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Article: Subsets of Cytokines and Chemokines from DENV-4-Infected Patients Could Regulate the Endothelial Integrity of Cultured Microvascular Endothelial Cells.

Cipitelli, Marcio da Costa / Paiva, Iury Amancio / Badolato-Corrêa, Jéssica / Marinho, Cíntia Ferreira / Fiestas Solórzano, Victor Edgar / da Costa Faria, Nieli Rodrigues / de Azeredo, Elzinandes Leal / de Souza, Luiz José / da Cunha, Rivaldo Venâncio / de-Oliveira-Pinto, Luzia Maria

Pathogens (Basel, Switzerland)

2022 Volume 11, Issue 5

Abstract: Introduction: ...

Abstract	Introduction:
Language	English
Publishing date	2022-04-26
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2695572-6
ISSN	2076-0817
ISSN	2076-0817
DOI	10.3390/pathogens11050509
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Plasma lipidome profiling of newborns with antenatal exposure to Zika virus.

da Costa Faria, Nieli Rodrigues / Chaves-Filho, Adriano Britto / Alcantara, Luiz Carlos Junior / de Siqueira, Isadora Cristina / Calcagno, Juan Ignacio / Miyamoto, Sayuri / de Filippis, Ana Maria Bispo / Yoshinaga, Marcos Yukio

PLoS neglected tropical diseases

2021 Volume 15, Issue 4, Page(s) e0009388

Abstract: The 2015-2016 Zika virus (ZIKV) outbreak in Brazil was remarkably linked to the incidence of microcephaly and other deleterious clinical manifestations, including eye abnormalities, in newborns. It is known that ZIKV targets the placenta, triggering an ... ...

Abstract	The 2015-2016 Zika virus (ZIKV) outbreak in Brazil was remarkably linked to the incidence of microcephaly and other deleterious clinical manifestations, including eye abnormalities, in newborns. It is known that ZIKV targets the placenta, triggering an inflammatory profile that may cause placental insufficiency. Transplacental lipid transport is delicately regulated during pregnancy and deficiency on the delivery of lipids such as arachidonic and docosahexaenoic acids may lead to deficits in both brain and retina during fetal development. Here, plasma lipidome profiles of ZIKV exposed microcephalic and normocephalic newborns were compared to non-infected controls. Our results reveal major alterations in circulating lipids from both ZIKV exposed newborns with and without microcephaly relative to controls. In newborns with microcephaly, the plasma concentrations of hydroxyoctadecadienoic acid (HODE), primarily as 13-HODE isomer, derived from linoleic acid were higher as compared to normocephalic ZIKV exposed newborns and controls. Total HODE concentrations were also positively associated with levels of other oxidized lipids and several circulating free fatty acids in newborns, indicating a possible plasma lipidome signature of microcephaly. Moreover, higher concentrations of lysophosphatidylcholine in ZIKV exposed normocephalic newborns relative to controls suggest a potential disruption of polyunsaturated fatty acids transport across the blood-brain barrier of fetuses. The latter data is particularly important given the neurocognitive and neurodevelopmental abnormalities observed in follow-up studies involving children with antenatal ZIKV exposure, but normocephalic at birth. Taken together, our data reveal that plasma lipidome alterations associated with antenatal exposure to ZIKV could contribute to identification and monitoring of the wide spectrum of clinical phenotypes at birth and further, during childhood.
Language	English
Publishing date	2021-04-30
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2429704-5
ISSN	1935-2735 ; 1935-2727
ISSN (online)	1935-2735
ISSN	1935-2727
DOI	10.1371/journal.pntd.0009388
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Different Profiles of Cytokines, Chemokines and Coagulation Mediators Associated with Severity in Brazilian Patients Infected with Dengue Virus.

Fiestas Solórzano, Victor Edgar / da Costa Faria, Nieli Rodrigues / Dos Santos, Caroline Fernandes / Corrêa, Gladys / Cipitelli, Márcio da Costa / Dornelas Ribeiro, Marcos / de Souza, Luiz José / Damasco, Paulo Vieira / da Cunha, Rivaldo Venâncio / Dos Santos, Flavia Barreto / de Oliveira Pinto, Luzia Maria / de Azeredo, Elzinandes Leal

Viruses

2021 Volume 13, Issue 9

Abstract: The incidence of dengue in Latin America has increased dramatically during the last decade. Understanding the pathogenic mechanisms in dengue is crucial for the identification of biomarkers for the triage of patients. We aimed to characterize the profile ...

