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  1. AU="de Souza, Sibele Pinheiro"
  2. AU="Agnès Sartor"
  3. AU="Donda, Alena"
  4. AU="Park, B H"
  5. AU="Leishman, Stuart"
  6. AU="Somma McGivney, Melissa A"
  7. AU="Li, Zhongmei"
  8. AU="Tal Noy-Porat"
  9. AU="Via, Jeremy"
  10. AU="Farshad Moradi Kashkooli"
  11. AU="Doaa Ebrahim"
  12. AU="Rangarajan, Amith"
  13. AU="Alonso-Sánchez, Jesús"
  14. AU="Zhuo, J C"
  15. AU="Pazurek, Angelica" AU="Pazurek, Angelica"
  16. AU=Sundararaman T
  17. AU="Singla, Amit Kumar"
  18. AU="Shu, Ran"
  19. AU="Kim, Jiha"
  20. AU="MacDonald, Suzanne E."
  21. AU="Heather Limburg"
  22. AU="Gross, Boris"
  23. AU="Perkins, George H"
  24. AU="Jormanainen, J"
  25. AU="Pichardo-González, Priamo A"
  26. AU="Cannegieter, Suzanne"
  27. AU="Trocino, Giuseppe"
  28. AU="Emiliano, Thais Moura"
  29. AU=Sinelli Mariateresa
  30. AU="De-guo LÜ"
  31. AU="Benoit-Pilven, Clara"
  32. AU="Lanza, Stefania"
  33. AU="Chilingarian, A"
  34. AU="Baldovini, Nicolas"
  35. AU="López Rodríguez, David"
  36. AU="Alexander König"
  37. AU="Jakobsen, Henrik L"
  38. AU="Yong-Zhao Dai"
  39. AU="Tara L. Pukala"
  40. AU="Addo‐Danso, Shalom D."
  41. AU=Ficheux Q.
  42. AU="Tomoyo Sawada"
  43. AU="Mohammad Kawsar Sharif Siam"
  44. AU=Kushnareva Yulia
  45. AU="Canova, Christopher T"
  46. AU="Hasnaoui, Naoual"
  47. AU="Maradana, Jhansi"
  48. AU="Raggini, Elisa"
  49. AU="Baxter, A."
  50. AU="Jackson, Shirnae"
  51. AU="Schenzle, Lisa"
  52. AU="Veronica Phillips"
  53. AU="Braun, Jörg"
  54. AU="Cassandra E. Holbert"
  55. AU="Trevisan Alexandra"

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  1. Artikel ; Online: First detection and molecular diversity of Brazilian bovine torovirus (BToV) strains from young and adult cattle.

    Nogueira, Juliana Silva / Asano, Karen Miyuki / de Souza, Sibele Pinheiro / Brandão, Paulo Eduardo / Richtzenhain, Leonardo José

    Research in veterinary science

    2013  Band 95, Heft 2, Seite(n) 799–801

    Abstract: Bovine torovirus (BToV) is an established enteric pathogen of cattle, but its occurrence in Brazilian cattle had not been reported until now. This article describes a survey on BToV in Brazil carried out on 80 fecal samples from diarrheic young and adult ...

    Abstract Bovine torovirus (BToV) is an established enteric pathogen of cattle, but its occurrence in Brazilian cattle had not been reported until now. This article describes a survey on BToV in Brazil carried out on 80 fecal samples from diarrheic young and adult cattle, using a nested-RT-PCR targeting the nucleocapsid (N) gene. BToV was detected in 6.25% (5/80) of stool samples from three different geographic regions. Sequences analysis showed that Brazilian BToVs have a high degree of identity with European and Japanese BToVs and a lower degree of identity with North American Breda 1 strain. These results show that, albeit its low frequency and the scarce number of research on the field, BToV is still present amongst cattle populations.
    Mesh-Begriff(e) Animals ; Brazil/epidemiology ; Cattle ; Europe/epidemiology ; Genetic Variation ; Japan/epidemiology ; Phylogeny ; Torovirus/classification ; Torovirus/genetics ; Torovirus Infections/epidemiology ; Torovirus Infections/veterinary ; Torovirus Infections/virology
    Schlagwörter covid19
    Sprache Englisch
    Erscheinungsdatum 2013-05-03
    Erscheinungsland England
    Dokumenttyp Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 840961-4
    ISSN 1532-2661 ; 0034-5288
    ISSN (online) 1532-2661
    ISSN 0034-5288
    DOI 10.1016/j.rvsc.2013.04.006
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  2. Artikel ; Online: Molecular and phylogenetic analysis of bovine coronavirus based on the spike glycoprotein gene.

