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  1. Article ; Online: Efficient Degradation of Rhodamine B with the BiOCl/Bi

    Qi, Shuyan / Guan, Ling / Zhang, Ruiyan / Wu, Shanqiang / Zhang, Kaiyao

    Langmuir : the ACS journal of surfaces and colloids

    2023  Volume 39, Issue 48, Page(s) 17146–17153

    Abstract: ... BiOCl/ ... ...

    Abstract BiOCl/Bi
    Language English
    Publishing date 2023-11-17
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2005937-1
    ISSN 1520-5827 ; 0743-7463
    ISSN (online) 1520-5827
    ISSN 0743-7463
    DOI 10.1021/acs.langmuir.3c02074
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: [Circular RNA ame_circ_000115 regulates expression of genes in larval gusts of

    Ye, Yaping / Wang, Jie / Zhang, Jiaxin / Zhang, Kaiyao / Gu, Xiaoyu / Yao, Yutong / Ren, Zhongmin / Zhang, Yang / Chen, Dafu / Guo, Rui

    Sheng wu gong cheng xue bao = Chinese journal of biotechnology

    2023  Volume 39, Issue 1, Page(s) 217–230

    Abstract: Circular RNAs (circRNAs) are a new class of non-coding RNAs, which have been confirmed to regulate insect gene expression and immune response through multiple manners such as competing endogenous RNA (ceRNA) regulatory network. Currently, function of ... ...

    Abstract Circular RNAs (circRNAs) are a new class of non-coding RNAs, which have been confirmed to regulate insect gene expression and immune response through multiple manners such as competing endogenous RNA (ceRNA) regulatory network. Currently, function of circRNA in honey bee immune response remains unclear. In this study, PCR and Sanger sequencing were performed to validate the back splicing (BS) site of ame_circ_000115 (in short ac115). RT-qPCR was used to detect the expression profile of ac115 in larval guts of
    MeSH term(s) Bees/genetics ; Animals ; Larva/genetics ; Larva/metabolism ; RNA, Circular/genetics ; RNA, Small Interfering/genetics ; MicroRNAs/genetics
    Chemical Substances RNA, Circular ; RNA, Small Interfering ; MicroRNAs
    Language Chinese
    Publishing date 2023-02-01
    Publishing country China
    Document type English Abstract ; Journal Article
    ZDB-ID 1042206-7
    ISSN 1872-2075 ; 1042-749X
    ISSN (online) 1872-2075
    ISSN 1042-749X
    DOI 10.13345/j.cjb.220459
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Recent Advances on Small-Molecule Bromodomain-Containing Histone Acetyltransferase Inhibitors.

    Liu, Mingxia / Zhang, Kaiyao / Li, Qinjue / Pang, Haiying / Pan, Zhaoping / Huang, Xiaowei / Wang, Lian / Wu, Fengbo / He, Gu

    Journal of medicinal chemistry

    2023  Volume 66, Issue 3, Page(s) 1678–1699

    Abstract: In recent years, substantial research has been conducted on molecular mechanisms and inhibitors targeting bromodomains (BRDs) and extra-terminal (BET) family proteins. On this basis, non-BET BRD is gradually becoming a research hot spot. BRDs are ... ...

    Abstract In recent years, substantial research has been conducted on molecular mechanisms and inhibitors targeting bromodomains (BRDs) and extra-terminal (BET) family proteins. On this basis, non-BET BRD is gradually becoming a research hot spot. BRDs are abundant in histone acetyltransferase (HAT)-associated activating transcription factors, and BRD-containing HATs have been linked to cancer, inflammation, and viral replication. Therefore, the development of BRD-containing HATs as chemical probes is useful for understanding the specific biological roles of BRDs in diseases and drug discovery. Several types of BRD-containing HATs, including CBP/P300, PCAF/GCN5, and TAF1, are discussed in this context in terms of their structures, functions, and small-molecule inhibitors. Additionally, progress in BRD inhibitors/chemical probes and proteolysis targeting chimeras in terms of drug design, biological activity, and disease application are summarized. These findings provide insights into the development of BRD inhibitors as potential drug candidates for various diseases.
    MeSH term(s) Humans ; Histone Acetyltransferases ; Protein Domains ; Proteins ; Neoplasms ; Drug Discovery
    Chemical Substances Histone Acetyltransferases (EC 2.3.1.48) ; Proteins
    Language English
    Publishing date 2023-01-25
    Publishing country United States
    Document type Journal Article ; Review ; Research Support, Non-U.S. Gov't
    ZDB-ID 218133-2
    ISSN 1520-4804 ; 0022-2623
    ISSN (online) 1520-4804
    ISSN 0022-2623
    DOI 10.1021/acs.jmedchem.2c01638
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection.