Abstract	The incidence of dengue in Latin America has increased dramatically during the last decade. Understanding the pathogenic mechanisms in dengue is crucial for the identification of biomarkers for the triage of patients. We aimed to characterize the profile of cytokines (IFN-γ, TNF-α, IL-1β, IL-6, IL-18 and IL-10), chemokines (CXCL8/IL-8, CCL2/MCP-1 and CXCL10/IP-10) and coagulation mediators (Fibrinogen, D-dimer, Tissue factor-TF, Tissue factor pathway inhibitor-TFPI and Thrombomodulin) during the dengue-4 epidemic in Brazil. Laboratory-confirmed dengue cases had higher levels of TNF-α (
MeSH term(s)	Adult ; Biomarkers/blood ; Blood Coagulation Factors/classification ; Blood Coagulation Factors/immunology ; Brazil ; Chemokines/blood ; Chemokines/classification ; Chemokines/immunology ; Cytokines/blood ; Cytokines/classification ; Cytokines/immunology ; Dengue/blood ; Dengue/immunology ; Dengue Virus/immunology ; Female ; Humans ; Inflammation ; Male ; Middle Aged ; Severity of Illness Index
Chemical Substances	Biomarkers ; Blood Coagulation Factors ; Chemokines ; Cytokines
Language	English
Publishing date	2021-09-08
Publishing country	Switzerland
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2516098-9
ISSN	1999-4915 ; 1999-4915
ISSN (online)	1999-4915
ISSN	1999-4915
DOI	10.3390/v13091789
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Article: Different Profiles of Cytokines, Chemokines and Coagulation Mediators Associated with Severity in Brazilian Patients Infected with Dengue Virus

Fiestas Solórzano, Victor Edgar / da Costa Faria, Nieli Rodrigues / dos Santos, Caroline Fernandes / Corrêa, Gladys / Cipitelli, Márcio da Costa / Dornelas Ribeiro, Marcos / de Souza, Luiz José / Damasco, Paulo Vieira / da Cunha, Rivaldo Venâncio / dos Santos, Flavia Barreto / de Oliveira Pinto, Luzia Maria / de Azeredo, Elzinandes Leal

Viruses. 2021 Sept. 08, v. 13, no. 9

2021

Abstract	The incidence of dengue in Latin America has increased dramatically during the last decade. Understanding the pathogenic mechanisms in dengue is crucial for the identification of biomarkers for the triage of patients. We aimed to characterize the profile of cytokines (IFN-γ, TNF-α, IL-1β, IL-6, IL-18 and IL-10), chemokines (CXCL8/IL-8, CCL2/MCP-1 and CXCL10/IP-10) and coagulation mediators (Fibrinogen, D-dimer, Tissue factor-TF, Tissue factor pathway inhibitor-TFPI and Thrombomodulin) during the dengue-4 epidemic in Brazil. Laboratory-confirmed dengue cases had higher levels of TNF-α (p < 0.001), IL-6 (p = 0.005), IL-10 (p < 0.001), IL-18 (p = 0.001), CXCL8/IL-8 (p < 0.001), CCL2/MCP-1 (p < 0.001), CXCL10/IP-10 (p = 0.001), fibrinogen (p = 0.037), D-dimer (p = 0.01) and TFPI (p = 0.042) and lower levels of TF (p = 0.042) compared to healthy controls. A principal component analysis (PCA) distinguished between two profiles of mediators of inflammation and coagulation: protective (TNF-α, IL-1β and CXCL8/IL-8) and pathological (IL-6, TF and TFPI). Lastly, multivariate logistic regression analysis identified high aspartate aminotransferase-to-platelet ratio index (APRI) as independent risk factors associated with severity (adjusted OR: 1.33; 95% CI 1.03–1.71; p = 0.027), the area under the receiver operating characteristics curve (AUC) was 0.775 (95% CI 0.681–0.869) and an optimal cutoff value was 1.4 (sensitivity: 76%; specificity: 79%), so it could be a useful marker for the triage of patients attending primary care centers.
Keywords	Dengue virus ; aspartic acid ; biomarkers ; coagulation ; dengue ; fibrinogen ; inflammation ; interleukin-10 ; interleukin-18 ; interleukin-6 ; principal component analysis ; regression analysis ; Brazil ; Latin America
Language	English
Dates of publication	2021-0908
Publishing place	Multidisciplinary Digital Publishing Institute
Document type	Article
ZDB-ID	2516098-9
ISSN	1999-4915
ISSN	1999-4915
DOI	10.3390/v13091789
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: DENV-1 Genotype V in Brazil: Spatiotemporal dispersion pattern reveals continuous co-circulation of distinct lineages until 2016.

