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  1. Article: Abyssal plain faunal carbon flows remain depressed 26 years after a simulated deep-sea mining disturbance

    Stratmann, Tanja / Lins, Lidia / Purser, Autun / Marcon, Yann / Rodrigues, Clara / Ravara, Ascensão / Cunha, Marina R. / Simon-Lledó, Erik / Jones, Daniel / Sweetman, Andrew / Köser, Kevin / van Oevelen, Dick

    Biogeosciences, 15(13)4131–4145

    2018  

    Abstract: Future deep-sea mining for polymetallic nodules in abyssal plains will negatively impact the benthic ecosystem, but it is largely unclear whether this ecosystem will be able to recover from mining disturbance and if so, to what extent and at what ... ...

    Institution Senckenberg Forschungsinstitut und Naturmuseum Frankfurt
    Abstract Future deep-sea mining for polymetallic nodules in abyssal plains will negatively impact the benthic ecosystem, but it is largely unclear whether this ecosystem will be able to recover from mining disturbance and if so, to what extent and at what timescale. During the “DISturbance and reCOLonization” (DISCOL) experiment, a total of 22 % of the seafloor within a 10.8 km2 circular area of the nodule-rich seafloor in the Peru Basin (SE Pacific) was ploughed in 1989 to bury nodules and mix the surface sediment. This area was revisited 0.1, 0.5, 3, 7, and 26 years after the disturbance to assess macrofauna, invertebrate megafauna and fish density and diversity. We used this unique abyssal faunal time series to develop carbon-based food web models for each point in the time series using the linear inverse modeling approach for sediments subjected to two disturbance levels: (1) outside the plough tracks; not directly disturbed by plough, but probably suffered from additional sedimentation; and (2) inside the plough tracks. Total faunal carbon stock was always higher outside plough tracks compared with inside plough tracks. After 26 years, the carbon stock inside the plough tracks was 54 % of the carbon stock outside plough tracks. Deposit feeders were least affected by the disturbance, with modeled respiration, external predation, and excretion rates being reduced by only 2.6 % inside plough tracks compared with outside plough tracks after 26 years. In contrast, the respiration rate of filter and suspension feeders was 79.5 % lower in the plough tracks after 26 years. The “total system throughput” (T..), i.e., the total sum of modeled carbon flows in the food web, was higher throughout the time series outside plough tracks compared with the corresponding inside plough tracks area and was lowest inside plough tracks directly after the disturbance (8.63 × 10−3 ± 1.58 × 10−5 mmol C m−2 d−1). Even 26 years after the DISCOL disturbance, the discrepancy of T.. between outside and inside plough tracks was still 56 %. Hence, C cycling within the faunal compartments of an abyssal plain ecosystem remains reduced 26 years after physical disturbance, and a longer period is required for the system to recover from such a small-scale sediment disturbance experiment.
    Language English
    Document type Article
    Database Repository for Life Sciences

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  2. Article ; Online: Contrasting metabolic strategies of two co-occurring deep-sea octocorals.

    Rakka, M / Maier, S R / Van Oevelen, D / Godinho, A / Bilan, M / Orejas, C / Carreiro-Silva, M

    Scientific reports

    2021  Volume 11, Issue 1, Page(s) 10633

    Abstract: The feeding biology of deep-sea octocorals remains poorly understood, as attention is more often directed to reef building corals. The present study focused on two common deep-water octocoral species in the Azores Archipelago, Dentomuricea aff. meteor ... ...

    Abstract The feeding biology of deep-sea octocorals remains poorly understood, as attention is more often directed to reef building corals. The present study focused on two common deep-water octocoral species in the Azores Archipelago, Dentomuricea aff. meteor and Viminella flagellum, aiming at determining their ability to exploit different food sources. We adopted an experimental approach, with three different food sources, including live phytoplankton, live zooplankton and dissolved organic matter (DOM), that were artificially enriched with
    MeSH term(s) Animals ; Anthozoa/metabolism ; Carbon/analysis ; Models, Biological ; Nitrogen/analysis ; Oceans and Seas ; Oxygen Consumption
    Chemical Substances Carbon (7440-44-0) ; Nitrogen (N762921K75)
    Language English
    Publishing date 2021-05-20
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-021-90134-5
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Polymetallic nodules are essential for food-web integrity of a prospective deep-seabed mining area in Pacific abyssal plains.

