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  1. Artikel ; Online: Gene Therapy for Occupational Lung Disease: Steering Macrophages in the Right Direction?

    Remcho, T Parks / Kolls, Jay K

    American journal of respiratory cell and molecular biology

    2022  Band 68, Heft 2, Seite(n) 129–130

    Mesh-Begriff(e) Humans ; Adenoviridae ; Lung Diseases/genetics ; Lung Diseases/therapy ; Pneumonia ; Fibrosis ; Genetic Therapy
    Sprache Englisch
    Erscheinungsdatum 2022-10-26
    Erscheinungsland United States
    Dokumenttyp Editorial ; Research Support, N.I.H., Extramural ; Comment
    ZDB-ID 1025960-0
    ISSN 1535-4989 ; 1044-1549
    ISSN (online) 1535-4989
    ISSN 1044-1549
    DOI 10.1165/rcmb.2022-0408ED
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  2. Artikel ; Online: An ALARMINg Type 2 Response in Cystic Fibrosis-The Key to Understanding ABPA?

    Bojanowski, Christine M / Bitoun, Jacob P / Kolls, Jay K

    American journal of respiratory and critical care medicine

    2023  Band 207, Heft 11, Seite(n) 1418–1419

    Mesh-Begriff(e) Humans ; Cystic Fibrosis/genetics ; Interleukin-33 ; Respiratory System ; Inflammation
    Chemische Substanzen Interleukin-33
    Sprache Englisch
    Erscheinungsdatum 2023-04-04
    Erscheinungsland United States
    Dokumenttyp Editorial ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, N.I.H., Extramural ; Comment
    ZDB-ID 1180953-x
    ISSN 1535-4970 ; 0003-0805 ; 1073-449X
    ISSN (online) 1535-4970
    ISSN 0003-0805 ; 1073-449X
    DOI 10.1164/rccm.202303-0580ED
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  3. Artikel ; Online: Multi-omic comparisons between CFBE41o- cells stably expressing wild-type CFTR and F508del-mutant CFTR.

    Lu, Shiping / Kolls, Jay K

    Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society

    2022  Band 22, Heft 1, Seite(n) 146–155

    Abstract: Background: Cystic fibrosis (CF) is characterized by chronic inflammation and excessive cytokines secretion in the lung. Isogenic human CF bronchial epithelial (CFBE41o-) cell lines stably expressing wt-CFTR (WTBE) or F508del mutant (CFBE) are widely ... ...

    Abstract Background: Cystic fibrosis (CF) is characterized by chronic inflammation and excessive cytokines secretion in the lung. Isogenic human CF bronchial epithelial (CFBE41o-) cell lines stably expressing wt-CFTR (WTBE) or F508del mutant (CFBE) are widely used tools in understanding responses to stimuli or drugs and CF pathogenesis in vitro. However, the intrinsic cellular differences in culture are unknown.
    Methods: We performed integrative analyses of these isogenic cells at the protein, mRNA, and chromatin levels in the submerged and air-liquid interface (ALI) conditions to determine cell intrinsic effects of mutant versus complemented CFTR expression.
    Results: CFBE and WTBE cells displayed different cytokine secretion patterns, including IL-6, IL-8, CXCL1, CXCL10, and CCL5. The ALI culture dramatically increased cytokine secretion in both cells. Assay for transposase-accessible chromatin using sequencing (ATAC-seq) result showed different chromatin landscapes upon polarization and CFBE cells, compared to WTBE cells, exhibited higher genome-wide chromatin accessibility under both culture methods. At the transcriptome level, differentially expressed genes identified by mRNA sequencing between two cell lines were highly concentrated in immunity-related pathways.
    Conclusions: This multilayered study shows that expression of wild-type CFTR has an epithelial cell intrinsic effect on the cell's epigenome and transcriptome particularly in immunity relevant activities. These data will serve as a resource for the CF community and may serve as epithelial biomarkers for CFTR mRNA therapy.
    Mesh-Begriff(e) Humans ; Chromatin/metabolism ; Cystic Fibrosis/genetics ; Cystic Fibrosis Transmembrane Conductance Regulator/genetics ; Cytokines/metabolism ; Epithelial Cells/metabolism ; Multiomics ; RNA, Messenger/metabolism
    Chemische Substanzen CFTR protein, human ; Chromatin ; Cystic Fibrosis Transmembrane Conductance Regulator (126880-72-6) ; Cytokines ; RNA, Messenger
    Sprache Englisch
    Erscheinungsdatum 2022-07-06
    Erscheinungsland Netherlands
    Dokumenttyp Comparative Study ; Journal Article ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, N.I.H., Extramural
    ZDB-ID 2084724-5
    ISSN 1873-5010 ; 1569-1993
    ISSN (online) 1873-5010
    ISSN 1569-1993
    DOI 10.1016/j.jcf.2022.06.010
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  4. Artikel ; Online: Genetic Mouse Models of Pneumocystis Pneumonia.

