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Article ; Online: A study of the influence of sports venues on the intra-city population layout based on multi-source data-Taking Xi'an city and Zhengzhou city as examples.

Zhang, Shulin / Zhang, Xuejie / Liu, Yang

2023 Volume 18, Issue 5, Page(s) e0285600

Abstract: Revealing the influence of sports sports venues on the population in the built-up areas of cities contributes to the high-quality development of cities and the well-being of people. This study applies kernel density estimation to characterize the ... ...

Abstract	Revealing the influence of sports sports venues on the population in the built-up areas of cities contributes to the high-quality development of cities and the well-being of people. This study applies kernel density estimation to characterize the distribution of sports venues using reclassified POI (Point of Information) data, visualizes the distribution of intra-city population using population raster data from the WorldPop database, and analyses the distribution of sports venues and the urban population in Xi'an and Zhengzhou cities in 2020 from both the general and local perspectives based on various regression methods, such as MGWR, GWR, and linear fitting. The results show that the distribution of sports venues in Xi'an and Zhengzhou cities in 2020 was a good indicator of the population. The spatial distribution of sports venues and the population within the cities have a centre-periphery structure. From the global perspective, the distribution of sports venues is positively correlated with the intra-city population, and the promoting effect is significant. From the local perspective, the effect is spatially heterogeneous. Finally, this study explores the rationality of the complex impact and indicates that the research methodology can provide a reliable reference for other cities.
MeSH term(s)	Humans ; Cities ; Urban Population ; Spatial Analysis ; Data Management ; China
Language	English
Publishing date	2023-05-11
Publishing country	United States
Document type	Journal Article
ZDB-ID	2267670-3
ISSN	1932-6203 ; 1932-6203
ISSN (online)	1932-6203
ISSN	1932-6203
DOI	10.1371/journal.pone.0285600
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: Effect of different straw retention techniques on soil microbial community structure in wheat-maize rotation system.

Zhang, Shulin / Li, Meng / Cui, Xinyue / Pan, Yuemin

Frontiers in microbiology

2023 Volume 13, Page(s) 1069458

Abstract: Rotational straw return technique is considered an effective measure for improving soil quality and maintaining soil microorganisms. However, there are few reports on the influence of wheat-maize crop rotation and straw-returning tillage on crop soil ... ...

Abstract	Rotational straw return technique is considered an effective measure for improving soil quality and maintaining soil microorganisms. However, there are few reports on the influence of wheat-maize crop rotation and straw-returning tillage on crop soil microbial communities in China. This study aimed to investigate how wheat or maize straw-incorporation practices affect bacterial and fungal communities under wheat-maize rotational farming practices. To clarify the effects of straw incorporation on microbial composition, microbial communities from soils subjected to different treatments were identified using high-throughput sequencing. Our results showed that, before corn planting, wheat and maize straw returning reduced bacterial density and increased their diversity but had no effect on fungal diversity. However, before wheat planting, returning wheat and corn stalks to the field increased the diversity of soil bacteria and fungi, whereas returning corn stalks to the field reduced the diversity of fungi and other microorganisms. Straw return significantly increased the relative abundance of Ascomycota in the first season and decreased it in the second season; however, in the second season, wheat straw return increased the relative abundance of
Language	English
Publishing date	2023-01-19
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2587354-4
ISSN	1664-302X
ISSN	1664-302X
DOI	10.3389/fmicb.2022.1069458
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Article ; Online: Ionic liquids assisted preparation of BiPO₄ photocatalyst with enhanced photocatalytic activity for tetracycline and rhodamine B removal

Jin, Xingyun / Zhong, Junbo / Zhang, Shulin

Environmental Technology. 2023 Aug. 11, v. 44, no. 18 p.2669-2678

2023

Abstract: In this work, BiPO₄ (BPO)-based photocatalyst was successfully synthesized by a conventional hydrothermal strategy using bismuth nitrate pentahydrate (Bi(NO₃)₃·5H₂O) and 1-ethyl-3-methylimidazolium dihydro phosphate ([EMIm]H₂PO₄). [EMIm]H₂PO₄ can serve ... ...