    Stratmann, Tanja / Soetaert, Karline / Kersken, Daniel / van Oevelen, Dick

    Scientific reports

    2021  Volume 11, Issue 1, Page(s) 12238

    Abstract: Polymetallic nodule fields provide hard substrate for sessile organisms on the abyssal seafloor between 3000 and 6000 m water depth. Deep-seabed mining targets these mineral-rich nodules and will likely modify the consumer-resource (trophic) and ... ...

    Abstract Polymetallic nodule fields provide hard substrate for sessile organisms on the abyssal seafloor between 3000 and 6000 m water depth. Deep-seabed mining targets these mineral-rich nodules and will likely modify the consumer-resource (trophic) and substrate-providing (non-trophic) interactions within the abyssal food web. However, the importance of nodules and their associated sessile fauna in supporting food-web integrity remains unclear. Here, we use seafloor imagery and published literature to develop highly-resolved trophic and non-trophic interaction webs for the Clarion-Clipperton Fracture Zone (CCZ, central Pacific Ocean) and the Peru Basin (PB, South-East Pacific Ocean) and to assess how nodule removal may modify these networks. The CCZ interaction web included 1028 compartments connected with 59,793 links and the PB interaction web consisted of 342 compartments and 8044 links. We show that knock-down effects of nodule removal resulted in a 17.9% (CCZ) to 20.8% (PB) loss of all taxa and 22.8% (PB) to 30.6% (CCZ) loss of network links. Subsequent analysis identified stalked glass sponges living attached to the nodules as key structural species that supported a high diversity of associated fauna. We conclude that polymetallic nodules are critical for food-web integrity and that their absence will likely result in reduced local benthic biodiversity.
    MeSH term(s) Biodiversity ; Ecosystem ; Food Chain ; Minerals ; Mining ; Pacific Ocean ; Peru
    Chemical Substances Minerals
    Language English
    Publishing date 2021-06-10
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-021-91703-4
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Book ; Online: Voorstel voor monitoring van zoöplankton in de Noordzee

    Jak, Robbert G. / van Walraven, Lodewijk / van Oevelen, Dick

    monitoringplan zoöplankton MONS ID14

    2022  

    Abstract: In this report, a draft plan for monitoring and supporting research of zooplankton in the Dutch part of the North Sea has been drawn up. The aim is to draw up a zooplankton monitoring plan that can provide answers to the following questions in due course: ...

    Abstract In this report, a draft plan for monitoring and supporting research of zooplankton in the Dutch part of the North Sea has been drawn up. The aim is to draw up a zooplankton monitoring plan that can provide answers to the following questions in due course: What is the composition and distribution of zooplankton in space and time? And also: what are the trends (years and decades) (in composition and distribution of zooplankton in space and time) and what are the effects of new human use? The results from the monitoring should enable to understand and predict changes in zooplankton in the North Sea, so that validated scenario studies can be performed. All this in order to be able to assess the ecological capacity and the effects of individual and cumulative use thereon. The monitoring plan consists of two phases, a 1-year inventory study and a 4-year monitoring to test whether the results can be used to answer the questions. First of all, an overview was drawn up of the available knowledge about the policy frameworks and goals for zooplankton monitoring, an overview was given of monitoring activities in the Netherlands and other North Sea countries and a description was made of conventional and innovative techniques that are used for zooplankton monitoring. Internationally (e.g. OSPAR) the focus is currently mainly on indicators that indicate the role of zooplankton in the food chain. The density and size distribution of the mesozooplankton (0.2 – 20 mm) is used as an indicator for the food availability of fish. Biodiversity is also important. These indicators can be measured in different ways. In addition to classical methods, in which net samples are analyzed under the microscope, more and more innovative methods are being used. Phase 1: The plan for the first phase concerns a 1-year study aimed at determining the required resolution for identifying trends in space and time and the feasibility of innovative techniques to be used in the monitoring of zooplankton. The plan includes which classical and innovative ...
    Keywords Life Science
    Language Dutch
    Publisher Wageningen Marine Research
    Publishing country nl
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  5. Article ; Online: Annual biogeochemical cycling in intertidal sediments of a restored estuary reveals dependence of N, P, C and Si cycles to temperature and water column properties

    Rios-Yunes, Dunia / Tiano, Justin / van Oevelen, Dick / van Dalen, Jeroen / Soetaert, Karline

    Estuarine, Coastal and Shelf Science

    2023  Volume 282

    Abstract: Estuarine intertidal sediments are important centres for organic matter remineralization and nutrients recycling. Nevertheless, there is limited understanding regarding how these processes occur along the salinity gradient and their seasonality. Here, we ...