de Bruycker-Nogueira, Fernanda / Souza, Thiara Manuele Alves / Chouin-Carneiro, Thaís / da Costa Faria, Nieli Rodrigues / Santos, Jaqueline Bastos / Torres, Maria Celeste / Ramalho, Izabel Letícia Cavalcante / de Aguiar, Shirlei Ferreira / Nogueira, Rita Maria Ribeiro / de Filippis, Ana Maria Bispo / Dos Santos, Flavia Barreto

Scientific reports

2018 Volume 8, Issue 1, Page(s) 17160

Abstract: In Brazil, DENV-1 introduced in the 80's, remained the prevalent serotype from 2012 to 2016. After its re-emergence in the country in 2009, the co-circulation of different viral lineages was identified, however, its transmission dynamics afterwards, was ... ...

Abstract	In Brazil, DENV-1 introduced in the 80's, remained the prevalent serotype from 2012 to 2016. After its re-emergence in the country in 2009, the co-circulation of different viral lineages was identified, however, its transmission dynamics afterwards, was not fully characterized. In this study, we performed the continuous molecular surveillance after the reemergence period (2012 to 2016), covering the 30 years of circulation of DENV-1 in Brazil. Phylogenetic analysis allowed confirmation of the continued presence of genotype V, as well as three distinct co-circulating lineages. The molecular characterization of the E gene presented two new amino acid substitutions previously unidentified in the country. Phylogeographic analysis has shown that a large flow of migrations has occurred between Brazil and Argentina in the last 10 years.
MeSH term(s)	Brazil/epidemiology ; Dengue/epidemiology ; Dengue/virology ; Dengue Virus/classification ; Dengue Virus/genetics ; Dengue Virus/isolation & purification ; Epidemiological Monitoring ; Genotype ; Humans ; Molecular Epidemiology ; Phylogeny ; Sequence Analysis, DNA ; Serogroup ; Spatio-Temporal Analysis ; Viral Envelope Proteins/genetics
Chemical Substances	Viral Envelope Proteins
Language	English
Publishing date	2018-11-21
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2615211-3
ISSN	2045-2322 ; 2045-2322
ISSN (online)	2045-2322
ISSN	2045-2322
DOI	10.1038/s41598-018-35622-x
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: West Nile Virus in Brazil.

Costa, Érica Azevedo / Giovanetti, Marta / Silva Catenacci, Lilian / Fonseca, Vagner / Aburjaile, Flávia Figueira / Chalhoub, Flávia L L / Xavier, Joilson / Campos de Melo Iani, Felipe / da Cunha E Silva Vieira, Marcelo Adriano / Freitas Henriques, Danielle / Medeiros, Daniele Barbosa de Almeida / Guedes, Maria Isabel Maldonado Coelho / Senra Álvares da Silva Santos, Beatriz / Gonçalves Silva, Aila Solimar / de Pino Albuquerque Maranhão, Renata / da Costa Faria, Nieli Rodrigues / Farinelli de Siqueira, Renata / de Oliveira, Tulio / Ribeiro Leite Jardim Cavalcante, Karina /

Oliveira de Moura, Noely Fabiana / Pecego Martins Romano, Alessandro / Campelo de Albuquerque, Carlos F / Soares Feitosa, Lauro César / Martins Bayeux, José Joffre / Bertoni Cavalcanti Teixeira, Raffaella / Lisboa Lobato, Osmaikon / da Costa Silva, Silvokleio / Bispo de Filippis, Ana Maria / Venâncio da Cunha, Rivaldo / Lourenço, José / Alcantara, Luiz Carlos Junior

Pathogens (Basel, Switzerland)

2021 Volume 10, Issue 7

Abstract: Background: ...

Abstract	Background:
Language	English
Publishing date	2021-07-15
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2695572-6
ISSN	2076-0817
ISSN	2076-0817
DOI	10.3390/pathogens10070896
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Article ; Online: Analysis of Clinical and Laboratory Alterations Related to Dengue Case Severity: Comparison between Serotypes 2 and 4 in Brazil.

da Costa Faria, Nieli Rodrigues / Solorzano, Victor Edgar Fiestas / de Souza, Luiz José / Nogueira, Rita Maria Ribeiro / de Bruycker-Nogueira, Fernanda / Chouin-Carneiro, Thaís / Santos Simões, Jaqueline Bastos / da Rocha Queiroz Lima, Monique / de Oliveira Pinto, Luzia Maria / Kubelka, Claire Fernandes / Heringer, Manoela / de Azeredo, Elzinandes Leal / Barreto Dos Santos, Flavia

The American journal of tropical medicine and hygiene

2017 Volume 97, Issue 1, Page(s) 137–145

Abstract: The increase in severe dengue (SD) cases has caused great impact on public health and has concerned authorities of countries where the disease is endemic and epidemics reach high proportions. The recognition of progression signs of this severe disease ... ...

