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  1. Artikel: Connectome-driven neural inventory of a complete visual system.

    Nern, Aljoscha / Loesche, Frank / Takemura, Shin-Ya / Burnett, Laura E / Dreher, Marisa / Gruntman, Eyal / Hoeller, Judith / Huang, Gary B / Januszewski, Michal / Klapoetke, Nathan C / Koskela, Sanna / Longden, Kit D / Lu, Zhiyuan / Preibisch, Stephan / Qiu, Wei / Rogers, Edward M / Seenivasan, Pavithraa / Zhao, Arthur / Bogovic, John /
    Canino, Brandon S / Clements, Jody / Cook, Michael / Finley-May, Samantha / Flynn, Miriam A / Fragniere, Alexandra Mc / Hameed, Imran / Hayworth, Kenneth J / Hopkins, Gary Patrick / Hubbard, Philip M / Katz, William T / Kovalyak, Julie / Lauchie, Shirley A / Leonard, Meghan / Lohff, Alanna / Maldonado, Charli A / Mooney, Caroline / Okeoma, Nneoma / Olbris, Donald J / Ordish, Christopher / Paterson, Tyler / Phillips, Emily M / Pietzsch, Tobias / Rivas Salinas, Jennifer / Rivlin, Patricia K / Schlegel, Philipp / Scott, Ashley L / Scuderi, Louis A / Takemura, Satoko / Talebi, Iris / Thomson, Alexander / Trautman, Eric T / Umayam, Lowell / Walsh, Claire / Walsh, John J / Xu, C Shan / Yakal, Emily A / Yang, Tansy / Zhao, Ting / Funke, Jan / George, Reed / Hess, Harald F / Jefferis, Gregory S X E / Knecht, Christopher / Korff, Wyatt / Plaza, Stephen M / Romani, Sandro / Saalfeld, Stephan / Scheffer, Louis K / Berg, Stuart / Rubin, Gerald M / Reiser, Michael B

    bioRxiv : the preprint server for biology

    2024  

    Abstract: Vision provides animals with detailed information about their surroundings, conveying diverse features such as color, form, and movement across the visual scene. Computing these parallel spatial features requires a large and diverse network of neurons, ... ...

    Abstract Vision provides animals with detailed information about their surroundings, conveying diverse features such as color, form, and movement across the visual scene. Computing these parallel spatial features requires a large and diverse network of neurons, such that in animals as distant as flies and humans, visual regions comprise half the brain's volume. These visual brain regions often reveal remarkable structure-function relationships, with neurons organized along spatial maps with shapes that directly relate to their roles in visual processing. To unravel the stunning diversity of a complex visual system, a careful mapping of the neural architecture matched to tools for targeted exploration of that circuitry is essential. Here, we report a new connectome of the right optic lobe from a male Drosophila central nervous system FIB-SEM volume and a comprehensive inventory of the fly's visual neurons. We developed a computational framework to quantify the anatomy of visual neurons, establishing a basis for interpreting how their shapes relate to spatial vision. By integrating this analysis with connectivity information, neurotransmitter identity, and expert curation, we classified the ~53,000 neurons into 727 types, about half of which are systematically described and named for the first time. Finally, we share an extensive collection of split-GAL4 lines matched to our neuron type catalog. Together, this comprehensive set of tools and data unlock new possibilities for systematic investigations of vision in Drosophila, a foundation for a deeper understanding of sensory processing.
    Sprache Englisch
    Erscheinungsdatum 2024-06-01
    Erscheinungsland United States
    Dokumenttyp Preprint
    DOI 10.1101/2024.04.16.589741
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  2. Artikel ; Online: Comparisons between the ON- and OFF-edge motion pathways in the

    Shinomiya, Kazunori / Huang, Gary / Lu, Zhiyuan / Parag, Toufiq / Xu, C Shan / Aniceto, Roxanne / Ansari, Namra / Cheatham, Natasha / Lauchie, Shirley / Neace, Erika / Ogundeyi, Omotara / Ordish, Christopher / Peel, David / Shinomiya, Aya / Smith, Claire / Takemura, Satoko / Talebi, Iris / Rivlin, Patricia K / Nern, Aljoscha /
    Scheffer, Louis K / Plaza, Stephen M / Meinertzhagen, Ian A

    eLife

    2019  Band 8

    Abstract: Understanding the circuit mechanisms behind motion detection is a long-standing question in visual neuroscience. ... ...

    Abstract Understanding the circuit mechanisms behind motion detection is a long-standing question in visual neuroscience. In
    Mesh-Begriff(e) Animals ; Brain/physiology ; Connectome ; Crosses, Genetic ; Dendrites/metabolism ; Drosophila melanogaster/physiology ; Female ; Homozygote ; Image Processing, Computer-Assisted/methods ; Models, Neurological ; Motion Perception ; Neurons/metabolism ; Optic Lobe, Nonmammalian/physiology ; Photoreceptor Cells, Invertebrate/physiology ; Synapses/physiology
    Sprache Englisch
    Erscheinungsdatum 2019-01-09
    Erscheinungsland England
    Dokumenttyp Comparative Study ; Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2687154-3
    ISSN 2050-084X ; 2050-084X
    ISSN (online) 2050-084X
    ISSN 2050-084X
    DOI 10.7554/eLife.40025
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  3. Artikel ; Online: A connectome of a learning and memory center in the adult