    Guo, Rui / Zhang, Kaiyao / Zang, He / Guo, Sijia / Liu, Xiaoyu / Jing, Xin / Song, Yuxuan / Li, Kunze / Wu, Ying / Jiang, Haibing / Fu, Zhongmin / Chen, Dafu

    Applied microbiology and biotechnology

    2024  Volume 108, Issue 1, Page(s) 261

    Abstract: Non-coding RNA (ncRNA) plays a vital part in the regulation of immune responses, growth, and development in plants and animals. Here, the identification, characteristic analysis, and molecular verification of circRNAs in Apis cerana cerana worker larval ... ...

    Abstract Non-coding RNA (ncRNA) plays a vital part in the regulation of immune responses, growth, and development in plants and animals. Here, the identification, characteristic analysis, and molecular verification of circRNAs in Apis cerana cerana worker larval guts were conducted, followed by in-depth investigation of the expression pattern of larval circRNAs during Ascosphaera apis infection and exploration of the potential regulatory part of differentially expressed circRNAs (DEcircRNAs) in host immune responses. A total of 3178 circRNAs in the larval guts of A. c. cerana were identified, with a length distribution ranging from 15 to 96,007 nt. Additionally, 155, 95, and 86 DEcircRNAs were identified in the in the 4-, 5-, and 6-day-old larval guts following A. apis infection. These DEcircRNAs were predicted to target 29, 25, and 18 parental genes relevant to 12, 20, and 17 GO terms as well as 144, 114, and 61 KEGG pathways, including 5 cellular and 4 humoral immune pathways. Complex competing endogenous RNA (ceRNA) regulatory networks were detected as being formed among DEcircRNAs, DEmiRNAs, and DEmRNAs. The target DEmRNAs were engaged in 36, 47, and 47 GO terms as well as 331, 332, and 331 pathways, including 6 cellular and 6 humoral immune pathways. Further, 19 DEcircRNAs, 5 DEmiRNAs, and 3 mRNAs were included in the sub-networks relative to 3 antioxidant enzymes. Finally, back-splicing sites within 15 circRNAs and the difference in the 15 DEcircRNAs' expression between uninoculated and A. apis-inoculated larval guts were confirmed based on molecular methods. These findings not only enrich our understanding of bee host-fungal pathogen interactions but also lay a foundation for illuminating the mechanism underlying the DEcircRNA-mediated immune defense of A. c. cerana larvae against A. apis invasion. KEY POINTS: • The expression pattern of circRNAs was altered in the A. cerana worker larval guts following A. apis infection. • Back-splicing sites within 15 A. cerana circRNAs were verified using molecular approaches. DEcircRNAs potentially modulated immune responses and antioxidant enzymes in A. apis-challenged host guts.
    MeSH term(s) Bees/genetics ; Animals ; Larva/microbiology ; RNA, Circular/genetics ; Antioxidants ; RNA/genetics ; Mycoses ; MicroRNAs/genetics
    Chemical Substances RNA, Circular ; Antioxidants ; RNA (63231-63-0) ; MicroRNAs
    Language English
    Publishing date 2024-03-13
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 392453-1
    ISSN 1432-0614 ; 0171-1741 ; 0175-7598
    ISSN (online) 1432-0614
    ISSN 0171-1741 ; 0175-7598
    DOI 10.1007/s00253-024-13102-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Associations of dichlorophenols, trichlorophenols, and ortho-phenylphenol with the risk and prognosis of diabetes and prediabetes: A population-based study.

