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  1. Article ; Online: HLA-A*11:01-restricted CD8+ T cell immunity against influenza A and influenza B viruses in Indigenous and non-Indigenous people.

    Jennifer R Habel / Andrea T Nguyen / Louise C Rowntree / Christopher Szeto / Nicole A Mifsud / E Bridie Clemens / Liyen Loh / Weisan Chen / Steve Rockman / Jane Nelson / Jane Davies / Adrian Miller / Steven Y C Tong / Jamie Rossjohn / Stephanie Gras / Anthony W Purcell / Luca Hensen / Katherine Kedzierska / Patricia T Illing

    PLoS Pathogens, Vol 18, Iss 3, p e

    2022  Volume 1010337

    Abstract: HLA-A*11:01 is one of the most prevalent human leukocyte antigens (HLAs), especially in East Asian and Oceanian populations. It is also highly expressed in Indigenous people who are at high risk of severe influenza disease. As CD8+ T cells can provide ... ...

    Abstract HLA-A*11:01 is one of the most prevalent human leukocyte antigens (HLAs), especially in East Asian and Oceanian populations. It is also highly expressed in Indigenous people who are at high risk of severe influenza disease. As CD8+ T cells can provide broadly cross-reactive immunity to distinct influenza strains and subtypes, including influenza A, B and C viruses, understanding CD8+ T cell immunity to influenza viruses across prominent HLA types is needed to rationally design a universal influenza vaccine and generate protective immunity especially for high-risk populations. As only a handful of HLA-A*11:01-restricted CD8+ T cell epitopes have been described for influenza A viruses (IAVs) and epitopes for influenza B viruses (IBVs) were still unknown, we embarked on an epitope discovery study to define a CD8+ T cell landscape for HLA-A*11:01-expressing Indigenous and non-Indigenous Australian people. Using mass-spectrometry, we identified IAV- and IBV-derived peptides presented by HLA-A*11:01 during infection. 79 IAV and 57 IBV peptides were subsequently screened for immunogenicity in vitro with peripheral blood mononuclear cells from HLA-A*11:01-expressing Indigenous and non-Indigenous Australian donors. CD8+ T cell immunogenicity screening revealed two immunogenic IAV epitopes (A11/PB2320-331 and A11/PB2323-331) and the first HLA-A*11:01-restricted IBV epitopes (A11/M41-49, A11/NS1186-195 and A11/NP511-520). The immunogenic IAV- and IBV-derived peptides were >90% conserved among their respective influenza viruses. Identification of novel immunogenic HLA-A*11:01-restricted CD8+ T cell epitopes has implications for understanding how CD8+ T cell immunity is generated towards IAVs and IBVs. These findings can inform the development of rationally designed, broadly cross-reactive influenza vaccines to ensure protection from severe influenza disease in HLA-A*11:01-expressing individuals.
    Keywords Immunologic diseases. Allergy ; RC581-607 ; Biology (General) ; QH301-705.5
    Subject code 570 ; 610
    Language English
    Publishing date 2022-03-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  2. Article ; Online: Immune profiling of SARS-CoV-2 infection during pregnancy reveals NK cell and γδ T cell perturbations

    Jennifer R. Habel / Brendon Y. Chua / Lukasz Kedzierski / Kevin J. Selva / Timon Damelang / Ebene R. Haycroft / Thi H.O. Nguyen / Hui-Fern Koay / Suellen Nicholson / Hayley A. McQuilten / Xiaoxiao Jia / Lilith F. Allen / Luca Hensen / Wuji Zhang / Carolien E. van de Sandt / Jessica A. Neil / Katherine Pragastis / Jillian S.Y. Lau / Jaycee Jumarang /
    E. Kaitlynn Allen / Fatima Amanant / Florian Krammer / Kathleen M. Wragg / Jennifer A. Juno / Adam K. Wheatley / Hyon-Xhi Tan / Gabrielle Pell / Susan Walker / Jennifer Audsley / Arnold Reynaldi / Irani Thevarajan / Justin T. Denholm / Kanta Subbarao / Miles P. Davenport / P. Mark Hogarth / Dale I. Godfrey / Allen C. Cheng / Steven Y.C. Tong / Katherine Bond / Deborah A. Williamson / James H. McMahon / Paul G. Thomas / Pia S. Pannaraj / Fiona James / Natasha E. Holmes / Olivia C. Smibert / Jason A. Trubiano / Claire L. Gordon / Amy W. Chung / Clare L. Whitehead / Stephen J. Kent / Martha Lappas / Louise C. Rowntree / Katherine Kedzierska

    JCI Insight, Vol 8, Iss

    2023  Volume 7

    Abstract: Pregnancy poses a greater risk for severe COVID-19; however, underlying immunological changes associated with SARS-CoV-2 during pregnancy are poorly understood. We defined immune responses to SARS-CoV-2 in unvaccinated pregnant and nonpregnant women with ...