Abstract	In this work, BiPO₄ (BPO)-based photocatalyst was successfully synthesized by a conventional hydrothermal strategy using bismuth nitrate pentahydrate (Bi(NO₃)₃·5H₂O) and 1-ethyl-3-methylimidazolium dihydro phosphate ([EMIm]H₂PO₄). [EMIm]H₂PO₄ can serve as a phosphorus source and surfactant. Photocatalytic activities of the photocatalysts prepared were evaluated by the destruction of rhodamine B (RhB) and tetracycline (TC) under UV light irradiation, respectively. The results reveal that the sample (IL-BPO) synthesized with the assistance of ionic liquid exhibits enhanced photocatalytic activity in comparison with the reference BiPO₄. The significantly improved photocatalytic activity of IL-BPO can be mainly attributed to the boosted separation of photoinduced electron-hole pairs (e⁻/h⁺) and richer oxygen vacancies (OVs).
Keywords	bismuth ; environmental technology ; ionic liquids ; irradiation ; nitrates ; oxygen ; phosphates ; phosphorus ; photocatalysis ; photocatalysts ; rhodamines ; surfactants ; tetracycline ; ultraviolet radiation ; photocatalytic activity ; separation of carriers ; oxygen vacancies
Language	English
Dates of publication	2023-0811
Size	p. 2669-2678.
Publishing place	Taylor & Francis
Document type	Article ; Online
ISSN	1479-487X
DOI	10.1080/09593330.2022.2038277
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Revealing the degrading-possibility of methyl red by two azoreductases of Anoxybacillus sp. PDR2 based on molecular docking.

Zhang, Shulin / Feng, Linlin / Han, Yanyan / Xu, Zihang / Xu, Luhui / An, Xuejiao / Zhang, Qinghua

Chemosphere

2024 Volume 351, Page(s) 141173

Abstract: Azo dyes, as the most widely used synthetic dyes, are considered to be one of the culprits of water resources and environmental pollution. Anoxybacillus sp. PDR2 is a thermophilic bacterium with the ability to degrade azo dyes, whose genome contains two ... ...

Abstract	Azo dyes, as the most widely used synthetic dyes, are considered to be one of the culprits of water resources and environmental pollution. Anoxybacillus sp. PDR2 is a thermophilic bacterium with the ability to degrade azo dyes, whose genome contains two genes encoding azoreductases (named AzoPDR2-1 and AzoPDR2-2). In this study, through response surface methodology (RSM), when the initial pH, inoculation volume and Mg
MeSH term(s)	Molecular Docking Simulation ; NADH, NADPH Oxidoreductases/genetics ; NADH, NADPH Oxidoreductases/metabolism ; Anoxybacillus/metabolism ; NAD ; Chromatography, Liquid ; Tandem Mass Spectrometry ; Azo Compounds/chemistry ; Coloring Agents/metabolism ; Nitroreductases
Chemical Substances	methyl red (69083AX1ZX) ; NADH, NADPH Oxidoreductases (EC 1.6.-) ; azoreductase (EC 1.7.1.17) ; NAD (0U46U6E8UK) ; Azo Compounds ; Coloring Agents ; Nitroreductases (EC 1.7.-)
Language	English
Publishing date	2024-01-15
Publishing country	England
Document type	Journal Article
ZDB-ID	120089-6
ISSN	1879-1298 ; 0045-6535 ; 0366-7111
ISSN (online)	1879-1298
ISSN	0045-6535 ; 0366-7111
DOI	10.1016/j.chemosphere.2024.141173
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Article ; Online: Progress in polystyrene biodegradation by insect gut microbiota.

Xu, Luhui / Li, Zelin / Wang, Liuwei / Xu, Zihang / Zhang, Shulin / Zhang, Qinghua

World journal of microbiology & biotechnology

2024 Volume 40, Issue 5, Page(s) 143

Abstract: Polystyrene (PS) is frequently used in the plastics industry. However, its structural stability and difficulty to break down lead to an abundance of plastic waste in the environment, resulting in micro-nano plastics (MNPs). As MNPs are severe hazards to ... ...

Abstract	Polystyrene (PS) is frequently used in the plastics industry. However, its structural stability and difficulty to break down lead to an abundance of plastic waste in the environment, resulting in micro-nano plastics (MNPs). As MNPs are severe hazards to both human and environmental health, it is crucial to develop innovative treatment technologies to degrade plastic waste. The biodegradation of plastics by insect gut microorganisms has gained attention as it is environmentally friendly, efficient, and safe. However, our knowledge of the biodegradation of PS is still limited. This review summarizes recent research advances on PS biodegradation by gut microorganisms/enzymes from insect larvae of different species, and schematic pathways of the degradation process are discussed in depth. Additionally, the prospect of using modern biotechnology, such as genetic engineering and systems biology, to identify novel PS-degrading microbes/functional genes/enzymes and to realize new strategies for PS biodegradation is highlighted. Challenges and limitations faced by the application of genetically engineered microorganisms (GEMs) and multiomics technologies in the field of plastic pollution bioremediation are also discussed. This review encourages the further exploration of the biodegradation of PS by insect gut microbes/enzymes, offering a cutting-edge perspective to identify PS biodegradation pathways and create effective biodegradation strategies.
MeSH term(s)	Animals ; Humans ; Polystyrenes/metabolism ; Gastrointestinal Microbiome ; Plastics ; Biodegradation, Environmental ; Insecta
Chemical Substances	Polystyrenes ; Plastics
Language	English
Publishing date	2024-03-26
Publishing country	Germany
Document type	Journal Article ; Review
ZDB-ID	1499109-3
ISSN	1573-0972 ; 0959-3993
ISSN (online)	1573-0972
ISSN	0959-3993
DOI	10.1007/s11274-024-03932-0
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Article ; Online: Integration of proteome and metabolome profiling to reveal heat stress response and tolerance mechanisms of Serratia sp. AXJ-M for the bioremediation of papermaking black liquor.