    Hoving, J Claire / Munyonho, Ferris T / Kolls, Jay K

    Methods in molecular biology (Clifton, N.J.)

    2023  Band 2667, Seite(n) 169–179

    Abstract: Pneumocystis jirovecii causes pneumonia in immunocompromised patients. A major challenge in drug susceptibility testing and in understanding host/pathogen interactions is that Pneumocystis spp. are not viable in vitro. Continuous culture of the organism ... ...

    Abstract Pneumocystis jirovecii causes pneumonia in immunocompromised patients. A major challenge in drug susceptibility testing and in understanding host/pathogen interactions is that Pneumocystis spp. are not viable in vitro. Continuous culture of the organism is not currently available, and therefore, developing new drug targets is very limited. Due to this limitation, mouse models of Pneumocystis pneumonia have proven to be an invaluable resource to researchers. In this chapter, we provide an overview of selected methods used in mouse models of infection including, in vivo Pneumocystis murina propagation, routes of transmission, genetic mouse models available, a P. murina life form-specific model, a mouse model of PCP immune reconstitution inflammatory syndrome (IRIS), and the experimental parameters associated with these models.
    Mesh-Begriff(e) Animals ; Mice ; Microbial Sensitivity Tests ; Mycobacterium tuberculosis ; Pneumocystis carinii/genetics ; Pneumonia, Pneumocystis/genetics
    Sprache Englisch
    Erscheinungsdatum 2023-05-05
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Review
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/978-1-0716-3199-7_13
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  5. Artikel ; Online: Early Antibiotics in Cystic Fibrosis: Lessons from the Cystic Fibrosis Pig Model.

    Lu, Shiping / Kolls, Jay K

    American journal of respiratory and critical care medicine

    2021  Band 204, Heft 6, Seite(n) 626–627

    Mesh-Begriff(e) Animals ; Anti-Bacterial Agents/therapeutic use ; Cystic Fibrosis/drug therapy ; Pseudomonas Infections/drug therapy ; Swine ; Tobramycin
    Chemische Substanzen Anti-Bacterial Agents ; Tobramycin (VZ8RRZ51VK)
    Sprache Englisch
    Erscheinungsdatum 2021-08-03
    Erscheinungsland United States
    Dokumenttyp Editorial ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Comment
    ZDB-ID 1180953-x
    ISSN 1535-4970 ; 0003-0805 ; 1073-449X
    ISSN (online) 1535-4970
    ISSN 0003-0805 ; 1073-449X
    DOI 10.1164/rccm.202106-1383ED
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  6. Artikel ; Online: Role of the T cell vitamin D receptor in severe COVID-19.

    Kolls, Jay K / Garry, Robert F

    Nature immunology

    2021  Band 23, Heft 1, Seite(n) 5–6

    Mesh-Begriff(e) Basic-Leucine Zipper Transcription Factors/metabolism ; COVID-19/pathology ; Humans ; Interferon-gamma/immunology ; Interleukin-10/immunology ; Membrane Cofactor Protein/immunology ; Proto-Oncogene Proteins c-jun/metabolism ; Receptors, Calcitriol/genetics ; Receptors, Calcitriol/metabolism ; SARS-CoV-2/immunology ; STAT3 Transcription Factor/metabolism ; Signal Transduction/immunology ; Th1 Cells/immunology ; Vitamin D/metabolism
    Chemische Substanzen BACH2 protein, human ; Basic-Leucine Zipper Transcription Factors ; CD46 protein, human ; IFNG protein, human ; IL10 protein, human ; JUN protein, human ; Membrane Cofactor Protein ; Proto-Oncogene Proteins c-jun ; Receptors, Calcitriol ; STAT3 Transcription Factor ; STAT3 protein, human ; VDR protein, human ; Interleukin-10 (130068-27-8) ; Vitamin D (1406-16-2) ; Interferon-gamma (82115-62-6)
    Sprache Englisch
    Erscheinungsdatum 2021-12-20
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 2016987-5
    ISSN 1529-2916 ; 1529-2908
    ISSN (online) 1529-2916
    ISSN 1529-2908
    DOI 10.1038/s41590-021-01098-7
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  7. Artikel ; Online: An Emerging Role of B Cell Immunity in Susceptibility to Pneumocystis Pneumonia.