    Martínez, Nadia / Brandão, Paulo E / de Souza, Sibele Pinheiro / Barrera, Maritza / Santana, Nelson / de Arce, Heidy Díaz / Pérez, Lester J

    Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases

    2012  Band 12, Heft 8, Seite(n) 1870–1878

    Abstract: Bovine coronavirus has been associated with diarrhoea in newborn calves, winter dysentery in adult cattle and respiratory tract infections in calves and feedlot cattle. In Cuba, the presence of BCoV was first reported in 2006. Since then, sporadic ... ...

    Abstract Bovine coronavirus has been associated with diarrhoea in newborn calves, winter dysentery in adult cattle and respiratory tract infections in calves and feedlot cattle. In Cuba, the presence of BCoV was first reported in 2006. Since then, sporadic outbreaks have continued to occur. This study was aimed at deepening the knowledge of the evolution, molecular markers of virulence and epidemiology of BCoV in Cuba. A total of 30 samples collected between 2009 and 2011 were used for PCR amplification and direct sequencing of partial or full S gene. Sequence comparison and phylogenetic studies were conducted using partial or complete S gene sequences as phylogenetic markers. All Cuban bovine coronavirus sequences were located in a single cluster supported by 100% bootstrap and 1.00 posterior probability values. The Cuban bovine coronavirus sequences were also clustered with the USA BCoV strains corresponding to the GenBank accession numbers EF424621 and EF424623, suggesting a common origin for these viruses. This phylogenetic cluster was also the only group of sequences in which no recombination events were detected. Of the 45 amino acid changes found in the Cuban strains, four were unique.
    Mesh-Begriff(e) Amino Acid Sequence ; Animals ; Cattle ; Cattle Diseases/virology ; Cluster Analysis ; Coronavirus Infections/veterinary ; Coronavirus Infections/virology ; Coronavirus, Bovine/classification ; Coronavirus, Bovine/genetics ; Coronavirus, Bovine/isolation & purification ; Dysentery/veterinary ; Dysentery/virology ; Evolution, Molecular ; Feces/virology ; Membrane Glycoproteins/genetics ; Molecular Sequence Data ; Phylogeny ; Recombination, Genetic ; Sequence Alignment ; Sequence Analysis, DNA ; Spike Glycoprotein, Coronavirus ; Viral Envelope Proteins/genetics
    Chemische Substanzen Membrane Glycoproteins ; Spike Glycoprotein, Coronavirus ; Viral Envelope Proteins
    Schlagwörter covid19
    Sprache Englisch
    Erscheinungsdatum 2012-05-24
    Erscheinungsland Netherlands
    Dokumenttyp Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2037068-4
    ISSN 1567-7257 ; 1567-1348
    ISSN (online) 1567-7257
    ISSN 1567-1348
    DOI 10.1016/j.meegid.2012.05.007
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  3. Artikel: Molecular and phylogenetic analysis of bovine coronavirus based on the spike glycoprotein gene

    Martínez, Nadia / Brandão, Paulo E / de Souza, Sibele Pinheiro / Barrera, Maritza / Santana, Nelson / de Arce, Heidy Díaz / Pérez, Lester J

    Infection, genetics, and evolution. 2012 Dec., v. 12, no. 8

    2012  

    Abstract: Bovine coronavirus has been associated with diarrhoea in newborn calves, winter dysentery in adult cattle and respiratory tract infections in calves and feedlot cattle. In Cuba, the presence of BCoV was first reported in 2006. Since then, sporadic ... ...