    Abstract Estuarine intertidal sediments are important centres for organic matter remineralization and nutrients recycling. Nevertheless, there is limited understanding regarding how these processes occur along the salinity gradient and their seasonality. Here, we report on the seasonal biogeochemical cycles from three types of intertidal sedimentary habitats (freshwater, brackish and marine) located in the Western Scheldt estuary (The Netherlands and Belgium). A full year of solute fluxes, porewater nutrient and sediment pigment concentrations at a monthly resolution revealed clear differences in the biogeochemistry of the three sites, indicating that environmental conditions determined the local nutrient dynamics. Temperature controlled sediment oxygen consumption rates and nutrient fluxes, but also affected pore water nutrient concentrations up to 14 cm deep. Fresh and brackish sediments had a net influx of dissolved inorganic nitrogen (DIN) (−1.62 mmol m−2 d−1 and -2.84 mmol m−2 d−1, respectively), while only the freshwater sediments showed a net influx of phosphate (−0.07 mmol m−2 d−1). We estimated that intertidal sediments remineralized a total of 10,000 t C y−1, with 97% of mineralization occurring in the brackish and marine parts. Overall, sediments removed 11% (1500 t N y−1) and 15% (∼200 t P y−1) of the total nitrogen and phosphorus entering the estuary from riverine input. Moreover, observations revealed the historical improvement of water quality resulting from water treatment policies. This spatiotemporal study of OM remineralization and early diagenesis in estuarine systems highlights the importance of intertidal sediments for estuarine systems. Our observations can be used in models to predict estuarine biogeochemistry or assess climate change scenarios.
    Keywords Life Science
    Subject code 550
    Language English
    Publishing country nl
    Document type Article ; Online
    ISSN 0272-7714
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article: Citrus sudden death-associated virus as a new expression vector for rapid

    Matsumura, Emilyn E / Guo, Fei / Boogers, Daan / van Oevelen, Dennis / Vu, Sandra T / Falk, Bryce W

    Biotechnology reports (Amsterdam, Netherlands)

    2022  Volume 35, Page(s) e00739

    Abstract: The more we understand the strategies used by viruses for protein expression, the more possibilities we have to exploit viruses as expression vectors for heterologous protein production. Advances in the development of virus-based expression systems have ... ...

    Abstract The more we understand the strategies used by viruses for protein expression, the more possibilities we have to exploit viruses as expression vectors for heterologous protein production. Advances in the development of virus-based expression systems have been possible due to generation of many virus infectious clones, especially those derived from plant viruses, which have the capability for rapid and high-level transient expression of proteins in plant cells, a robust and low-cost bioreactor. In this work, we generated new replicative virus expression vectors based on a previously constructed citrus sudden death-associated virus (CSDaV) infectious cDNA clone. These vectors were generated to express the reporter green fluorescent protein (GFP) in
    Language English
    Publishing date 2022-05-17
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 2801018-8
    ISSN 2215-017X
    ISSN 2215-017X
    DOI 10.1016/j.btre.2022.e00739
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Book ; Online: Rapid changes in the North Sea require long-term roadmap

    Peck, M.A. / Bush, S.R. / Oude Elferink, A. / Rivero, S. / van Duren, L. / van Oevelen, D.

    2021  

    Abstract: For the North Sea to continue to sustain ecosystems and the social well-being of Northern Europe, action is needed by industry and policy makers alike. This is necessary to maintain biodiversity and natural productivity in the face of growing offshore ... ...