Abstract	The increase in severe dengue (SD) cases has caused great impact on public health and has concerned authorities of countries where the disease is endemic and epidemics reach high proportions. The recognition of progression signs of this severe disease during the initial febrile phase can be difficult, since the symptoms are often indistinguishable from other febrile diseases. The aim of this study was to evaluate the clinical manifestations and laboratory findings in patients from two dengue outbreaks and their association with the disease. The study was conducted in patients (
MeSH term(s)	Brazil/epidemiology ; Dengue/epidemiology ; Dengue/pathology ; Dengue/virology ; Dengue Virus/classification ; Dengue Virus/genetics ; Dengue Virus/pathogenicity ; Epidemics ; Humans ; Serogroup
Language	English
Publishing date	2017-07
Publishing country	United States
Document type	Journal Article
ZDB-ID	2942-7
ISSN	1476-1645 ; 0002-9637
ISSN (online)	1476-1645
ISSN	0002-9637
DOI	10.4269/ajtmh.16-0227
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Article: West Nile Virus in Brazil

Costa, Érica Azevedo / Giovanetti, Marta / Silva Catenacci, Lilian / Fonseca, Vagner / Aburjaile, Flávia Figueira / Chalhoub, Flávia L. L. / Xavier, Joilson / Campos de Melo Iani, Felipe / da Cunha e Silva Vieira, Marcelo Adriano / Freitas Henriques, Danielle / Medeiros, Daniele Barbosa de Almeida / Guedes, Maria Isabel Maldonado Coelho / Senra Álvares da Silva Santos, Beatriz / Gonçalves Silva, Aila Solimar / de Pino Albuquerque Maranhão, Renata / da Costa Faria, Nieli Rodrigues / Farinelli de Siqueira, Renata / de Oliveira, Tulio / Ribeiro Leite Jardim Cavalcante, Karina /

Oliveira de Moura, Noely Fabiana / Pecego Martins Romano, Alessandro / Campelo de Albuquerque, Carlos F. / Soares Feitosa, Lauro César / Martins Bayeux, José Joffre / Bertoni Cavalcanti Teixeira, Raffaella / Lisboa Lobato, Osmaikon / da Costa Silva, Silvokleio / Bispo de Filippis, Ana Maria / Venâncio da Cunha, Rivaldo / Lourenço, José / Alcantara, Luiz Carlos Junior

Pathogens. 2021 July 15, v. 10, no. 7

2021

Abstract: Background: West Nile virus (WNV) was first sequenced in Brazil in 2019, when it was isolated from a horse in the Espírito Santo state. Despite multiple studies reporting serological evidence suggestive of past circulation since 2004, WNV remains a low ... ...

Abstract	Background: West Nile virus (WNV) was first sequenced in Brazil in 2019, when it was isolated from a horse in the Espírito Santo state. Despite multiple studies reporting serological evidence suggestive of past circulation since 2004, WNV remains a low priority for surveillance and public health, such that much is still unknown about its genomic diversity, evolution, and transmission in the country. Methods: A combination of diagnostic assays, nanopore sequencing, phylogenetic inference, and epidemiological modeling are here used to provide a holistic overview of what is known about WNV in Brazil. Results: We report new genetic evidence of WNV circulation in southern (Minas Gerais, São Paulo) and northeastern (Piauí) states isolated from equine red blood cells. A novel, climate-informed theoretical perspective of the potential transmission of WNV across the country highlights the state of Piauí as particularly relevant for WNV epidemiology in Brazil, although it does not reject possible circulation in other states. Conclusion: Our output demonstrates the scarceness of existing data, and that although there is sufficient evidence for the circulation and persistence of the virus, much is still unknown on its local evolution, epidemiology, and activity. We advocate for a shift to active surveillance, to ensure adequate preparedness for future epidemics with spill-over potential to humans.
Keywords	West Nile virus ; genetic variation ; horses ; monitoring ; nanopores ; phylogeny ; public health ; viruses ; Brazil
Language	English
Dates of publication	2021-0715
Publishing place	Multidisciplinary Digital Publishing Institute
Document type	Article
ZDB-ID	2695572-6
ISSN	2076-0817
ISSN	2076-0817
DOI	10.3390/pathogens10070896
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Evaluation of a generic RT-nested-PCR for detection of flaviviruses in suspected fatal cases of dengue infection, Rio de Janeiro, Brazil.