    Abstract Bovine coronavirus has been associated with diarrhoea in newborn calves, winter dysentery in adult cattle and respiratory tract infections in calves and feedlot cattle. In Cuba, the presence of BCoV was first reported in 2006. Since then, sporadic outbreaks have continued to occur. This study was aimed at deepening the knowledge of the evolution, molecular markers of virulence and epidemiology of BCoV in Cuba. A total of 30 samples collected between 2009 and 2011 were used for PCR amplification and direct sequencing of partial or full S gene. Sequence comparison and phylogenetic studies were conducted using partial or complete S gene sequences as phylogenetic markers. All Cuban bovine coronavirus sequences were located in a single cluster supported by 100% bootstrap and 1.00 posterior probability values. The Cuban bovine coronavirus sequences were also clustered with the USA BCoV strains corresponding to the GenBank accession numbers EF424621 and EF424623, suggesting a common origin for these viruses. This phylogenetic cluster was also the only group of sequences in which no recombination events were detected. Of the 45 amino acid changes found in the Cuban strains, four were unique.
    Schlagwörter Bovine coronavirus ; adults ; amino acids ; calves ; dysentery ; feedlots ; genes ; genetic markers ; glycoproteins ; neonates ; nucleotide sequences ; phylogeny ; polymerase chain reaction ; probability ; respiratory tract diseases ; sequence analysis ; virulence ; viruses ; Cuba ; United States ; covid19
    Sprache Englisch
    Erscheinungsverlauf 2012-12
    Umfang p. 1870-1878.
    Erscheinungsort Elsevier B.V.
    Dokumenttyp Artikel
    ZDB-ID 2037068-4
    ISSN 1567-1348
    ISSN 1567-1348
    DOI 10.1016/j.meegid.2012.05.007
    Datenquelle NAL Katalog (AGRICOLA)

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  4. Artikel ; Online: Multiplex semi-nested RT-PCR with exogenous internal control for simultaneous detection of bovine coronavirus and group A rotavirus.

    Asano, Karen Miyuki / de Souza, Sibele Pinheiro / de Barros, Iracema Nunes / Ayres, Giselle Razera / Silva, Sheila Oliveira Souza / Richtzenhain, Leonardo José / Brandão, Paulo E

    Journal of virological methods

    2010  Band 169, Heft 2, Seite(n) 375–379

    Abstract: Neonatal calf diarrhea is a multi-etiology syndrome of cattle and direct detection of the two major agents of the syndrome, group A rotavirus and Bovine coronavirus (BCoV) is hampered by their fastidious growth in cell culture. This study aimed at ... ...