    Abstract For the North Sea to continue to sustain ecosystems and the social well-being of Northern Europe, action is needed by industry and policy makers alike. This is necessary to maintain biodiversity and natural productivity in the face of growing offshore economic activity.
    Keywords Life Science
    Language English
    Publisher SWZ Maritime
    Publishing country nl
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  8. Article: Corrigendum: A Worm's World: Ecological Flexibility Pays Off for Free-Living Nematodes in Sediments and Soils.

    Schratzberger, Michaela / Holterman, Martijn / Van Oevelen, Dick / Helder, Johannes

    Bioscience

    2019  Volume 69, Issue 11, Page(s) 945

    Abstract: This corrects the article DOI: 10.1093/biosci/biz086.]. ...

    Abstract [This corrects the article DOI: 10.1093/biosci/biz086.].
    Language English
    Publishing date 2019-09-25
    Publishing country England
    Document type Published Erratum
    ZDB-ID 280313-6
    ISSN 0006-3568
    ISSN 0006-3568
    DOI 10.1093/biosci/biz120
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article: A Worm's World: Ecological Flexibility Pays Off for Free-Living Nematodes in Sediments and Soils.

    Schratzberger, Michaela / Holterman, Martijn / van Oevelen, Dick / Helder, Johannes

    Bioscience

    2019  Volume 69, Issue 11, Page(s) 867–876

    Abstract: Free-living nematodes, an ancient animal phylum of unsegmented microscopic roundworms, have successfully adapted to nearly every ecosystem on Earth: from marine and freshwater to land, from the polar regions to the tropics, and from the mountains to the ... ...

    Abstract Free-living nematodes, an ancient animal phylum of unsegmented microscopic roundworms, have successfully adapted to nearly every ecosystem on Earth: from marine and freshwater to land, from the polar regions to the tropics, and from the mountains to the ocean depths. They are globally the most abundant animals in sediments and soils. In the present article, we identify the factors that collectively explain the successful ecological proliferation of free-living nematodes and demonstrate the impact they have on vital sediment and soil processes. The ecological success of nematodes is strongly linked to their ability to feed on various food sources that are present in both sediments and soils, and to proliferate rapidly and survive in contrasting environmental conditions. The adaptations, roles, and behaviors of free-living nematodes have important implications for the resilience of sediments and soils, and for emergent animal communities responding to human alterations to ecosystems worldwide.
    Language English
    Publishing date 2019-09-04
    Publishing country England
    Document type Journal Article
    ZDB-ID 280313-6
    ISSN 0006-3568
    ISSN 0006-3568
    DOI 10.1093/biosci/biz086
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Polymetallic nodules are essential for food-web integrity of a prospective deep-seabed mining area in Pacific abyssal plains

    Stratmann, Tanja / Soetaert, Karline / Kersken, Daniel / van Oevelen, Dick

    2021  

    Abstract: Polymetallic nodule fields provide hard substrate for sessile organisms on the abyssal seafloor between 3000 and 6000 m water depth. Deep-seabed mining targets these mineral-rich nodules and will likely modify the consumer-resource (trophic) and ... ...

    Abstract Polymetallic nodule fields provide hard substrate for sessile organisms on the abyssal seafloor between 3000 and 6000 m water depth. Deep-seabed mining targets these mineral-rich nodules and will likely modify the consumer-resource (trophic) and substrate-providing (non-trophic) interactions within the abyssal food web. However, the importance of nodules and their associated sessile fauna in supporting food-web integrity remains unclear. Here, we use seafloor imagery and published literature to develop highly-resolved trophic and non-trophic interaction webs for the Clarion-Clipperton Fracture Zone (CCZ, central Pacific Ocean) and the Peru Basin (PB, South-East Pacific Ocean) and to assess how nodule removal may modify these networks. The CCZ interaction web included 1028 compartments connected with 59,793 links and the PB interaction web consisted of 342 compartments and 8044 links. We show that knock-down effects of nodule removal resulted in a 17.9% (CCZ) to 20.8% (PB) loss of all taxa and 22.8% (PB) to 30.6% (CCZ) loss of network links. Subsequent analysis identified stalked glass sponges living attached to the nodules as key structural species that supported a high diversity of associated fauna. We conclude that polymetallic nodules are critical for food-web integrity and that their absence will likely result in reduced local benthic biodiversity.
    Language English
    Publishing date 2021-12-10
    Publisher Nature Research
    Publishing country de
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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