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  1. Article ; Online: Clinical validation of loop-mediated isothermal amplification for the detection of

    Peirano, Gisele / Castellanos, L Ricardo / Matsumura, Yasufumi / Chaffee, Ryan / Castañeda-Mogollón, Daniel / Pillai, Dylan R / Pitout, Johann D D

    Journal of clinical microbiology

    2024  Volume 62, Issue 3, Page(s) e0168723

    Abstract: The dissemination of : Importance: We developed an accurate non-culture-based loop-mediated isothermal amplification (LAMP) methodology for the detection of (sequence type) STc131 ... ...

    Abstract The dissemination of
    Importance: We developed an accurate non-culture-based loop-mediated isothermal amplification (LAMP) methodology for the detection of (sequence type) STc131 among
    MeSH term(s) Humans ; Escherichia coli/genetics ; Drug Resistance, Multiple, Bacterial/genetics ; Escherichia coli Infections/epidemiology ; Nucleic Acid Amplification Techniques ; beta-Lactamases/genetics ; Anti-Bacterial Agents/pharmacology ; Molecular Diagnostic Techniques
    Chemical Substances beta-Lactamases (EC 3.5.2.6) ; Anti-Bacterial Agents
    Language English
    Publishing date 2024-02-22
    Publishing country United States
    Document type Journal Article
    ZDB-ID 390499-4
    ISSN 1098-660X ; 0095-1137
    ISSN (online) 1098-660X
    ISSN 0095-1137
    DOI 10.1128/jcm.01687-23
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Antimicrobial Resistance in Salmonella enterica Serovar Paratyphi B Variant Java in Poultry from Europe and Latin America.

    Castellanos, L Ricardo / van der Graaf-van Bloois, Linda / Donado-Godoy, Pilar / Veldman, Kees / Duarte, Francisco / Acuña, María T / Jarquín, Claudia / Weill, François-Xavier / Mevius, Dik J / Wagenaar, Jaap A / Hordijk, Joost / Zomer, Aldert L

    Emerging infectious diseases

    2020  Volume 26, Issue 6, Page(s) 1164–1173

    Abstract: Salmonella enterica serovar Paratyphi B variant Java sequence type 28 is prevalent in poultry and poultry meat. We investigated the evolutionary relatedness between sequence type 28 strains from Europe and Latin America using time-resolved phylogeny and ... ...

    Abstract Salmonella enterica serovar Paratyphi B variant Java sequence type 28 is prevalent in poultry and poultry meat. We investigated the evolutionary relatedness between sequence type 28 strains from Europe and Latin America using time-resolved phylogeny and principal component analysis. We sequenced isolates from Colombia, Guatemala, Costa Rica, and the Netherlands and complemented them with publicly available genomes from Europe, Africa, and the Middle East. Phylogenetic time trees and effective population sizes (N
    MeSH term(s) Africa ; Animals ; Anti-Bacterial Agents/pharmacology ; Colombia ; Costa Rica ; Drug Resistance, Bacterial ; Drug Resistance, Multiple, Bacterial ; Europe/epidemiology ; Guatemala ; Indonesia ; Latin America/epidemiology ; Middle East ; Netherlands ; Phylogeny ; Poultry ; Salmonella enterica/genetics ; Salmonella paratyphi B/genetics
    Chemical Substances Anti-Bacterial Agents
    Language English
    Publishing date 2020-05-22
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1380686-5
    ISSN 1080-6059 ; 1080-6040
    ISSN (online) 1080-6059
    ISSN 1080-6040
    DOI 10.3201/eid2606.191121
    Database MEDical Literature Analysis and Retrieval System OnLINE

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