An, Xuejiao / Li, Ningjian / Zhang, Shulin / Han, Yanyan / Zhang, Qinghua

Journal of hazardous materials

2023 Volume 450, Page(s) 131092

Abstract: The use of thermophilic bacteria for treating paper black liquor seems to be an efficient bioremediation strategy. In our previous work, the lignin-degrading bacterium Serratia sp. AXJ-M exhibited excellent heat tolerance ability. However, the molecular ... ...

Abstract	The use of thermophilic bacteria for treating paper black liquor seems to be an efficient bioremediation strategy. In our previous work, the lignin-degrading bacterium Serratia sp. AXJ-M exhibited excellent heat tolerance ability. However, the molecular mechanism of its response to heat stress is unknown. Therefore, the heat stress response of AXJ-M was investigated using morphological and analytical methods. A comparative genomics analysis revealed interesting insights into the adaptability of the genetic basis of AXJ-M to harsh environments. Moreover, TMT quantitative proteomic analysis and parallel reaction monitoring (PRM) assays revealed that proteins related to both component systems, ABC transporters, carbohydrate, and amino metabolism, energy metabolism, etc., were differentially expressed. The non-targeted metabolome analysis revealed that the metabolic pathways associated with the fatty acid and amino acid biosynthesis and metabolism, together with the TCA cycle were most significantly enriched. Furthermore, integrated omics suggested that AXJ-M made metabolic adaptations to compensate for the increased energy demand caused by adverse environmental stimuli. The dominant heat regulator HspQ mediated heat adaptation of AXJ-M at high temperatures and modulated DyP expression. To summarize, the present study sheds light on the effect of high temperature on the lignin-degrading bacterium and its tolerance and underlying regulatory mechanisms.
MeSH term(s)	Proteome/metabolism ; Serratia/metabolism ; Biodegradation, Environmental ; Proteomics/methods ; Lignin/metabolism ; Heat-Shock Response/genetics ; Metabolome
Chemical Substances	Proteome ; Lignin (9005-53-2)
Language	English
Publishing date	2023-02-26
Publishing country	Netherlands
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	1491302-1
ISSN	1873-3336 ; 0304-3894
ISSN (online)	1873-3336
ISSN	0304-3894
DOI	10.1016/j.jhazmat.2023.131092
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Article ; Online: Ionic liquids assisted preparation of BiPO

Jin, Xingyun / Zhong, Junbo / Zhang, Shulin

Environmental technology

2022 Volume 44, Issue 18, Page(s) 2669–2678

Abstract: In this work, ... ...

Abstract	In this work, BiPO
MeSH term(s)	Anti-Bacterial Agents ; Catalysis ; Ionic Liquids ; Phosphates ; Photochemical Processes ; Tetracycline ; Rhodamines
Chemical Substances	Anti-Bacterial Agents ; Ionic Liquids ; Phosphates ; rhodamine B (K7G5SCF8IL) ; Tetracycline (F8VB5M810T) ; Rhodamines
Language	English
Publishing date	2022-02-15
Publishing country	England
Document type	Journal Article
ISSN	1479-487X
ISSN (online)	1479-487X
DOI	10.1080/09593330.2022.2038277
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Familial 4p Interstitial Deletion Provides New Insights and Candidate Genes Underlying This Rare Condition

Di, Jing / Yenwongfai, Leonard / Rieger, Hillary T. / Zhang, Shulin / Wei, Sainan

Genes (Basel). 2023 Mar. 03, v. 14, no. 3

2023

Abstract: Chromosome 4p deletions can lead to two distinct phenotypic outcomes: Wolf-–Hirschhorn syndrome (a terminal deletion at 4p16.3) and less frequently reported proximal interstitial deletions (4p11-p16). Proximal 4p interstitial deletions can result in mild ...