    Ou, Jiayin / Xian, Ronghui / Li, Jiayu / Zhao, Jianhe / Zhang, Kaiyao / Mo, Peishan / Fang, Jiansong / Shen, Yue / Hu, Xiaoling / Fang, Shuhuan / Liu, Wei / Pan, Huafeng

    Ecotoxicology and environmental safety

    2024  Volume 277, Page(s) 116345

    Abstract: 2,4-dichlorophenol (2,4-DCP), 2,5-DCP, 2,4,5-trichlorophenol (2,4,5-TCP), 2,4,6-TCP, and ortho-phenylphenol (OPP) are widely present in the environment. However, their associations with risk and prognosis of diabetes and prediabetes remains unclear. We ... ...

    Abstract 2,4-dichlorophenol (2,4-DCP), 2,5-DCP, 2,4,5-trichlorophenol (2,4,5-TCP), 2,4,6-TCP, and ortho-phenylphenol (OPP) are widely present in the environment. However, their associations with risk and prognosis of diabetes and prediabetes remains unclear. We investigated the associations of these five phenols with the risk of diabetes and prediabetes, and with all-cause and cardiovascular disease (CVD) mortality, in adults with diabetes or prediabetes (n=6419). Information on diabetes and prediabetes indicators, and mortality data was collected from the National Health and Nutrition Examination Survey. Logistic and Cox regression models were used to explore the associations of the five phenols with risk and prognosis of diabetes and prediabetes. Participants in the highest urinary 2,4-DCP and 2,5-DCP tertiles had higher odds of diabetes [adjusted odds ratio (aOR), 1.34, 95 % confidence interval (CI): 1.10, 1.62; aOR, 1.29, 95 % CI: 1.07, 1.56, respectively] than those in the lowest tertiles. Participants with urinary OPP concentrations above the limit of detection (LOD), but below median had an aOR of 1.25 (95 % CI: 1.08, 1.46) for prediabetes compared to those with concentrations below the LOD. In adults with diabetes, the highest 2,4-DCP and 2,5-DCP tertiles were associated with all-cause mortality [adjusted hazard ratio (aHR), 1.49; 95 % CI: 1.08, 2.06; aHR, 1.49; 95 % CI: 1.08, 2.05, respectively] and CVD mortality (aHR, 2.58; 95 % CI: 1.33, 4.97; aHR, 1.96; 95 % CI: 1.06, 3.60, respectively) compared with the lowest tertiles. Compared with 2,4,5-TCP concentrations below the LOD, those above median were associated with all-cause mortality (aHR: 1.75; 95 % CI: 1.24, 2.48) and CVD mortality (aHR: 2.34; 95 % CI: 1.19, 4.63) in adults with prediabetes. Furthermore, the associations between these phenols and mortality were strengthened in some subgroups. Environmental exposure to 2,4-DCP, 2,5-DCP, 2,4,5-TCP, and OPP increases the risk or adverse prognosis of diabetes or prediabetes in adults in the US. Further studies are required to confirm these findings.
    Language English
    Publishing date 2024-04-22
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 436536-7
    ISSN 1090-2414 ; 0147-6513
    ISSN (online) 1090-2414
    ISSN 0147-6513
    DOI 10.1016/j.ecoenv.2024.116345
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Deciphering the CircRNA-Regulated Response of Western Honey Bee (

    Chen, Huazhi / Fan, Xiaoxue / Zhang, Wende / Ye, Yaping / Cai, Zongbing / Zhang, Kaiyao / Zhang, Kuihao / Fu, Zhongmin / Chen, Dafu / Guo, Rui

    Biology

    2022  Volume 11, Issue 9

    Abstract: Vairimorpha ... ...

    Abstract Vairimorpha ceranae
    Language English
    Publishing date 2022-08-29
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2661517-4
    ISSN 2079-7737
    ISSN 2079-7737
    DOI 10.3390/biology11091285
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: In-depth investigation of microRNA-mediated cross-kingdom regulation between Asian honey bee and microsporidian.

    Fan, Xiaoxue / Zhang, Wende / Zhang, Kaiyao / Zhang, Jiaxin / Long, Qi / Wu, Ying / Zhang, Kuihao / Zhu, Leran / Chen, Dafu / Guo, Rui

    Frontiers in microbiology

    2022  Volume 13, Page(s) 1003294

    Abstract: Asian honey ... ...