    Abstract Neonatal calf diarrhea is a multi-etiology syndrome of cattle and direct detection of the two major agents of the syndrome, group A rotavirus and Bovine coronavirus (BCoV) is hampered by their fastidious growth in cell culture. This study aimed at developing a multiplex semi-nested RT-PCR for simultaneous detection of BCoV (N gene) and group A rotavirus (VP1 gene) with the addition of an internal control (mRNA ND5). The assay was tested in 75 bovine feces samples tested previously for rotavirus using PAGE and for BCoV using nested RT-PCR targeted to RdRp gene. Agreement with reference tests was optimal for BCoV (kappa=0.833) and substantial for rotavirus detection (kappa=0.648). the internal control, ND5 mRNA, was detected successfully in all reactions. Results demonstrated that this multiplex semi-nested RT-PCR was effective in the detection of BCoV and rotavirus, with high sensitivity and specificity for simultaneous detection of both viruses at a lower cost, providing an important tool for studies on the etiology of diarrhea in cattle.
    Mesh-Begriff(e) Animals ; Cattle ; Cattle Diseases/diagnosis ; Cattle Diseases/virology ; Coronavirus Infections/diagnosis ; Coronavirus Infections/veterinary ; Coronavirus Infections/virology ; Coronavirus, Bovine/isolation & purification ; Feces/virology ; Molecular Sequence Data ; Polymerase Chain Reaction/methods ; RNA, Viral/genetics ; Reference Standards ; Reverse Transcriptase Polymerase Chain Reaction/methods ; Reverse Transcriptase Polymerase Chain Reaction/standards ; Rotavirus/isolation & purification ; Rotavirus Infections/diagnosis ; Rotavirus Infections/veterinary ; Rotavirus Infections/virology ; Sensitivity and Specificity ; Sequence Analysis, DNA
    Chemische Substanzen RNA, Viral
    Schlagwörter covid19
    Sprache Englisch
    Erscheinungsdatum 2010-08-17
    Erscheinungsland Netherlands
    Dokumenttyp Evaluation Study ; Journal Article
    ZDB-ID 8013-5
    ISSN 1879-0984 ; 0166-0934
    ISSN (online) 1879-0984
    ISSN 0166-0934
    DOI 10.1016/j.jviromet.2010.08.008
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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    Zs.A 1565: Hefte anzeigen Standort:
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  5. Artikel ; Online: Rabies virus in insectivorous bats: implications of the diversity of the nucleoprotein and glycoprotein genes for molecular epidemiology.

    Oliveira, Rafael de Novaes / de Souza, Sibele Pinheiro / Lobo, Renata Spinelli Vaz / Castilho, Juliana Galera / Macedo, Carla Isabel / Carnieli, Pedro / Fahl, Willian Oliveira / Achkar, Samira Maria / Scheffer, Karin Corrêa / Kotait, Ivanete / Carrieri, Maria Luiza / Brandão, Paulo Eduardo

    Virology

    2010  Band 405, Heft 2, Seite(n) 352–360

    Abstract: Insectivorous bats are the main reservoirs of rabies virus (RABV) in various regions of the world. The aims of this study were to (a) establish genealogies for RABV strains from different species of Brazilian insectivorous bats based on the nucleoprotein ...

    Abstract Insectivorous bats are the main reservoirs of rabies virus (RABV) in various regions of the world. The aims of this study were to (a) establish genealogies for RABV strains from different species of Brazilian insectivorous bats based on the nucleoprotein (N) and glycoprotein (G) genes, (b) investigate specific RABV lineages associated with certain genera of bats and (c) identify molecular markers that can distinguish between these lineages. The genealogic analysis of N and G from 57 RABV strains revealed seven genus-specific clusters related to the insectivorous bats Myotis, Eptesicus, Nyctinomops, Molossus, Tadarida, Histiotus and Lasiurus. Molecular markers in the amino acid sequences were identified which were specific to the seven clusters. These results, which constitute a novel finding for this pathogen, show that there are at least seven independent epidemiological rabies cycles maintained by seven genera of insectivorous bats in Brazil.
    Mesh-Begriff(e) Animals ; Antigens, Viral/genetics ; Brazil/epidemiology ; Chiroptera/classification ; Chiroptera/virology ; Genetic Variation ; Glycoproteins/genetics ; Mice ; Molecular Epidemiology ; Nucleocapsid Proteins/genetics ; Polymerase Chain Reaction ; Rabies/epidemiology ; Rabies/veterinary ; Rabies/virology ; Rabies virus/classification ; Rabies virus/genetics ; Sequence Analysis, DNA ; Species Specificity ; Viral Envelope Proteins/genetics
    Chemische Substanzen Antigens, Viral ; Glycoproteins ; Nucleocapsid Proteins ; Viral Envelope Proteins ; glycoprotein G, Rabies virus ; nucleocapsid protein, Rabies virus
    Sprache Englisch
    Erscheinungsdatum 2010-09-30
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 200425-2
    ISSN 1096-0341 ; 0042-6822
    ISSN (online) 1096-0341
    ISSN 0042-6822
    DOI 10.1016/j.virol.2010.05.030
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  6. Artikel: First detection and molecular diversity of Brazilian bovine torovirus (BToV) strains from young and adult cattle

