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  1. Article: Performance of using opposing homozygotes for paternity testing in Japanese Black cattle

    Komiya, Ryota / Ogawa, Shinichiro / Aonuma, Tatsuya / Satoh, Masahiro

    Journal of animal breeding and genetics. 2022 Jan., v. 139, no. 1

    2022  

    Abstract: Genome‐wide single nucleotide polymorphism (SNP) markers in Japanese Black cattle enable genomic prediction and verifying parent–offspring relationships. We assessed the performance of opposing homozygotes (OH) for paternity testing in Japanese Black ... ...

    Abstract Genome‐wide single nucleotide polymorphism (SNP) markers in Japanese Black cattle enable genomic prediction and verifying parent–offspring relationships. We assessed the performance of opposing homozygotes (OH) for paternity testing in Japanese Black cattle, using SNP genotype information of 50 sires and 3,420 fattened animals, 1,945 of which were fathered by the 50 genotyped sires. The number of OH was counted for each sire–progeny pair in 28,764 SNPs with minor allele frequencies of ≥0.05 in this population. Across all pairs of animals, the number of OH tended to increase as the pedigree‐based coefficient of relationship decreased. With a threshold of 288 (1% of SNPs) for paternity testing, most sire–progeny pairs were detected as true relationships. The frequency of Mendelian inconsistencies was 2.4%, reflecting the high accuracy of pedigree information in Japanese Black cattle population. The results indicate the utility of OH for paternity testing in Japanese Black cattle.
    Keywords Wagyu ; alleles ; cattle ; coefficient of relationship ; genomics ; genotyping ; homozygosity ; paternity ; pedigree ; prediction ; single nucleotide polymorphism
    Language English
    Dates of publication 2022-01
    Size p. 113-124.
    Publishing place John Wiley & Sons, Ltd
    Document type Article
    Note JOURNAL ARTICLE
    ZDB-ID 631363-2
    ISSN 0931-2668
    ISSN 0931-2668
    DOI 10.1111/jbg.12649
    Database NAL-Catalogue (AGRICOLA)

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  2. Article ; Online: Performance of using opposing homozygotes for paternity testing in Japanese Black cattle.

    Komiya, Ryota / Ogawa, Shinichiro / Aonuma, Tatsuya / Satoh, Masahiro

    Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie

    2021  Volume 139, Issue 1, Page(s) 113–124

    Abstract: Genome-wide single nucleotide polymorphism (SNP) markers in Japanese Black cattle enable genomic prediction and verifying parent-offspring relationships. We assessed the performance of opposing homozygotes (OH) for paternity testing in Japanese Black ... ...

    Abstract Genome-wide single nucleotide polymorphism (SNP) markers in Japanese Black cattle enable genomic prediction and verifying parent-offspring relationships. We assessed the performance of opposing homozygotes (OH) for paternity testing in Japanese Black cattle, using SNP genotype information of 50 sires and 3,420 fattened animals, 1,945 of which were fathered by the 50 genotyped sires. The number of OH was counted for each sire-progeny pair in 28,764 SNPs with minor allele frequencies of ≥0.05 in this population. Across all pairs of animals, the number of OH tended to increase as the pedigree-based coefficient of relationship decreased. With a threshold of 288 (1% of SNPs) for paternity testing, most sire-progeny pairs were detected as true relationships. The frequency of Mendelian inconsistencies was 2.4%, reflecting the high accuracy of pedigree information in Japanese Black cattle population. The results indicate the utility of OH for paternity testing in Japanese Black cattle.
    MeSH term(s) Animals ; Cattle/genetics ; Gene Frequency ; Genotype ; Homozygote ; Paternity ; Pedigree ; Polymorphism, Single Nucleotide
    Language English
    Publishing date 2021-09-09
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 631363-2
    ISSN 1439-0388 ; 0044-3581 ; 0931-2668 ; 1742-4488
    ISSN (online) 1439-0388
    ISSN 0044-3581 ; 0931-2668 ; 1742-4488
    DOI 10.1111/jbg.12649
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: [Measurement of Absorbed Dose in the Air in X-ray CT Examination Rooms Using a Special Protective Shield for CT].

    Komiya, Ryota / Ishitsuka, Reina / Ota, Joji / Higashida, Reona / Kawasaki, Tatsuya / Masuda, Yoshitada

    Nihon Hoshasen Gijutsu Gakkai zasshi

    2022  Volume 78, Issue 11, Page(s) 1341–1348

    Abstract: Purpose: X-ray CT examinations are required not only in routine medical examinations but also in various situations such as emergency medical care. Although medical staff may be exposed to radiation when assisting patients, the distribution of air- ... ...