de Araújo, Josélio Maria Galvão / Gomes, Gabriella Mello / da Costa Faria, Nieli Rodrigues / de Araújo, Eliane Saraiva Machado / de Filippis, Ana Maria Bispo / dos Santos, Flávia Barreto / Schatzmayr, Hermann Gonçalves / Nogueira, Rita Maria Ribeiro

Journal of virological methods

2012 Volume 186, Issue 1-2, Page(s) 167–170

Abstract: Flaviviruses are significant causes of disease worldwide and can be classified serologically into several antigenic complexes. The purpose of the present study was to evaluate the effectiveness of a generic RT-nested-PCR for detection of flavivirus ... ...

Abstract	Flaviviruses are significant causes of disease worldwide and can be classified serologically into several antigenic complexes. The purpose of the present study was to evaluate the effectiveness of a generic RT-nested-PCR for detection of flavivirus during a dengue outbreak in Brazil in 2008. A total of 105 serum samples were collected from patients with fatal outcome and examined by generic RT-PCR, conventional RT-PCR, and IgM serology. The generic RT-PCR confirmed 19 of 105 (18%) cases. Conventional RT-PCR performed on 105 serum samples detected 45 (42.8%) dengue virus infections. The IgM serology confirmed 44 of 102 (43.1%) cases. The infecting serotype was identified by generic RT-PCR in 19 cases (18 DENV-2 and 1 DENV-3) and by conventional RT-PCR in 45 cases (40 DENV-2 and 5 DENV-3). In addition, we analyzed the performance of the generic and conventional RT-PCRs and IgM serology on serum samples stratified by the day of onset of symptoms. Our results indicate that different methods should be included in flavivirus surveillance programs, including virological and serological approaches.
MeSH term(s)	Adolescent ; Adult ; Aged ; Aged, 80 and over ; Antibodies, Viral/blood ; Brazil/epidemiology ; Child ; Child, Preschool ; Dengue/diagnosis ; Dengue/epidemiology ; Dengue/virology ; Dengue Virus/classification ; Dengue Virus/genetics ; Dengue Virus/isolation & purification ; Disease Outbreaks ; Female ; Humans ; Immunoglobulin M/blood ; Infant ; Infant, Newborn ; Male ; Middle Aged ; Molecular Diagnostic Techniques/methods ; Polymerase Chain Reaction/methods ; Reverse Transcriptase Polymerase Chain Reaction/methods ; Serologic Tests/methods ; Virology/methods ; Young Adult
Chemical Substances	Antibodies, Viral ; Immunoglobulin M
Language	English
Publishing date	2012-12
Publishing country	Netherlands
Document type	Comparative Study ; Evaluation Studies ; Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	8013-5
ISSN	1879-0984 ; 0166-0934
ISSN (online)	1879-0984
ISSN	0166-0934
DOI	10.1016/j.jviromet.2012.08.010
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Article: Evaluation of a generic RT-nested-PCR for detection of flaviviruses in suspected fatal cases of dengue infection, Rio de Janeiro, Brazil

Journal of virological methods

Volume v. 186,, Issue no. 1

Abstract	Flaviviruses are significant causes of disease worldwide and can be classified serologically into several antigenic complexes. The purpose of the present study was to evaluate the effectiveness of a generic RT-nested-PCR for detection of flavivirus during a dengue outbreak in Brazil in 2008. A total of 105 serum samples were collected from patients with fatal outcome and examined by generic RT-PCR, conventional RT-PCR, and IgM serology. The generic RT-PCR confirmed 19 of 105 (18%) cases. Conventional RT-PCR performed on 105 serum samples detected 45 (42.8%) dengue virus infections. The IgM serology confirmed 44 of 102 (43.1%) cases. The infecting serotype was identified by generic RT-PCR in 19 cases (18 DENV-2 and 1 DENV-3) and by conventional RT-PCR in 45 cases (40 DENV-2 and 5 DENV-3). In addition, we analyzed the performance of the generic and conventional RT-PCRs and IgM serology on serum samples stratified by the day of onset of symptoms. Our results indicate that different methods should be included in flavivirus surveillance programs, including virological and serological approaches.
Keywords	blood serum ; immunoglobulin M ; patients ; monitoring ; serotypes ; dengue ; serology ; Flaviviridae ; reverse transcriptase polymerase chain reaction
Language	English
Document type	Article
ISSN	0166-0934
Database	AGRIS - International Information System for the Agricultural Sciences and Technology

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