    Abstract Asian honey bee
    Language English
    Publishing date 2022-09-29
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2587354-4
    ISSN 1664-302X
    ISSN 1664-302X
    DOI 10.3389/fmicb.2022.1003294
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Deciphering the CircRNA-Regulated Response of Western Honey Bee (Apis mellifera) Workers to Microsporidian Invasion

    Chen, Huazhi / Fan, Xiaoxue / Zhang, Wende / Ye, Yaping / Cai, Zongbing / Zhang, Kaiyao / Zhang, Kuihao / Fu, Zhongmin / Chen, Dafu / Guo, Rui

    Biology. 2022 Aug. 29, v. 11, no. 9

    2022  

    Abstract: Vairimorpha ceranae is a widespread fungal parasite of adult honey bees that leads to a serious disease called nosemosis. Circular RNAs (circRNAs) are newly discovered non-coding RNAs (ncRNAs) that regulate biological processes such as immune defense and ...

    Abstract Vairimorpha ceranae is a widespread fungal parasite of adult honey bees that leads to a serious disease called nosemosis. Circular RNAs (circRNAs) are newly discovered non-coding RNAs (ncRNAs) that regulate biological processes such as immune defense and development. Here, 8199 and 8711 circRNAs were predicted from the midguts of Apis mellifera ligustica workers at 7 d (Am7T) and 10 d (Am10T) after inoculation (dpi) with V. ceranae spores. In combination with transcriptome data from corresponding uninoculated midguts (Am7CK and Am10CK), 4464 circRNAs were found to be shared by these four groups. Additionally, 16 circRNAs were highly conserved among A. m. ligustica, Apis cerana cerana, and Homo sapiens. In the Am7CK vs. Am7T (Am10CK vs. Am10T) comparison group, 168 (306) differentially expressed circRNAs (DEcircRNAs) were identified. RT-qPCR results showed that the expression trend of eight DEcircRNAs was consistent with that in the transcriptome datasets. The source genes of DEcircRNAs in Am7CK vs. Am7T (Am10CK vs. Am10T) were engaged in 27 (35) GO functional terms, including 1 (1) immunity-associated terms. Moreover, the aforementioned source genes were involved in three cellular immune-related pathways. Moreover, 86 (178) DEcircRNAs in workers’ midguts at 7 (10) dpi could interact with 75 (103) miRNAs, further targeting 215 (305) mRNAs. These targets were associated with cellular renewal, cellular structure, carbohydrate and energy metabolism, and cellular and humoral immunity. Findings in the present study unraveled the mechanism underlying circRNA-mediated immune responses of western honey bee workers to V. ceranae invasion, but also provided new insights into host–microsporidian interaction during nosemosis.
    Keywords Apis cerana ; Apis mellifera ligustica ; Vairimorpha ; adults ; carbohydrates ; cell structures ; data collection ; energy metabolism ; fungi ; honey ; honey bees ; humoral immunity ; immune response ; microRNA ; nosema disease ; parasites ; transcriptome
    Language English
    Dates of publication 2022-0829
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article
    ZDB-ID 2661517-4
    ISSN 2079-7737
    ISSN 2079-7737
    DOI 10.3390/biology11091285
    Database NAL-Catalogue (AGRICOLA)

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  9. Article: Effect of

    Zhang, Kaiyao / Fu, Zhongmin / Fan, Xiaoxue / Wang, Zixin / Wang, Siyi / Guo, Sijia / Gao, Xuze / Zhao, Haodong / Jing, Xin / Zou, Peiyuan / Li, Qiming / Chen, Mengjun / Chen, Dafu / Guo, Rui

    Antioxidants (Basel, Switzerland)

    2023  Volume 12, Issue 1

    Abstract: Ascosphaera apis infects exclusively bee larvae and causes chalkbrood, a lethal fungal disease that results in a sharp reduction in adult bees and colony productivity. However, little is known about the effect of A. apis infestation on the activities of ... ...