    Abstract Purpose: X-ray CT examinations are required not only in routine medical examinations but also in various situations such as emergency medical care. Although medical staff may be exposed to radiation when assisting patients, the distribution of air-absorbed doses in the CT examination room when using a special protective shield for CT has not been clarified. Here, we measured air-absorbed doses at several points simultaneously to clarify the distribution of these doses and the effect of a special protective shield for CT in reducing them.
    Method: A human phantom was imaged with an X-ray CT system. The absorbed dose in the air dose profile distribution was measured with an OSL dosimeter in the presence and absence of a special protective shield for CT.
    Results: The highest air absorbed doses of 4.27 mGy were at 0 cm in the horizontal direction, 120 cm in the vertical direction, and 50 cm in the body axis direction. The largest reduction in air absorbed dose following installation of the special protective shield for CT was 91.7%, obtained at 0 cm in the horizontal direction, 150 cm in the vertical direction, and 50 cm in the body axis direction.
    Conclusion: A 91.7% reduction in air-absorbed dose was o directly behind the special protective shield for CT. The reduction in air-absorbed dose was 65.8% at the location of a gap between the special protective shield for CT and gantry.
    MeSH term(s) Humans ; Radiation Dosage ; Radiation Protection/methods ; X-Rays ; Tomography, X-Ray Computed/methods ; Phantoms, Imaging
    Language Japanese
    Publishing date 2022-10-24
    Publishing country Japan
    Document type English Abstract ; Journal Article
    ZDB-ID 2269092-X
    ISSN 1881-4883 ; 0369-4305
    ISSN (online) 1881-4883
    ISSN 0369-4305
    DOI 10.6009/jjrt.2022-1313
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: PHANTOM STUDY OF THE ENTRANCE SURFACE DOSE OF A NEW CT SCOUT ACQUISITION THAT ALSO SERVES AS A TUBE WARM-UP.

    Ota, Joji / Yokota, Hajime / Higashida, Reona / Komiya, Ryota / Kawakami, Yuya / Chida, Koichi / Masuda, Yoshitada / Uno, Takashi

    Radiation protection dosimetry

    2022  Volume 198, Issue 6, Page(s) 334–338

    Abstract: We determined the effect of a new scout image acquisition technique ('smart scout'), which also serves as a tube warm-up, on radiation dose and automatic exposure control (AEC) mA settings. The entrance surface dose (ESD) of a chest phantom with and ... ...

    Abstract We determined the effect of a new scout image acquisition technique ('smart scout'), which also serves as a tube warm-up, on radiation dose and automatic exposure control (AEC) mA settings. The entrance surface dose (ESD) of a chest phantom with and without the smart scout was measured. A conical AEC phantom was scanned in the setting for abdominal CT, and AEC curves were generated. ESD when the smart scout was not used was 0.75 mGy at 120 kV, 50 mA. ESD when using the smart scout was 0.24 mGy for a body habitus setting of 'Less', 0.54 mGy for 'Moderate' and 0.95 mGy for 'More'. When the diameter of the subject was ≥32 cm, the mA setting became lower in 'Less'. The smart scout reduced exposure at the 'Less' and Moderate' settings compared to the conventional scout scan.
    MeSH term(s) Abdomen ; Phantoms, Imaging ; Radiation Dosage ; Thorax ; Tomography, X-Ray Computed/methods
    Language English
    Publishing date 2022-04-21
    Publishing country England
    Document type Journal Article
    ZDB-ID 225912-6
    ISSN 1742-3406 ; 0144-8420
    ISSN (online) 1742-3406
    ISSN 0144-8420
    DOI 10.1093/rpd/ncac057
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: [Visualization of Contaminated Areas in the Inspection Room by CT Imaging Assuming COVID-19].

    Kawakami, Yuya / Ota, Joji / Irie, Ryosuke / Komiya, Ryota / Inoue, Aki / Yamagishi, Yosiki / Masuda, Yoshitada

    Nihon Hoshasen Gijutsu Gakkai zasshi

    2020  Volume 76, Issue 10, Page(s) 1080–1085

    MeSH term(s) Betacoronavirus ; COVID-19 ; Coronavirus Infections ; Humans ; Pandemics ; Pneumonia, Viral ; SARS-CoV-2 ; Tomography, X-Ray Computed
    Keywords covid19
    Language Japanese
    Publishing date 2020-10-21
    Publishing country Japan
    Document type Journal Article
    ZDB-ID 2269092-X
    ISSN 1881-4883 ; 0369-4305
    ISSN (online) 1881-4883
    ISSN 0369-4305
    DOI 10.6009/jjrt.2020_JSRT_76.10.1080
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: [Visualization of Contaminated Areas in the Inspection Room by CT Imaging Assuming COVID-19]

    Kawakami, Yuya / Ota, Joji / Irie, Ryosuke / Komiya, Ryota / Inoue, Aki / Yamagishi, Yosiki / Masuda, Yoshitada

    Nihon Hoshasen Gijutsu Gakkai Zasshi

    Keywords covid19
    Publisher WHO
    Document type Article
    Note WHO #Covidence: #874835
    Database COVID19

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