    Takemura, Shin-Ya / Aso, Yoshinori / Hige, Toshihide / Wong, Allan / Lu, Zhiyuan / Xu, C Shan / Rivlin, Patricia K / Hess, Harald / Zhao, Ting / Parag, Toufiq / Berg, Stuart / Huang, Gary / Katz, William / Olbris, Donald J / Plaza, Stephen / Umayam, Lowell / Aniceto, Roxanne / Chang, Lei-Ann / Lauchie, Shirley /
    Ogundeyi, Omotara / Ordish, Christopher / Shinomiya, Aya / Sigmund, Christopher / Takemura, Satoko / Tran, Julie / Turner, Glenn C / Rubin, Gerald M / Scheffer, Louis K

    eLife

    2017  Band 6

    Abstract: Understanding memory formation, storage and retrieval requires knowledge of the underlying neuronal circuits. ... ...

    Abstract Understanding memory formation, storage and retrieval requires knowledge of the underlying neuronal circuits. In
    Sprache Englisch
    Erscheinungsdatum 2017-07-18
    Erscheinungsland England
    Dokumenttyp Journal Article
    ZDB-ID 2687154-3
    ISSN 2050-084X ; 2050-084X
    ISSN (online) 2050-084X
    ISSN 2050-084X
    DOI 10.7554/eLife.26975
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  4. Artikel ; Online: A connectome and analysis of the adult

    Scheffer, Louis K / Xu, C Shan / Januszewski, Michal / Lu, Zhiyuan / Takemura, Shin-Ya / Hayworth, Kenneth J / Huang, Gary B / Shinomiya, Kazunori / Maitlin-Shepard, Jeremy / Berg, Stuart / Clements, Jody / Hubbard, Philip M / Katz, William T / Umayam, Lowell / Zhao, Ting / Ackerman, David / Blakely, Tim / Bogovic, John / Dolafi, Tom /
    Kainmueller, Dagmar / Kawase, Takashi / Khairy, Khaled A / Leavitt, Laramie / Li, Peter H / Lindsey, Larry / Neubarth, Nicole / Olbris, Donald J / Otsuna, Hideo / Trautman, Eric T / Ito, Masayoshi / Bates, Alexander S / Goldammer, Jens / Wolff, Tanya / Svirskas, Robert / Schlegel, Philipp / Neace, Erika / Knecht, Christopher J / Alvarado, Chelsea X / Bailey, Dennis A / Ballinger, Samantha / Borycz, Jolanta A / Canino, Brandon S / Cheatham, Natasha / Cook, Michael / Dreher, Marisa / Duclos, Octave / Eubanks, Bryon / Fairbanks, Kelli / Finley, Samantha / Forknall, Nora / Francis, Audrey / Hopkins, Gary Patrick / Joyce, Emily M / Kim, SungJin / Kirk, Nicole A / Kovalyak, Julie / Lauchie, Shirley A / Lohff, Alanna / Maldonado, Charli / Manley, Emily A / McLin, Sari / Mooney, Caroline / Ndama, Miatta / Ogundeyi, Omotara / Okeoma, Nneoma / Ordish, Christopher / Padilla, Nicholas / Patrick, Christopher M / Paterson, Tyler / Phillips, Elliott E / Phillips, Emily M / Rampally, Neha / Ribeiro, Caitlin / Robertson, Madelaine K / Rymer, Jon Thomson / Ryan, Sean M / Sammons, Megan / Scott, Anne K / Scott, Ashley L / Shinomiya, Aya / Smith, Claire / Smith, Kelsey / Smith, Natalie L / Sobeski, Margaret A / Suleiman, Alia / Swift, Jackie / Takemura, Satoko / Talebi, Iris / Tarnogorska, Dorota / Tenshaw, Emily / Tokhi, Temour / Walsh, John J / Yang, Tansy / Horne, Jane Anne / Li, Feng / Parekh, Ruchi / Rivlin, Patricia K / Jayaraman, Vivek / Costa, Marta / Jefferis, Gregory Sxe / Ito, Kei / Saalfeld, Stephan / George, Reed / Meinertzhagen, Ian A / Rubin, Gerald M / Hess, Harald F / Jain, Viren / Plaza, Stephen M

    eLife

    2020  Band 9

    Abstract: The neural circuits responsible for animal behavior remain largely unknown. We summarize new methods and present the circuitry of a large fraction of the brain of the fruit ... ...

    Abstract The neural circuits responsible for animal behavior remain largely unknown. We summarize new methods and present the circuitry of a large fraction of the brain of the fruit fly
    Mesh-Begriff(e) Animals ; Brain/physiology ; Connectome/methods ; Drosophila melanogaster/physiology ; Female ; Male ; Neurons/physiology ; Synapses/physiology
    Sprache Englisch
    Erscheinungsdatum 2020-09-07
    Erscheinungsland England
    Dokumenttyp Journal Article ; Research Support, Non-U.S. Gov't ; Systematic Review
    ZDB-ID 2687154-3
    ISSN 2050-084X ; 2050-084X
    ISSN (online) 2050-084X
    ISSN 2050-084X
    DOI 10.7554/eLife.57443
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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