    Nogueira, Juliana Silva / Asano, Karen Miyuki / de Souza, Sibele Pinheiro / Brandão, Paulo Eduardo / Richtzenhain, Leonardo José

    Research in veterinary science

    Band v. 95,, Heft no. 2

    Abstract: Bovine torovirus (BToV) is an established enteric pathogen of cattle, but its occurrence in Brazilian cattle had not been reported until now. This article describes a survey on BToV in Brazil carried out on 80 fecal samples from diarrheic young and adult ...

    Abstract Bovine torovirus (BToV) is an established enteric pathogen of cattle, but its occurrence in Brazilian cattle had not been reported until now. This article describes a survey on BToV in Brazil carried out on 80 fecal samples from diarrheic young and adult cattle, using a nested-RT-PCR targeting the nucleocapsid (N) gene. BToV was detected in 6.25% (5/80) of stool samples from three different geographic regions. Sequences analysis showed that Brazilian BToVs have a high degree of identity with European and Japanese BToVs and a lower degree of identity with North American Breda 1 strain. These results show that, albeit its low frequency and the scarce number of research on the field, BToV is still present amongst cattle populations.
    Schlagwörter nucleocapsid ; genes ; adults ; surveys ; sequence analysis ; pathogens ; cattle ; Bovine torovirus ; feces
    Sprache Englisch
    Dokumenttyp Artikel
    ISSN 0034-5288
    Datenquelle AGRIS - International Information System for the Agricultural Sciences and Technology

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  7. Artikel: Molecular and phylogenetic analysis of bovine coronavirus based on the spike glycoprotein gene

    Martínez, Nadia / Brandão, Paulo E. / de Souza, Sibele Pinheiro / Barrera, Maritza / Santana, Nelson / de Arce, Heidy Díaz / Pérez, Lester J.

    Infection, genetics, and evolution

    Band v. 12,, Heft no. 8

    Abstract: Bovine coronavirus has been associated with diarrhoea in newborn calves, winter dysentery in adult cattle and respiratory tract infections in calves and feedlot cattle. In Cuba, the presence of BCoV was first reported in 2006. Since then, sporadic ... ...

    Abstract Bovine coronavirus has been associated with diarrhoea in newborn calves, winter dysentery in adult cattle and respiratory tract infections in calves and feedlot cattle. In Cuba, the presence of BCoV was first reported in 2006. Since then, sporadic outbreaks have continued to occur. This study was aimed at deepening the knowledge of the evolution, molecular markers of virulence and epidemiology of BCoV in Cuba. A total of 30 samples collected between 2009 and 2011 were used for PCR amplification and direct sequencing of partial or full S gene. Sequence comparison and phylogenetic studies were conducted using partial or complete S gene sequences as phylogenetic markers. All Cuban bovine coronavirus sequences were located in a single cluster supported by 100% bootstrap and 1.00 posterior probability values. The Cuban bovine coronavirus sequences were also clustered with the USA BCoV strains corresponding to the GenBank accession numbers EF424621 and EF424623, suggesting a common origin for these viruses. This phylogenetic cluster was also the only group of sequences in which no recombination events were detected. Of the 45 amino acid changes found in the Cuban strains, four were unique.
    Schlagwörter feedlots ; genes ; phylogeny ; Bovine coronavirus ; genetic markers ; calves ; glycoproteins ; respiratory tract diseases ; amino acids ; nucleotide sequences ; adults ; neonates ; viruses ; virulence ; sequence analysis ; probability ; dysentery ; polymerase chain reaction
    Sprache Englisch
    Dokumenttyp Artikel
    ISSN 1567-1348
    Datenquelle AGRIS - International Information System for the Agricultural Sciences and Technology

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