyly of Acanthopoidea was supported and that the PCG12R dataset was the most suitable for reconstructing the phylogenetic tree within Mantodea.
    Keywords Mantodea ; data collection ; databases ; genes ; mitochondrial genome ; models ; monophyly ; synapomorphy ; Phylogenetic relationship ; Gene arrangement ; Acanthopoidea ; Mitogenome ; PCR ; NCBI ; bp ; PCGs ; CBSs ; TDRL ; NCRs ; CRs ; PP ; BS ; LBA ; BI ; ML
    Language English
    Dates of publication 2023-09
    Publishing place Elsevier B.V.
    Document type Article ; Online
    ZDB-ID 391792-7
    ISSN 1879-0038 ; 0378-1119
    ISSN (online) 1879-0038
    ISSN 0378-1119
    DOI 10.1016/j.gene.2023.147603
    Database NAL-Catalogue (AGRICOLA)

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    In stock of ZB MED Bonn / Germany

    Z 79/715: Show issues

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  5. Article ; Online: The Phylogenetic Relationship of Lamiinae (Coleoptera: Cerambycidae) Using Mitochondrial Genomes.

    Li, Ke / Yu, Sheng-Wu / Hu, Hao / Feng, Yu-Feng / Storey, Kenneth B / Ma, Yue / Zhang, Jia-Yong / Yu, Dan-Na

    Genes

    2023  Volume 15, Issue 1

    Abstract: Lamiinae is the largest subfamily of the Cerambycidae (longhorn beetles), with approximately 21,863 described species. Previous phylogenetic studies of Lamiinae showed that this subfamily was monophyletic, but the relationship between the tribes of ... ...

    Abstract Lamiinae is the largest subfamily of the Cerambycidae (longhorn beetles), with approximately 21,863 described species. Previous phylogenetic studies of Lamiinae showed that this subfamily was monophyletic, but the relationship between the tribes of Lamiinae is still controversial. Partial molecular data and species morphological characteristics are not sufficient to resolve species phylogenetic studies perfectly. At the same time, the full mitochondrial genome contains more comprehensive genetic data. Benefiting from the development of next-generation sequencing (NGS), mitochondrial genomes can be easily acquired and used as reliable molecular markers to investigate phylogenetic relationships within Cerambycidae. Using NGS technology, we obtained 11 mitochondrial genome sequences of Lamiinae species. Based on this newly generated mitochondrial genome dataset matrix, we reconstructed the phylogeny of Lamiinae. The Bayesian Inference and Maximum Likelihood analyses strongly support the monophyly of four tribes (Lamiini, Batocerini, Mesosini, and Saperdini), whereas the tribe Acanthocinini was identified as paraphyletic. Other mitochondrial structural features were also observed: the start codon in the nad1 gene of all 11 mitochondrial genomes is TTG; 17-22 bp intergenic spacers (IGS) with a 'TACTA' motif were found between
    MeSH term(s) Animals ; Phylogeny ; Genome, Mitochondrial ; Coleoptera/genetics ; Bayes Theorem ; Mitochondria/genetics
    Language English
    Publishing date 2023-12-20
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2527218-4
    ISSN 2073-4425 ; 2073-4425
    ISSN (online) 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes15010013
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Characterization of Two Mitogenomes of

    Hong, Yue-Huan / Huang, Hai-Ming / Wu, Lian / Storey, Kenneth B / Zhang, Jia-Yong / Zhang, Yong-Pu / Yu, Dan-Na

    Animals : an open access journal from MDPI

    2023  Volume 13, Issue 10

    Abstract: ... Hyla ... ...

    Abstract Hyla sanchiangensis
    Language English
    Publishing date 2023-05-10
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2606558-7
    ISSN 2076-2615
    ISSN 2076-2615
    DOI 10.3390/ani13101593
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Two-Fold

    Cai, Ling-Na / Zhang, Li-Hua / Lin, Yi-Jie / Wang, Jing-Yan / Storey, Kenneth B / Zhang, Jia-Yong / Yu, Dan-Na

    Animals : an open access journal from MDPI

    2023  Volume 13, Issue 18

    Abstract: In prior research on the mitochondrial genome (mitogenome) ... ...

    Abstract In prior research on the mitochondrial genome (mitogenome) of
    Language English
    Publishing date 2023-09-08
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2606558-7
    ISSN 2076-2615
    ISSN 2076-2615
    DOI 10.3390/ani13182857
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: How Does Mitochondrial Protein-Coding Gene Expression in

    Wang, Jing-Yan / Zhang, Li-Hua / Hong, Yue-Huan / Cai, Ling-Na / Storey, Kenneth B / Zhang, Jia-Yong / Zhang, Shu-Sheng / Yu, Dan-Na

    Animals : an open access journal from MDPI

    2023  Volume 13, Issue 19

    Abstract: Unusual climates can lead to extreme temperatures. ...

    Abstract Unusual climates can lead to extreme temperatures.
    Language English
    Publishing date 2023-09-25
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2606558-7
    ISSN 2076-2615
    ISSN 2076-2615
    DOI 10.3390/ani13193015
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Novel gene rearrangements in mitochondrial genomes of four families of praying mantises (Insecta, Mantodea) and phylogenetic relationships of Mantodea.

    Lin, Yi-Jie / Zhang, Li-Hua / Ma, Yue / Storey, Kenneth B / Yu, Dan-Na / Zhang, Jia-Yong

    Gene

    2023  Volume 880, Page(s) 147603

    Abstract: The mitochondrial genome (mitogenome) plays an important role in phylogenetic studies of many species. The mitogenomes of many praying mantis groups have been well-studied, but mitogenomes of special mimic praying mantises, especially Acanthopoidea and ... ...