    Kolls, Jay K

    American journal of respiratory cell and molecular biology

    2017  Band 56, Heft 3, Seite(n) 279–280

    Sprache Englisch
    Erscheinungsdatum 2017-03
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 1025960-0
    ISSN 1535-4989 ; 1044-1549
    ISSN (online) 1535-4989
    ISSN 1044-1549
    DOI 10.1165/rcmb.2016-0360ED
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  8. Artikel: Commentary: Understanding the Impact of Infection, Inflammation and Their Persistence in the Pathogenesis of Bronchopulmonary Dysplasia.

    Kolls, Jay K

    Frontiers in medicine

    2017  Band 4, Seite(n) 24

    Sprache Englisch
    Erscheinungsdatum 2017-03-02
    Erscheinungsland Switzerland
    Dokumenttyp Journal Article ; Comment
    ZDB-ID 2775999-4
    ISSN 2296-858X
    ISSN 2296-858X
    DOI 10.3389/fmed.2017.00024
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  9. Artikel ; Online: Mucosal Immunity in Cystic Fibrosis.

    Bojanowski, Christine M / Lu, Shiping / Kolls, Jay K

    Journal of immunology (Baltimore, Md. : 1950)

    2022  Band 207, Heft 12, Seite(n) 2901–2912

    Abstract: The highly complex and variable genotype-phenotype relationships observed in cystic fibrosis (CF) have been an area of growing interest since the discovery of the CF transmembrane conductance regulator ( ...

    Abstract The highly complex and variable genotype-phenotype relationships observed in cystic fibrosis (CF) have been an area of growing interest since the discovery of the CF transmembrane conductance regulator (
    Mesh-Begriff(e) Cystic Fibrosis/microbiology ; Cystic Fibrosis Transmembrane Conductance Regulator/genetics ; Humans ; Immunity, Mucosal ; Inflammation ; Lung/pathology ; Phenotype
    Chemische Substanzen Cystic Fibrosis Transmembrane Conductance Regulator (126880-72-6)
    Sprache Englisch
    Erscheinungsdatum 2022-06-21
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Review ; Research Support, Non-U.S. Gov't ; Research Support, N.I.H., Extramural
    ZDB-ID 3056-9
    ISSN 1550-6606 ; 0022-1767 ; 1048-3233 ; 1047-7381
    ISSN (online) 1550-6606
    ISSN 0022-1767 ; 1048-3233 ; 1047-7381
    DOI 10.4049/jimmunol.2100424
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  10. Artikel ; Online: Cell-intrinsic and -extrinsic effects of SARS-CoV-2 RNA on pathogenesis: single-cell meta-analysis.

    Khatun, Mst Shamima / Remcho, T Parks / Qin, Xuebin / Kolls, Jay K

    mSphere

    2023  Band 8, Heft 5, Seite(n) e0037523

    Abstract: Single-cell RNA-seq has been used to characterize human COVID-19. To determine if preclinical models successfully mimic the cell-intrinsic and -extrinsic effects of severe disease, we conducted a meta-analysis of single-cell data across five model ... ...

    Abstract Single-cell RNA-seq has been used to characterize human COVID-19. To determine if preclinical models successfully mimic the cell-intrinsic and -extrinsic effects of severe disease, we conducted a meta-analysis of single-cell data across five model species. To assess whether dissemination of viral RNA in lung cells tracks pathology and results in cell-intrinsic and -extrinsic transcriptomic changes in COVID-19. We conducted a meta-analysis by analyzing six publicly available, scRNA-seq data sets. We used dual mapping (host and virus) and differential gene expression analyses to compare viral
    Mesh-Begriff(e) Cricetinae ; Humans ; Animals ; Mice ; RNA, Viral/genetics ; SARS-CoV-2/genetics ; Endothelial Cells ; Ferrets ; Interleukin-18 ; Macaca mulatta ; COVID-19
    Chemische Substanzen RNA, Viral ; K-18 conjugate ; Interleukin-18
    Sprache Englisch
    Erscheinungsdatum 2023-09-22
    Erscheinungsland United States
    Dokumenttyp Meta-Analysis ; Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ISSN 2379-5042
    ISSN (online) 2379-5042
    DOI 10.1128/msphere.00375-23
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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