Abstract	Chromosome 4p deletions can lead to two distinct phenotypic outcomes: Wolf-–Hirschhorn syndrome (a terminal deletion at 4p16.3) and less frequently reported proximal interstitial deletions (4p11-p16). Proximal 4p interstitial deletions can result in mild to moderate intellectual disability, facial dysmorphisms, and a tall thin body habitus. To date, only 35 cases of proximal 4p interstitial deletions have been reported, and only two of these cases have been familial. The critical region for this syndrome has been narrowed down to 4p15.33-15.2, but the underlying causative genes remain unclear. In this study, we report the case of a 3-year-old female with failure to thrive, developmental and motor delays, and morphological features. The mother also had a 4p15.2-p14 deletion, and the proband was found to have a 13.4-Mb 4p15.2-p14 deletion by chromosome microarray analysis. The deleted region encompasses 16 genes, five of which have a high likelihood of contributing to the phenotype: PPARGC1A, DHX15, RBPJ, STIM2, and PCDH7. These findings suggest that multiple genes are involved in this rare proximal 4p interstitial deletion syndrome. This case highlights the need for healthcare providers to be aware of proximal 4p interstitial deletions and the potential phenotypic manifestations.
Keywords	chromosomes ; failure to thrive ; females ; health services ; microarray technology ; phenotype
Language	English
Dates of publication	2023-0303
Publishing place	Multidisciplinary Digital Publishing Institute
Document type	Article ; Online
ZDB-ID	2527218-4
ISSN	2073-4425
ISSN	2073-4425
DOI	10.3390/genes14030635
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Article: Integrated analysis of mRNA and microRNA expression profiles in hepatopancreas of

Zhang, Dajuan / Huang, Lanying / Jia, Yingxuan / Zhang, Shulin / Bi, Xiandong / Dai, Wei

Frontiers in genetics

2023 Volume 14, Page(s) 1088191

Abstract: Intensive shrimp farming is often threatened by microcystins Hepatopancreas is the primary target organ of MCs in shrimp. To investigate the response of hepatopancreas to acute MC-LR exposure, the expression profiles of RNA-seq and miRNA-seq in the ... ...

Abstract	Intensive shrimp farming is often threatened by microcystins Hepatopancreas is the primary target organ of MCs in shrimp. To investigate the response of hepatopancreas to acute MC-LR exposure, the expression profiles of RNA-seq and miRNA-seq in the hepatopancreas of
Language	English
Publishing date	2023-01-19
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2606823-0
ISSN	1664-8021
ISSN	1664-8021
DOI	10.3389/fgene.2023.1088191
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Article ; Online: Familial 4p Interstitial Deletion Provides New Insights and Candidate Genes Underlying This Rare Condition.

Di, Jing / Yenwongfai, Leonard / Rieger, Hillary T / Zhang, Shulin / Wei, Sainan

Genes

2023 Volume 14, Issue 3

Abstract: Chromosome 4p deletions can lead to two distinct phenotypic outcomes: Wolf--Hirschhorn syndrome (a terminal deletion at 4p16.3) and less frequently reported proximal interstitial deletions (4p11-p16). Proximal 4p interstitial deletions can result in mild ...

Abstract	Chromosome 4p deletions can lead to two distinct phenotypic outcomes: Wolf--Hirschhorn syndrome (a terminal deletion at 4p16.3) and less frequently reported proximal interstitial deletions (4p11-p16). Proximal 4p interstitial deletions can result in mild to moderate intellectual disability, facial dysmorphisms, and a tall thin body habitus. To date, only 35 cases of proximal 4p interstitial deletions have been reported, and only two of these cases have been familial. The critical region for this syndrome has been narrowed down to 4p15.33-15.2, but the underlying causative genes remain unclear. In this study, we report the case of a 3-year-old female with failure to thrive, developmental and motor delays, and morphological features. The mother also had a 4p15.2-p14 deletion, and the proband was found to have a 13.4-Mb 4p15.2-p14 deletion by chromosome microarray analysis. The deleted region encompasses 16 genes, five of which have a high likelihood of contributing to the phenotype:
MeSH term(s)	Humans ; Female ; Child, Preschool ; Chromosome Deletion ; Chromosomes, Human, Pair 4 ; Chromosome Disorders/genetics ; Phenotype ; Movement Disorders/genetics
Language	English
Publishing date	2023-03-03
Publishing country	Switzerland
Document type	Case Reports
ZDB-ID	2527218-4
ISSN	2073-4425 ; 2073-4425
ISSN (online)	2073-4425
ISSN	2073-4425
DOI	10.3390/genes14030635
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