    Abstract The mitochondrial genome (mitogenome) plays an important role in phylogenetic studies of many species. The mitogenomes of many praying mantis groups have been well-studied, but mitogenomes of special mimic praying mantises, especially Acanthopoidea and Galinthiadoidea species, are still sorely lacking in the NCBI database. The present study analyzes five mitogenomes from four species of Acanthopoidea (Angela sp., Callibia diana, Coptopteryx sp., Raptrix fusca) and one of Galinthiadoidea (Galinthias amoena) that were sequenced by the primer-walking method. Among Angela sp. and Coptopteryx sp., three gene rearrangements were detected in ND3-A-R-N-S-E-F and COX1-L2-COX2 gene regions, two of which were novel. In addition, individual tandem repeats were found in control regions of four mitogenomes (Angela sp., C. diana, Coptopteryx sp., G. amoena). For those, plausible explanations were derived from the tandem duplication-random loss (TDRL) model and the slipped-strand mispairing model. One potential motif was found in Acanthopidae that was seen as a synapomorphy. Several conserved block sequences (CBSs) were detected within Acanthopoidea that paved the way for the design of specific primers. Via BI and ML analysis, based on four datasets (PCG12, PCG12R, PCG123, PCG123R), the merged phylogenetic tree within Mantodea was reconstructed. This showed that the monophyly of Acanthopoidea was supported and that the PCG12R dataset was the most suitable for reconstructing the phylogenetic tree within Mantodea.
    MeSH term(s) Animals ; Mantodea/genetics ; Phylogeny ; Genome, Mitochondrial/genetics ; Insecta/genetics ; Gene Rearrangement
    Language English
    Publishing date 2023-07-06
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 391792-7
    ISSN 1879-0038 ; 0378-1119
    ISSN (online) 1879-0038
    ISSN 0378-1119
    DOI 10.1016/j.gene.2023.147603
    Database MEDical Literature Analysis and Retrieval System OnLINE

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    In stock of ZB MED Cologne/Königswinter

    Zs.A 1357: Show issues Location:
    Je nach Verfügbarkeit (siehe Angabe bei Bestand)
    bis Jg. 1994: Bestellungen von Artikeln über das Online-Bestellformular
    Jg. 1995 - 2021: Lesesall (1.OG)
    ab Jg. 2022: Lesesaal (EG)

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  10. Article ; Online: Characterization of Two Mitogenomes of Hyla sanchiangensis (Anura: Hylidae), with Phylogenetic Relationships and Selection Pressure Analyses of Hylidae

    Hong, Yue-Huan / Huang, Haiming / Wu, Lian / Storey, K. B. / Zhang, Jia-Yong / Zhang, Yong-Pu / Yu, Dan-Na

    Animals. 2023 May 10, v. 13, no. 10

    2023  

    Abstract: Hyla sanchiangensis (Anura: Hylidae) is endemic to China and is distributed across Anhui, Zhejiang, Fujian, Guangdong, Guangxi, Hunan, and Guizhou provinces. The mitogenomes of H. sanchiangensis from two different sites (Jinxiu, Guangxi, and Wencheng, ... ...

    Abstract Hyla sanchiangensis (Anura: Hylidae) is endemic to China and is distributed across Anhui, Zhejiang, Fujian, Guangdong, Guangxi, Hunan, and Guizhou provinces. The mitogenomes of H. sanchiangensis from two different sites (Jinxiu, Guangxi, and Wencheng, Zhejiang) were sequenced. Phylogenetic analyses were conducted, including 38 mitogenomes of Hylidae from the NCBI database, and assessed the phylogenetic relationship of H. sanchiangensis within the analyzed dataset. Two mitogenomes of H. sanchiangensis showed the typical mitochondrial gene arrangement with 13 protein-coding genes (PCGs), two ribosomal RNA genes (12S rRNA and 16S rRNA), 22 transfer RNA (tRNA) genes, and one non-coding control region (D-loop). The lengths of the 12S rRNA and 16S rRNA genes from both samples (Jinxiu and Wencheng) were 933 bp and 1604 bp, respectively. The genetic distance (p-distance transformed into percent) on the basis of the mitogenomes (excluding the control region) of the two samples was calculated as 4.4%. Hyla sanchiangensis showed a close phylogenetic relationship with the clade of (H. annectans + H. tsinlingensis), which was supported by ML and BI analyses. In the branch-site model, five positive selection sites were found in the clade of Hyla and Dryophytes: Cytb protein (at position 316), ND3 protein (at position 85), and ND5 protein (at position 400) have one site, respectively, and two sites in ND4 protein (at positions 47 and 200). Based on the results, we hypothesized that the positive selection of Hyla and Dryophytes was due to their experience of cold stress in historical events, but more evidence is needed to support this conclusion.
    Keywords Dryophytes ; Hyla ; cold stress ; data collection ; databases ; genetic distance ; mitochondrial genes ; mitochondrial genome ; models ; phylogeny ; ribosomal RNA ; selection pressure ; transfer RNA ; China
    Language English
    Dates of publication 2023-0510
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article ; Online
    ZDB-ID 2606558-7
    ISSN 2076-2615
    ISSN 2076-2615
    DOI 10.3390/ani13101593
    Database NAL-Catalogue (AGRICOLA)

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