    Abstract Pregnancy poses a greater risk for severe COVID-19; however, underlying immunological changes associated with SARS-CoV-2 during pregnancy are poorly understood. We defined immune responses to SARS-CoV-2 in unvaccinated pregnant and nonpregnant women with acute and convalescent COVID-19, quantifying 217 immunological parameters. Humoral responses to SARS-CoV-2 were similar in pregnant and nonpregnant women, although our systems serology approach revealed distinct antibody and FcγR profiles between pregnant and nonpregnant women. Cellular analyses demonstrated marked differences in NK cell and unconventional T cell activation dynamics in pregnant women. Healthy pregnant women displayed preactivated NK cells and γδ T cells when compared with healthy nonpregnant women, which remained unchanged during acute and convalescent COVID-19. Conversely, nonpregnant women had prototypical activation of NK and γδ T cells. Activation of CD4+ and CD8+ T cells and T follicular helper cells was similar in SARS-CoV-2–infected pregnant and nonpregnant women, while antibody-secreting B cells were increased in pregnant women during acute COVID-19. Elevated levels of IL-8, IL-10, and IL-18 were found in pregnant women in their healthy state, and these cytokine levels remained elevated during acute and convalescent COVID-19. Collectively, we demonstrate perturbations in NK cell and γδ T cell activation in unvaccinated pregnant women with COVID-19, which may impact disease progression and severity during pregnancy.
    Keywords Immunology ; Infectious disease ; Medicine ; R
    Subject code 610
    Language English
    Publishing date 2023-04-01T00:00:00Z
    Publisher American Society for Clinical investigation
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article ; Online: SARS-CoV-2 infection results in immune responses in the respiratory tract and peripheral blood that suggest mechanisms of disease severity

    Wuji Zhang / Brendon Y. Chua / Kevin J. Selva / Lukasz Kedzierski / Thomas M. Ashhurst / Ebene R. Haycroft / Suzanne K. Shoffner-Beck / Luca Hensen / David F. Boyd / Fiona James / Effie Mouhtouris / Jason C. Kwong / Kyra Y. L. Chua / George Drewett / Ana Copaescu / Julie E. Dobson / Louise C. Rowntree / Jennifer R. Habel / Lilith F. Allen /
    Hui-Fern Koay / Jessica A. Neil / Matthew J. Gartner / Christina Y. Lee / Patiyan Andersson / Sadid F. Khan / Luke Blakeway / Jessica Wisniewski / James H. McMahon / Erica E. Vine / Anthony L. Cunningham / Jennifer Audsley / Irani Thevarajan / Torsten Seemann / Norelle L. Sherry / Fatima Amanat / Florian Krammer / Sarah L. Londrigan / Linda M. Wakim / Nicholas J. C. King / Dale I. Godfrey / Laura K. Mackay / Paul G. Thomas / Suellen Nicholson / Kelly B. Arnold / Amy W. Chung / Natasha E. Holmes / Olivia C. Smibert / Jason A. Trubiano / Claire L. Gordon / Thi H. O. Nguyen

    Nature Communications, Vol 13, Iss 1, Pp 1-

    2022  Volume 18

    Abstract: The immune response to SARS-CoV-2 infection is variable but has been linked to prognosis and the development of severe immunopathology. Here the authors assess a range of immune parameters in both peripheral blood and respiratory samples, providing a ... ...

    Abstract The immune response to SARS-CoV-2 infection is variable but has been linked to prognosis and the development of severe immunopathology. Here the authors assess a range of immune parameters in both peripheral blood and respiratory samples, providing a comparative assessment of the immune response between these compartments and their potential impact on immune-pathogenesis.
    Keywords Science ; Q
    Language English
    Publishing date 2022-05-01T00:00:00Z
    Publisher Nature Portfolio
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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