    Abstract Ascosphaera apis infects exclusively bee larvae and causes chalkbrood, a lethal fungal disease that results in a sharp reduction in adult bees and colony productivity. However, little is known about the effect of A. apis infestation on the activities of antioxidant enzymes in bee larvae. Here, A. apis spores were purified and used to inoculate Asian honey bee (Apis cerana) larvae, followed by the detection of the host survival rate and an evaluation of the activities of four major antioxidant enzymes. At 6 days after inoculation (dpi) with A. apis spores, obvious symptoms of chalkbrood disease similar to what occurs in Apis mellifera larvae were observed. PCR identification verified the A. apis infection of A. cerana larvae. Additionally, the survival rate of larvae inoculated with A. apis was high at 1−2 dpi, which sharply decreased to 4.16% at 4 dpi and which reached 0% at 5 dpi, whereas that of uninoculated larvae was always high at 1~8 dpi, with an average survival rate of 95.37%, indicating the negative impact of A. apis infection on larval survival. As compared with those in the corresponding uninoculated groups, the superoxide dismutase (SOD) and catalase (CAT) activities in the 5- and 6-day-old larval guts in the A. apis−inoculated groups were significantly decreased (p < 0.05) and the glutathione S-transferase (GST) activity in the 4- and 5-day-old larval guts was significantly increased (p < 0.05), which suggests that the inhibition of SOD and CAT activities and the activation of GST activity in the larval guts was caused by A. apis infestation. In comparison with that in the corresponding uninoculated groups, the polyphenol oxidase (PPO) activity was significantly increased (p < 0.05) in the 5-day-old larval gut but significantly reduced (p < 0.01) in the 6-day-old larval gut, indicating that the PPO activity in the larval guts was first enhanced and then suppressed. Our findings not only unravel the response of A. cerana larvae to A. apis infestation from a biochemical perspective but also offer a valuable insight into the interaction between Asian honey bee larvae and A. apis.
    Language English
    Publishing date 2023-01-16
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2704216-9
    ISSN 2076-3921
    ISSN 2076-3921
    DOI 10.3390/antiox12010206
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Targeting bromodomain-containing proteins: research advances of drug discovery.

    Pan, Zhaoping / Zhao, Yuxi / Wang, Xiaoyun / Xie, Xin / Liu, Mingxia / Zhang, Kaiyao / Wang, Lian / Bai, Ding / Foster, Leonard J / Shu, Rui / He, Gu

    Molecular biomedicine

    2023  Volume 4, Issue 1, Page(s) 13

    Abstract: Bromodomain (BD) is an evolutionarily conserved protein module found in 46 different BD-containing proteins (BCPs). BD acts as a specific reader for acetylated lysine residues (KAc) and serves an essential role in transcriptional regulation, chromatin ... ...

    Abstract Bromodomain (BD) is an evolutionarily conserved protein module found in 46 different BD-containing proteins (BCPs). BD acts as a specific reader for acetylated lysine residues (KAc) and serves an essential role in transcriptional regulation, chromatin remodeling, DNA damage repair, and cell proliferation. On the other hand, BCPs have been shown to be involved in the pathogenesis of a variety of diseases, including cancers, inflammation, cardiovascular diseases, and viral infections. Over the past decade, researchers have brought new therapeutic strategies to relevant diseases by inhibiting the activity or downregulating the expression of BCPs to interfere with the transcription of pathogenic genes. An increasing number of potent inhibitors and degraders of BCPs have been developed, some of which are already in clinical trials. In this paper, we provide a comprehensive review of recent advances in the study of drugs that inhibit or down-regulate BCPs, focusing on the development history, molecular structure, biological activity, interaction with BCPs and therapeutic potentials of these drugs. In addition, we discuss current challenges, issues to be addressed and future research directions for the development of BCPs inhibitors. Lessons learned from the successful or unsuccessful development experiences of these inhibitors or degraders will facilitate the further development of efficient, selective and less toxic inhibitors of BCPs and eventually achieve drug application in the clinic.
    Language English
    Publishing date 2023-05-05
    Publishing country Singapore
    Document type Journal Article ; Review
    ISSN 2662-8651
    ISSN (online) 2662-8651
    DOI 10.1186/s43556-023-00127-1
    Database MEDical Literature Analysis and Retrieval System OnLINE

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